Contig 008161:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L05Sequence605000033 (7)emb|CDP04035.1|3e-53unnamed protein product [Coffea canephora]718008161 (11)ref|XP_011089543.1|1e-74PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF011C14Sequence581008161 (11)gb|KJB26283.1|1e-95hypothetical protein B456_004G235100 [Gossypium raimondii]689008161 (11)ref|XP_009777101.1|7e-91PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMFF015J14Sequence537000033 (7)ref|XP_011089543.1|8e-104PREDICTED: root phototropism protein 2-like [Sesamum indicum]682008161 (11)ref|XP_009777101.1|5e-91PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMFF019D10Sequence565000033 (7)ref|XP_011089543.1|6e-93PREDICTED: root phototropism protein 2-like [Sesamum indicum]709008161 (11)ref|XP_011089543.1|5e-97PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF019K15Sequence572000033 (7)ref|XP_011089543.1|5e-94PREDICTED: root phototropism protein 2-like [Sesamum indicum]765008161 (11)ref|XP_011089543.1|1e-109PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF030L20Sequence185000033 (7)emb|CDP04035.1|3e-15unnamed protein product [Coffea canephora]743008161 (11)ref|XP_011089543.1|8e-106PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMFF034D23Sequence437000033 (7)emb|CDP04035.1|1e-78unnamed protein product [Coffea canephora]553008161 (11)ref|XP_009777101.1|1e-60PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMFF040K19Sequence686008161 (11)ref|XP_009777101.1|5e-92PREDICTED: root phototropism protein 2 [Nicotiana sylvestris]
JMFN035G08Sequence628008161 (11)ref|XP_011089543.1|2e-128PREDICTED: root phototropism protein 2-like [Sesamum indicum]
JMSF044N08Sequence727000033 (7)ref|XP_011089543.1|3e-130PREDICTED: root phototropism protein 2-like [Sesamum indicum]721008161 (11)ref|XP_011089543.1|1e-103PREDICTED: root phototropism protein 2-like [Sesamum indicum]

Alignment

This contig is upended


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JMFN035G08-                                              GCGGCGTTTCCGATCAACTTCCTGT
                      ____________________________________________________________
consensus                                                GCGGCGTTTCCGATCAACTTCCTGT
 
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JMFN035G08-           GTTGTCTCCTCAGAACGGCCATCTTCCTCAGAACCGCCACCGGCTGCAAGAACGAGCTGG
                      ____________________________________________________________
consensus             GTTGTCTCCTCAGAACGGCCATCTTCCTCAGAACCGCCACCGGCTGCAAGAACGAGCTGG
 
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JMFN035G08-           AGAAGAGGATATCGACGATCCTCGAGCACGTGACGGTGGACGACCTTCTGGTGTTGTCGT
                      ____________________________________________________________
consensus             AGAAGAGGATATCGACGATCCTCGAGCACGTGACGGTGGACGACCTTCTGGTGTTGTCGT
 
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JMFN035G08-           TCACCTTCGACGGCGAGAGGCTGTTCGATTTGGAGAGCGTGCGGAGGATTATCTCCGGGT
                      ____________________________________________________________
consensus             TCACCTTCGACGGCGAGAGGCTGTTCGATTTGGAGAGCGTGCGGAGGATTATCTCCGGGT
 
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JMFN035G08-           TTGTGGAGAAAGAGAAGAGCGTGGCGGTGTTTAACGGCGGCGACTTTAGAGAAGTTTGCT
JMFF011C14-                                                   CGACTTTAGAGAAGTTTGCT
                      ____________________________________________________________
consensus             TTGTGGAGAAAGAGAAGAGCGTGGCGGTGTTTAACGGCGGCGACTTTAGAGAAGTTTGCT
 
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JMFN035G08-           CGACGGCGATGCAGAGAGTTGGCAAGACCGTCGATGCTTATCTCGGCGAGATTGCCACCC
JMFF011C14-           CGACGGCGATGCAGAGAGTTGGCAAGACCGTCGATGCTTATCTCGGCGAGATTGCCACCC
rJMFF030L20+                                                     CGGCGAGATTGCCACCC
rJMFF019K15+                                       GTCGATGCTTATCTCGGCGAGATTGCCACCC
                      ____________________________________________________________
consensus             CGACGGCGATGCAGAGAGTTGGCAAGACCGTCGATGCTTATCTCGGCGAGATTGCCACCC
 
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JMFN035G08-           ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCCTAAGGGTGCAA
JMFF011C14-           ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCCTAAGGGTGCAA
rJMSF044N08+          ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCCTAAGGGTGCAA
rJMFF030L20+          ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCNTAAGGGTGCAA
rJMFF019D10+                                   TAATGGAATTGCAAATTTAGTCCNTAAGGGTGCAA
rJMFF019K15+          ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCNTAAGGGTGCAA
rJMFF015J14+                                                              GGGTGCAA
rJMFF011C14+                                                          CTAAGGGTGCAA
rJMFF040K19+                                                               GGTGCAA
                      ____________________________________________________________
consensus             ACGTTGAGCTCAGTATTTCCAAGTTTAATGGAATTGCAAATTTAGTCCCTAAGGGTGCAA
 
