| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008H10 | Sequence | 596 | 000810 (4) | ref|XP_009804329.1| | 7e-69 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris] | 600 | 008157 (3) | ref|XP_009593440.1| | 3e-63 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis] |
| JMSF029P07 | Sequence | 680 | 000810 (4) | ref|XP_009804329.1| | 9e-73 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris] | 741 | 008157 (3) | ref|XP_009593440.1| | 3e-95 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis] |
| JMSF047H19 | Sequence | 717 | 000810 (4) | ref|XP_009804329.1| | 2e-87 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris] | 691 | 008157 (3) | ref|XP_009593440.1| | 2e-80 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF029P07+ AACTTCTGTACTATACTCCCATGGCTATCCTCGCCTCGA
____________________________________________________________
consensus AACTTCTGTACTATACTCCCATGGCTATCCTCGCCTCGA
. : . : . : . : . : . :
rJMSF047H19+ TCCGCGCTTCCTGGATTGATTGATCTTCAAGGGGCTTACCATATCTGGAAGG
rJMSF029P07+ TTATCTTATCCGCGCTTCCTGGATTGATTGATCTTCAAGGGGCTTACCATATCTGGAAGG
____________________________________________________________
consensus TTATCTTATCCGCGCTTCCTGGATTGATTGATCTTCAAGGGGCTTACCATATCTGGAAGG
. : . : . : . : . : . :
rJMSF047H19+ TGGACAAGGCAGATTTCCTAGTCTGCATTGGCGCATTCCTTGGAGTCCTGTTTGGCTCTG
rJMSF029P07+ TGGACAAGGCAGATTTCCTAGTCTGCATTGGCGCATTCCTTGGAGTCCTGTTNGGCTCTG
____________________________________________________________
consensus TGGACAAGGCAGATTTCCTAGTCTGCATTGGCGCATTCCTTGGAGTCCTGTTTGGCTCTG
. : . : . : . : . : . :
rJMSF047H19+ TCGAAATAGGCCTTCTAGTCGCGGTTGCTACTTCATTTGCCAAAATAATACTGGATTCCN
rJMSF029P07+ TCGAAATAGGCCTTCTAGTCGCGGTTGCTACTTCATTTGCCAAAATAATACTGGATTCCA
rJMFF008H10+ AATAGGCCTTCTAGTCGCGGTTGCTACTTCATTTGCCAAAATAATNCTGGATTCCA
____________________________________________________________
consensus TCGAAATAGGCCTTCTAGTCGCGGTTGCTACTTCATTTGCCAAAATAATACTGGATTCCA
. : . : . : . : . : . :
rJMSF047H19+ TTAGGCCTAGTATAGATGGAATTGGAAAGCTTCCNGGGACNGACATNTTCTGTGAAATAA
rJMSF029P07+ TTAGGCCTAGTATAGATGGAATTGGAAAGCTTCCAGGGACAGACATCTTCTGTGAAATAA
rJMFF008H10+ TTAGGCCTAGTATAGATGGAATTGGAAAGCTTCCAGGGACAGACATCTTCTGTGAAATAA
____________________________________________________________
consensus TTAGGCCTAGTATAGATGGAATTGGAAAGCTTCCAGGGACAGACATCTTCTGTGAAATAA
. : . : . : . : . : . :
rJMSF047H19+ CTAAATACCCTGCTGCAACTACCNTTCCTGGCATCTTGATCATCAGAATCAACAATGGTT
rJMSF029P07+ CTAAATACCCTGCTGCAACTACCATTCCTGGCATCTTGATCATCAGAATCAACAATGGTT
rJMFF008H10+ CTAAATACCCTGCTGCAACTACCATTCCTGGCATCTTGATCATCAGAATCAACAATGGTT
____________________________________________________________
consensus CTAAATACCCTGCTGCAACTACCATTCCTGGCATCTTGATCATCAGAATCAACAATGGTT
