Contig 008151:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I13Sequence526008151 (6)ref|XP_009765884.1|1e-49PREDICTED: serine/arginine-rich splicing factor RSZ22A-like [Nicotiana sylvestr740008151 (6)ref|XP_006357055.1|3e-26PREDICTED: serine/arginine-rich splicing factor RSZ22-like isoform X1 [Solanum
JMFF007L13Sequence415008151 (6)ref|XP_009765884.1|9e-53PREDICTED: serine/arginine-rich splicing factor RSZ22A-like [Nicotiana sylvestr739008151 (6)ref|XP_006357055.1|4e-20PREDICTED: serine/arginine-rich splicing factor RSZ22-like isoform X1 [Solanum
JMSF041I13Sequence849008151 (6)ref|XP_009765884.1|6e-52PREDICTED: serine/arginine-rich splicing factor RSZ22A-like [Nicotiana sylvestr590008151 (6)ref|XP_009353338.1|5e-04PREDICTED: serine/arginine-rich splicing factor RSZ22-like isoform X2 [Pyrus x

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006I13- ATACATCCTCTCTGCGGTGGGCTAGGGTTT
JMFF007L13- ATACATCCTCTCTGCGGTGGGCTAGGGTTT
JMSF041I13- GGTCTCTCTCTCTTCATACATCCTCTCTGCGGTGGGCTAGGGTTT
                      ____________________________________________________________
consensus GGTCTCTCTCTCTTCATACATCCTCTCTGCGGTGGGCTAGGGTTT
 
. : . : . : . : . : . :
JMFF006I13- TGCGTTCAAATCTAGGGTTTCAGGTGTTTATTCGTGATGTCAAGAGTATATGTTGGAAAT
JMFF007L13- TGCGTTCAAATCTAGGGTTTCAGGTGTTTATTCGTGATGTCAAGAGTATATGTTGGAAAT
JMSF041I13- TGCGTTCAAATCTAGGGTTTCAGGTGTTTATTCGTGATGTCAAGAGTATATGTTGGAAAT
                      ____________________________________________________________
consensus TGCGTTCAAATCTAGGGTTTCAGGTGTTTATTCGTGATGTCAAGAGTATATGTTGGAAAT
 
. : . : . : . : . : . :
JMFF006I13- TTGGACCCTAGGGTCACTGTACGAGATCTTGAAGATGAGTTCCGTACCTTTGGAGTGATA
JMFF007L13- TTGGACCCTAGGGTCACTGAACGAGATCTTGAAGATGAGTTCCGTACCTTTGGAGTGATA
JMSF041I13- TTGGACCCTAGGGTCACTGAACGAGATCTTGAAGATGAGTTCCGTACCTTTGGAGTGATA
                      ____________________________________________________________
consensus TTGGACCCTAGGGTCACTGAACGAGATCTTGAAGATGAGTTCCGTACCTTTGGAGTGATA
 
. : . : . : . : . : . :
JMFF006I13- AGAAGTGTTTGGGTTGCAAGAAGGCCACCTGGTTATGCTTTTATCGATTTTGATGACCGA
JMFF007L13- AGAAGTGTTTGGGTTGCAAGAAGGCCACCTGGTTATGCTTTTATCGATTTTGATGACCGA
JMSF041I13- AGAAGTGTTTGGGTTGCAAGAAGGCCACCTGGTTATGCTTTTATCGATTTTGATGACCGA
rJMFF006I13+ GCAAGAAGGCCACCTGGTTATGCTTTTATCGATTTTGATGACCGA
rJMFF007L13+ TTATCGATTTTGATGACCGA
                      ____________________________________________________________
consensus AGAAGTGTTTGGGTTGCAAGAAGGCCACCTGGTTATGCTTTTATCGATTTTGATGACCGA
 
