Contig 008156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F15Sequence338004476 (2)761008156 (2)emb|CDP14786.1|2e-98unnamed protein product [Coffea canephora]
JMFF036J22Sequence515004476 (2)emb|CBI21855.3|9e-04unnamed protein product [Vitis vinifera]713008156 (2)emb|CDP14786.1|3e-88unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF036J22+                                                                    GG
rJMFF008F15+                             ACCCCAGATACACCACCAGTGGTTTACTATTATTCGGGTGG
                      ____________________________________________________________
consensus                                ACCCCAGATACACCACCAGTGGTTTACTATTATTCGGGTGG
 
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rJMFF036J22+          CCTGAGACTGANCCTTAATCTATACGATTGTGGTAAAGTCTGCCTCAGCCTTTTGAACAC
rJMFF008F15+          CCTGAGACTGAACCNTAATCTATACGATTGTGGTAAAGTCTGCCTCAGCCTTTTGAACAC
                      ____________________________________________________________
consensus             CCTGAGACTGAACCTTAATCTATACGATTGTGGTAAAGTCTGCCTCAGCCTTTTGAACAC
 
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rJMFF036J22+          TTGGACTGGTAAGGGTACTGAAAAGTGGCAGCCGAATACATCAACCATGCTGCAAGTGTT
rJMFF008F15+          TTGGACTGGTAAGGGTACTGAAAAGTGGCAGCCGAATACATCAACCATGCTGCAAGTGTT
                      ____________________________________________________________
consensus             TTGGACTGGTAAGGGTACTGAAAAGTGGCAGCCGAATACATCAACCATGCTGCAAGTGTT
 
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rJMFF036J22+          GGTCTCTATACAAGGTTTAATTCTGAATGAAAATCCATTCTTCAATGAGCCTGGGTATGA
rJMFF008F15+          GGTCTCTATACAAGGTTTAATTCTGAATGAAAATCCATTCTTCAATGAGCCTGGGTATGA
                      ____________________________________________________________
consensus             GGTCTCTATACAAGGTTTAATTCTGAATGAAAATCCATTCTTCAATGAGCCTGGGTATGA
 
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rJMFF036J22+          ATCTAGTTATGTTGGTGCTGAGGGGGAGCGCAGATCCAAAGCTTACACTGAAAATGTTTT
rJMFF008F15+          ATCTAGTTATGTTGGTGCTGAGGGGGAGCGCAGATCCAAAGCTTACACTGAAAATGTTTT
                      ____________________________________________________________
consensus             ATCTAGTTATGTTGGTGCTGAGGGGGAGCGCAGATCCAAAGCTTACACTGAAAATGTTTT
 
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rJMFF036J22+          TATTATGTCTTTGAAAACAATGATGTATACCCTTAAAAGGCCTCCTAGGCATTTTGAAGA
rJMFF008F15+          TATTATGTCTTTGAAAACAATGATGTATACCCTTAAAAGGCCTCCTAGGCATTTTGAAGA
                      ____________________________________________________________
consensus             TATTATGTCTTTGAAAACAATGATGTATACCCTTAAAAGGCCTCCTAGGCATTTTGAAGA
 
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rJMFF036J22+          CCTTGTCGCCGGTCATTTTCACATCCATGCACATGATATCCTGTCAGCATGTAAAGCCTA
rJMFF008F15+          CCTTGTCGCCGGTCATTTTCACATCCATGCACATGATATCCTGTCAGCATGTAAAGCCTA
                      ____________________________________________________________
consensus             CCTTGTCGCCGGTCATTTTCACATCCATGCACATGATATCCTGTCAGCATGTAAAGCCTA
 
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rJMFF036J22+          CAAGGAGGGTGCACCGGTTGGTTTTGCTGACCGGGGAAAACCACCTGAGGGCGATAATGT
rJMFF008F15+          CAAGGAGGGTGCACCGGTTGGTTTTGCTGACCGGGGAAAACCACCTGAGGGCGATAATGT
                      ____________________________________________________________
consensus             CAAGGAGGGTGCACCGGTTGGTTTTGCTGACCGGGGAAAACCACCTGAGGGCGATAATGT
 
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rJMFF036J22+          CCCAGAACATGGTCGCACACGAGACTTCAAGGCAGCACTGACTAAAATTACAAATGTTCT
rJMFF008F15+          CCCAGAACATGGTCGCACACGAGACTTCAAGGCAGCACTGACTAAAATTACAAATGTTCT
                      ____________________________________________________________
consensus             CCCAGAACATGGTCGCACACGAGACTTCAAGGCAGCACTGACTAAAATTACAAATGTTCT
 
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rJMFF036J22+          TGTCTCGACCTTCACTAAATATGGGGTGAAGGACTGTGAGCAGTTCAGAATTACAGGCTG
rJMFF008F15+          TGTCTCGACCTTCACTAAATATGGGGTGAAGGACTGTGAGCAGTTCAGAATTACAGGCTG
                      ____________________________________________________________
consensus             TGTCTCGACCTTCACTAAATATGGGGTGAAGGACTGTGAGCAGTTCAGAATTACAGGCTG
 
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rJMFF036J22+          ATGTTGAGCTTATTGAGAGGGCGGGCTTGTTAGAGCTGATACATTGCGTTTAGGCATTTT
rJMFF008F15+          ATGTTGAGCTTATTGAGAGGGCGGGCTTGTTAGAGCTGATACATTGCGTTTAGGCATTTT
                      ____________________________________________________________
consensus             ATGTTGAGCTTATTGAGAGGGCGGGCTTGTTAGAGCTGATACATTGCGTTTAGGCATTTT
 
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rJMFF036J22+          AGTTCAGTTTTAAATTGCTCCTTGTTTCGTTGTATATACACCTTGTCTTTGACTGATATG
rJMFF008F15+          AGTTCAGTTTTAAATTGCTCCTTGTTTCGTTGTATATACACCTTGTCTTTGACTGATATG
                      ____________________________________________________________
consensus             AGTTCAGTTTTAAATTGCTCCTTGTTTCGTTGTATATACACCTTGTCTTTGACTGATATG
 
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rJMFF036J22+          TTTCTTCACATTAGTGACTTCAACTGATATGTTTCTTCATATTAGCAAGGA         
rJMFF008F15+          TTTCTTCACATTAGTGACTTCAACTGATATGTTTCTTCATATTAGCAAGGANTTTCAACA
                      ____________________________________________________________
consensus             TTTCTTCACATTAGTGACTTCAACTGATATGTTTCTTCATATTAGCAAGGANTTTCAACA