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JMFN035G08-           GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
JMFF011C14-           GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMSF044N08+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF030L20+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF019D10+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF019K15+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF015J14+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF011C14+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
rJMFF040K19+          GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
                      ____________________________________________________________
consensus             GAAAGGTTGATGATGATCTCTACAGAGCTATTGATATCTACTTAAAGGCTCATCCCCAGC
 
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JMFN035G08-           TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
JMFF011C14-           TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMSF044N08+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF030L20+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF019D10+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF019K15+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF015J14+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF011C14+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF040K19+          TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
rJMFF008L05+           CGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
                      ____________________________________________________________
consensus             TCGACGAGATCGAAAGAGAAAAGGTTTGCAGCGTAATGGATCCACTAAAACTCTCATACG
 
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JMFN035G08-           AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
JMFF011C14-           AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMSF044N08+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF030L20+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF019D10+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF019K15+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF015J14+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF011C14+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF034D23+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF040K19+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
rJMFF008L05+          AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
                      ____________________________________________________________
consensus             AAGCTAGGGTTCATGCTTCCCAGAACAAGCGTTTACCAGTGCAGATAGTCCTCCACGCCC
 
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JMFN035G08-           TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
JMFF011C14-           TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMSF044N08+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF030L20+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF019D10+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF019K15+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF015J14+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF011C14+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF034D23+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF040K19+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
rJMFF008L05+          TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
                      ____________________________________________________________
consensus             TATACTACGATCAGCTGAAAATCAGAAGCGGCGCGGAAGATCCAAAGAGCACCCCAAACG
 
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JMFN035G08-           CCA                                                         
JMFF011C14-           CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMSF044N08+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF030L20+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF019D10+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF019K15+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF015J14+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF011C14+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF034D23+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF040K19+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
rJMFF008L05+          CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
                      ____________________________________________________________
consensus             CCATTGCAACGAGGAACCAGTTGCAGGCGGACGTAACATTGGTGAAGGAGAACGAAGCTT
 
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JMFF011C14-           TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMSF044N08+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF030L20+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF019D10+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF019K15+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF015J14+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF011C14+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF034D23+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF040K19+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
rJMFF008L05+          TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGGGTA
                      ____________________________________________________________
consensus             TGCGAACGGAGCTATTGCAGATGAAGATGTTCATAGCCGATATGCAGAATAAGGGGAGTA
 
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JMFF011C14-           GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGTAAGCCGACGTTCTTTT
rJMSF044N08+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF030L20+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF019D10+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF019K15+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF015J14+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF011C14+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGTAAGCCGACGTTCTTTT
rJMFF034D23+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF040K19+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
rJMFF008L05+          GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
                      ____________________________________________________________
consensus             GTCAAGGGAGTTCGGTTAAAGGGAGTAGTGCGAGTGCTGTGAGGAAGCCGACGTTCTTTT
 
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JMFF011C14-           CGTCTATGTCTAA                                               
rJMSF044N08+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF030L20+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF019D10+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF019K15+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF015J14+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF011C14+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF034D23+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF040K19+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
rJMFF008L05+          CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
                      ____________________________________________________________
consensus             CGTCTATGTCTAAGAAGTTGGGGAAGTTGAATCCTTTCAAGCACGGATCTAAGGACACTT
 
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rJMSF044N08+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF030L20+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF019D10+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF019K15+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF015J14+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGCAGATTCTCCATTT
rJMFF011C14+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF034D23+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF040K19+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
rJMFF008L05+          CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
                      ____________________________________________________________
consensus             CGAATTTGGATGATGGTGAGGTGGATATTACCAAGCCTAGGAGAAGGAGATTCTCCATTT
 
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rJMSF044N08+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF030L20+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF019D10+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF019K15+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF015J14+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF011C14+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF034D23+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF040K19+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
rJMFF008L05+          CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
                      ____________________________________________________________
consensus             CTTAATTGAAATGTATGTATGGTTAGTTGCTTAGGTTGTGGTGTGTGATTAAGGTTGTGC
 
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rJMSF044N08+          AGACGGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF030L20+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF019D10+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF019K15+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF015J14+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF011C14+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF034D23+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF040K19+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
rJMFF008L05+          AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
                      ____________________________________________________________
consensus             AGA-GGTTTGTTAGTATTATTTTTTTAATTTGTTGCATTTGGATTGGATTGGATTTTATT
 
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rJMSF044N08+          G                                                           
rJMFF030L20+          GTGACAC                                                     
rJMFF019D10+          GTGACACTTTTACTA                                             
rJMFF019K15+          GTGACACTTTTACTA                                             
rJMFF015J14+          GTGACACTTTTACTA                                             
rJMFF011C14+          GTGACACTTTTACTA                                             
rJMFF034D23+          GTGACACTTTTACT                                              
rJMFF040K19+          GTGACACTTTTACTA                                             
rJMFF008L05+          GTGACACTTTTACTATTAATTAAATTATTGTTGTTCTCAAAATGTTGAATCTCCAACTCC
                      ____________________________________________________________
consensus             GTGACACTTTTACTATTAATTAAATTATTGTTGTTCTCAAAATGTTGAATCTCCAACTCC
 
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rJMFF008L05+          AAAAATTCAATAGAGCATATGAGAGAATGTAAATCTTGGTAACTCAGCTGAATACATATT
                      ____________________________________________________________
consensus             AAAAATTCAATAGAGCATATGAGAGAATGTAAATCTTGGTAACTCAGCTGAATACATATT