. : . : . : . : . : . :
JMFF006I13- AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
JMFF007L13- AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
JMSF041I13- AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
rJMFF006I13+ AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
rJMSF041I13+ TGAACTC
rJMFF007L13+ AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
                      ____________________________________________________________
consensus AGAGATGCACAGGATGCAATCCGGGAATTGGATGGTAAGAATGGTTGGAGAGTTGAACTC
 
. : . : . : . : . : . :
JMFF006I13- TCTCACAATTCCANAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
JMFF007L13- TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
JMSF041I13- TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
rJMFF006I13+ TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
rJMSF041I13+ TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
rJMFF007L13+ TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
                      ____________________________________________________________
consensus TCTCACAATTCCAGAGGTGGAGGTGGGGGACGTGGCGGTGGAGGAGGACGTGGTCGCTCT
 
. : . : . : . : . : . :
JMFF006I13- GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
JMFF007L13- GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAANCTGGTCATTTTGCACGTGAGTGC
JMSF041I13- GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
rJMFF006I13+ GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
rJMSF041I13+ GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
rJMFF007L13+ GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
                      ____________________________________________________________
consensus GGTGGTTCTGACTTGAAGTGCTATGAATGTGGCGAAGCTGGTCATTTTGCACGTGAGTGC
 
. : . : . : . : . : . :
JMFF006I13- CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCNCANTCGCAGCCCACCTANATATAGG
JMFF007L13- CGGCTCCGCGG
JMSF041I13- CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCGCAGTCGCAGCCCACCTAGATATAGG
rJMFF006I13+ CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCGCAGTCGCAGCCCACCTAGATATAGG
rJMSF041I13+ CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCGCAGTCGCAGCCCACCTAGATATAGG
rJMFF007L13+ CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCGCAGTCGCAGCCCACCTAGATATAGG
                      ____________________________________________________________
consensus CGGCTCCGCGGGGGTGGGGGTGCAGGAAGGCGTCGCAGTCGCAGCCCACCTAGATATAGG
 
. : . : . : . : . : . :
JMFF006I13- AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
JMSF041I13- AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
rJMFF006I13+ AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
rJMSF041I13+ AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
rJMFF007L13+ AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
                      ____________________________________________________________
consensus AGGAGCCCAAGTTATGGTCGAAGGAGTTACAGTCCTCGTGGTCGTTCCCCTCGTCGCCGC
 
. : . : . : . : . : . :
JMFF006I13- AGTGTGTCTCCTCGTG
JMSF041I13- AGTGTGTCTCCTCGTGGCCGTAGCTACAGCCGATCTCCTTACCGTGGACGGGATGAAGCT
rJMFF006I13+ AGTGTGTCTCCTCGTGGCCGTAGCTACAGCCGATCTCCTTACCGTGGACGGGATGAAGCT
rJMSF041I13+ AGTGTGTCTCCTCGTGGCCGTAGCTACAGCCGATCTCCTTACCGTGGACGGGATGAAGCT
rJMFF007L13+ AGTGTGTCTCCTCGTGGCCGTAGCTACAGCCGATCTCCTTACCGTGGACGGGATGAAGCT
                      ____________________________________________________________
consensus AGTGTGTCTCCTCGTGGCCGTAGCTACAGCCGATCTCCTTACCGTGGACGGGATGAAGCT
 
. : . : . : . : . : . :
JMSF041I13- GCTTATGCTAACGGAAATGGTCTCAGGGAACGACACAGAAGCAGGAGCTGAAGCAATGGA
rJMFF006I13+ GCTTATGCTAACGGAAATGGTCTCAGGGAACGACACAGAAGCAGGAGCTGAAGCAATGGA
rJMSF041I13+ GCTTATGCTAACGGAAATGGTCTCAGGGAACGACACAGAAGCAGGAGCTGAAGCAATGGA
rJMFF007L13+ GCTTATGCTAACGGAAATGGTCTCAGGGAACGACACAGAAGCAGGAGCTGAAGCAATGGA
                      ____________________________________________________________
consensus GCTTATGCTAACGGAAATGGTCTCAGGGAACGACACAGAAGCAGGAGCTGAAGCAATGGA
 