. : . : . : . : . : . :
rJMSF047H19+ CTCTTTGTTTTGCAAATTCTCAATTCNTTAGAGAAAGGTTATTGAAGTGGGTTGAAAAAG
rJMSF029P07+ CTCTTTGTTTTGCAAATTCTCAATTCATTAGAGAAAGGTTATTGAAGTGGGTTGAAAAAG
rJMFF008H10+ CTCTTTGTTTTGCAAATTCTCAATTCATTAGAGAAAGGTTATTGAAGTGGGTTGAAAAAG
____________________________________________________________
consensus CTCTTTGTTTTGCAAATTCTCAATTCATTAGAGAAAGGTTATTGAAGTGGGTTGAAAAAG
. : . : . : . : . : . :
rJMSF047H19+ CTAATGCCTCNGAGAATGCCCNGACTGTAAGGGTATTGATNTTAGACNTGTNTAATGTAA
rJMSF029P07+ CTAATGCCTCAGAGAATGCCCAGACTGTAAGGGTATTGATCTTAGACATGTCTAATGTAA
rJMFF008H10+ CTAATGCCTCAGAGAATGCCCAGACTGTAAGGGTATTGATCTTAGACATGTCTAATGTAA
____________________________________________________________
consensus CTAATGCCTCAGAGAATGCCCAGACTGTAAGGGTATTGATCTTAGACATGTCTAATGTAA
. : . : . : . : . : . :
rJMSF047H19+ CAAATACNGATACNTCCGGAATTGTTGTGTTGGAAGAATTGTATAAGAAATTGGCTTCNC
rJMSF029P07+ CAAATACAGATACATCCGGAATTGTTGTGTTGGAAGAATTGTATAAGAAATTGGCTTCAC
rJMFF008H10+ CAAATACAGATACATCCGGAATTGTTGTGTTGGAAGAATTGTATAAGAAATTGGCTTCAC
____________________________________________________________
consensus CAAATACAGATACATCCGGAATTGTTGTGTTGGAAGAATTGTATAAGAAATTGGCTTCAC
. : . : . : . : . : . :
rJMSF047H19+ NGAACNCNCAATTAGCTATTGCCGGGCCTAGGTGGAAGGTGATTGAAAAATTAAAGAAAG
rJMSF029P07+ AGAACACACAATTAGCTATTGCCGGGCCTAGGTGGAAGGTGATTGAAAAATTAAAGAAAG
rJMFF008H10+ AGAACACACAATTAGCTATTGCCGGGCCTAGGTGGAAGGTGATTGAAAAATTAAAGAAAG
____________________________________________________________
consensus AGAACACACAATTAGCTATTGCCGGGCCTAGGTGGAAGGTGATTGAAAAATTAAAGAAAG
. : . : . : . : . : . :
rJMSF047H19+ CCNAAATTGTAGATAAACTTGGACGAGGATGTTTTTTTCTAACTATTGGCGACGCCGTCG
rJMSF029P07+ CCAAAATTGTAGATAAACTTGGACGAGGATGTTTTTTTCTAACTATTGGCGACGCCGTCG
rJMFF008H10+ CCAAAATTGTAGATAAACTTGGACGAGGATGTTTTTTTCTAACTATTGGCGACGCCGTCG
____________________________________________________________
consensus CCAAAATTGTAGATAAACTTGGACGAGGATGTTTTTTTCTAACTATTGGCGACGCCGTCG
. : . : . : . : . : . :
rJMSF047H19+ ATGCTTGCCTAGATTTTAAAATGGCTACTCATCNCGTTTGATGAAAGAATAATACTACGC
rJMSF029P07+ ATGCTTGCCTAGATTTTAAAATGGCTACTCATCACGTTTGATGAAAGAATAATACTACGC
rJMFF008H10+ ATGCTTGCCTAGATTTTAAAATGGCTACTCATCACGTTTGATGAAAGAATAATACTACGC
____________________________________________________________
consensus ATGCTTGCCTAGATTTTAAAATGGCTACTCATCACGTTTGATGAAAGAATAATACTACGC
. : . : . : . : . : . :
rJMSF047H19+ NTTTGTCTAAAAAAAAA
rJMSF029P07+ ATTTGTCTAAAAAAAAA
rJMFF008H10+ ATTTGTCTAAAAAAAAATTCTTAATTTTCTCTTCTGTTATGTCACTATTTAANGTAATAA
____________________________________________________________
consensus ATTTGTCTAAAAAAAAATTCTTAATTTTCTCTTCTGTTATGTCACTATTTAANGTAATAA