. : . : . : . : . : . :
JMSF041I13- ATATTGTTTCCAGATGCATTACCAAACATTTGGAATTGTGTTTTTACTTAGCTTGAACTA
rJMFF006I13+ ATATTGTTTCCAGATGCATTACCAAACATTTGGAATTGTGTTTTTACTTAGCTTGAACTA
rJMSF041I13+ ATATTGTTTCCAGATGCATTACCAAACATTTGGAATTGTGTTTTTACTTAGCTTGAACTA
rJMFF007L13+ ATATTGTTTCCAGATGCATTACCAAACATTTGGAATTGTGTTTTTACTTAGCTTGAACTA
                      ____________________________________________________________
consensus ATATTGTTTCCAGATGCATTACCAAACATTTGGAATTGTGTTTTTACTTAGCTTGAACTA
 
. : . : . : . : . : . :
JMSF041I13- GATCACAACTATGTAAGTGGGGCCACCATTTTGCTTCAACTGCTGGATTTGGTTAAGTTT
rJMFF006I13+ GATCACAACTATGTAAGTGGGGCCACCATTTTGCTTCAACTGCTGGATTTGGTTAAGTTT
rJMSF041I13+ GATCACAACTATGTAAGTGGGGCCACCATTTTGCTTCAACTGCTGGATTTGGTTAAGTTT
rJMFF007L13+ GATCACAACTATGTAAGTGGGGCCACCATTTTGCTTCAACTGCTGGATTTGGTTAAGTTT
                      ____________________________________________________________
consensus GATCACAACTATGTAAGTGGGGCCACCATTTTGCTTCAACTGCTGGATTTGGTTAAGTTT
 
. : . : . : . : . : . :
JMSF041I13- TCCTTTCTTTTGATACTAAGTGTATTGGCTTCATAGTATATGTTCCTTGCTGAACTTANT
rJMFF006I13+ TCCTTTCTTTTGATACTAAGTGTATTGGCTTCATAGTATATGTTCCTTGCTGAACTTAGT
rJMSF041I13+ TCCTTTCTTTTGATACTAAGTGTATTGGCTTCATAGTATATGTTCCTTGCTGAACTTAGT
rJMFF007L13+ TCCTTTCTTTTGATACTAAGTGTATTGGCTTCATAGTATATGTTCCTTGCTGAACTTAGT
                      ____________________________________________________________
consensus TCCTTTCTTTTGATACTAAGTGTATTGGCTTCATAGTATATGTTCCTTGCTGAACTTAGT
 
. : . : . : . : . : . :
JMSF041I13- A-TCTAGTTACTGTTGCTTTGAATT
rJMFF006I13+ A-TCTAGTTACTGTTGCTTTGAATTTTATAGACGATTGGATCTATGGTAGGTAATATTTT
rJMSF041I13+ ATTCTAGTTACTGTTGCTTTGAATTT
rJMFF007L13+ A-TCTAGTTACTGTTGCTTTGAATTTTATAGACGATTGGATCTATGGTAGGTAATATTTT
                      ____________________________________________________________
consensus A-TCTAGTTACTGTTGCTTTGAATTTTATAGACGATTGGATCTATGGTAGGTAATATTTT
 
. : . : . : . : . : . :
rJMFF006I13+ ATTGAGAAGAATATATCTCTAAAGACACTGCTAAAT
rJMFF007L13+ ATTGAGAAGAATATATCTCTAAAGACACTGCTAAATGTTTTTCTGTTTTTGTGCCGAGGT
                      ____________________________________________________________
consensus ATTGAGAAGAATATATCTCTAAAGACACTGCTAAATGTTTTTCTGTTTTTGTGCCGAGGT