Contig 008147:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H18Sequence511008147 (13)ref|XP_002272165.1|3e-63PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_750008147 (13)gb|KHG18085.1|3e-120putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF012E03Sequence436008147 (13)ref|XP_006356242.1|1e-44PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Solanum tuberosum]799008147 (13)gb|KHG18085.1|3e-132putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF013D17Sequence567008147 (13)ref|XP_011082241.1|7e-75PREDICTED: probable CCR4-associated factor 1 homolog 7 [Sesamum indicum]721008147 (13)gb|KHG18085.1|1e-119putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF019C24Sequence139014179746008147 (13)gb|KHG18085.1|2e-119putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF031L15Sequence511008147 (13)ref|XP_002272165.1|3e-63PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_732008147 (13)gb|KHG18085.1|2e-120putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMSF029K01Sequence661008147 (13)ref|XP_006356242.1|4e-92PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Solanum tuberosum]715008147 (13)ref|XP_002527306.1|6e-118ccr4-associated factor, putative [Ricinus communis] gb|EEF35058.1| ccr4-associat
JMSF038M19Sequence593008147 (13)ref|XP_002272165.1|7e-78PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_780008147 (13)gb|KJB68026.1|8e-100hypothetical protein B456_010G222500 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012E03- GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF031L15- GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF007H18- GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF013D17- GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMSF038M19- TTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMSF029K01- TTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
                      ____________________________________________________________
consensus GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
 
. : . : . : . : . : . :
JMFF012E03- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF031L15- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF007H18- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF013D17- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMSF038M19- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMSF029K01- TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
                      ____________________________________________________________
consensus TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
 
. : . : . : . : . : . :
JMFF012E03- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF031L15- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF007H18- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF013D17- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMSF038M19- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMSF029K01- CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
                      ____________________________________________________________
consensus CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
 
. : . : . : . : . : . :
JMFF012E03- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF031L15- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF007H18- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF013D17- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMSF038M19- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMSF029K01- GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
                      ____________________________________________________________
consensus GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
 
. : . : . : . : . : . :
JMFF012E03- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF031L15- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF007H18- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF013D17- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMSF038M19- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMSF029K01- ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
                      ____________________________________________________________
consensus ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
 
. : . : . : . : . : . :
JMFF012E03- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF031L15- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF007H18- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF013D17- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMSF038M19- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMSF029K01- GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
                      ____________________________________________________________
consensus GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
 
. : . : . : . : . : . :
JMFF012E03- GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF031L15- GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF007H18- GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF013D17- GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMSF038M19- GGGAATTTCAAGAACAGCAACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMSF029K01- GGGAATTTCAAGAACAGCAACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
rJMSF038M19+ TGAAGGATNATGTAGACATG
rJMFF012E03+ CCCTGAAGGATAATGTAGACATG
                      ____________________________________________________________
consensus GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
 
. : . : . : . : . : . :
JMFF012E03- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAG
JMFF031L15- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMFF007H18- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMFF013D17- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMSF038M19- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMSF029K01- TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMSF029K01+ AGGGAAACCTGCCAACCTGT
rJMFF031L15+ TTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMFF013D17+ TTTCAGACGAGAAGGGAAACNTGCCAACCTGT
rJMSF038M19+ TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCNACCTGT
rJMFF012E03+ TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMFF019C24+ TTTCAGACGAGAAGGGAAACNTGCCAACCTGT
rJMFF007H18+ TTTCAGACGAGAAGGGAAACCTGCCAACCTGT
                      ____________________________________________________________
consensus TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
 
. : . : . : . : . : . :
JMFF031L15- GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATC
JMFF007H18- GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATC
JMFF013D17- GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
JMSF038M19- GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
JMSF029K01- GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMSF029K01+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF031L15+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF013D17+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMSF038M19+ GGGACAGNCAAGTACTGCNTTTGGCAGNTCAANTTCCGGGAATTNGATCCCAANGAGGAT
rJMFF012E03+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF019C24+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF007H18+ GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
                      ____________________________________________________________
consensus GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
 
. : . : . : . : . : . :
JMFF013D17- GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATT
JMSF038M19- GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
JMSF029K01- GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMSF029K01+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF031L15+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF013D17+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMSF038M19+ GTTTTNGCGAGNGATTCCATCGAGNTGCTGCGGCAGTGTGGGANTGATTTCGAGAAGAAC
rJMFF012E03+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF019C24+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF007H18+ GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
                      ____________________________________________________________
consensus GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
 
. : . : . : . : . : . :
JMSF038M19- ACGGA
JMSF029K01- ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMSF029K01+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF031L15+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF013D17+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMSF038M19+ NCGGAGAGTGGGATCGAGGNGAGGAGATTTGGGGAGCTGTTGANGTCATCAGGGATTGTN
rJMFF012E03+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF019C24+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF007H18+ ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
                      ____________________________________________________________
consensus ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
 
. : . : . : . : . : . :
JMSF029K01- TTGANCGATAGCGTTCAC
rJMSF029K01+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF031L15+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF013D17+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMSF038M19+ TTGAACGATAGCGTTCACTGGGTGNCATTCCACAGNGGNTATGATTTNGGGTACCTNCTG
rJMFF012E03+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF019C24+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF007H18+ TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
                      ____________________________________________________________
consensus TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
 
. : . : . : . : . : . :
rJMSF029K01+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF031L15+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF013D17+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMSF038M19+ AAGATACNGNCNNGNCNGGAGTTGCCGGNNNCGCAGCAGGGGTTTTTTGCCCTNATCAAC
rJMFF012E03+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF019C24+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF007H18+ AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
                      ____________________________________________________________
consensus AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
 
. : . : . : . : . : . :
rJMSF029K01+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF031L15+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF013D17+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMSF038M19+ ANGTATTTCCCGGAGGTGTTTGNCATCAAGCACNTNATGAGGTTTTGCAACAGCCTCCAT
rJMFF012E03+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF019C24+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF007H18+ ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
                      ____________________________________________________________
consensus ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
 
. : . : . : . : . : . :
rJMSF029K01+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF031L15+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF013D17+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMSF038M19+ GGTNGGTNGAACAAGCTNGCGGANCTGTTGGAAGTGGAGAGAGTGGGNGTCNGCCATCAA
rJMFF012E03+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF019C24+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF007H18+ GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
                      ____________________________________________________________
consensus GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
 
. : . : . : . : . : . :
rJMSF029K01+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF031L15+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF013D17+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMSF038M19+ GCCGGCTCGGATAGCTTGNTCNNTGNTTGTACCTTCAGGAAGNTGAAAGACAACTTCTTT
rJMFF012E03+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF019C24+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF007H18+ GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
                      ____________________________________________________________
consensus GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
 
. : . : . : . : . : . :
rJMSF029K01+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF031L15+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF013D17+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMSF038M19+ AGTGGCTCACTGGAGGAGTANTNTGGTGTCTTGTATGGTNTAGGCGTTGAGAATGGACAG
rJMFF012E03+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF019C24+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF007H18+ AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
                      ____________________________________________________________
consensus AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
 
. : . : . : . : . : . :
rJMSF029K01+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAAACAAAAAAAC
rJMFF031L15+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF013D17+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMSF038M19+ NATAGCAGCAGCAGCAGCACGCTATTGTTGACCTACAAAAACNAAAAAAACNAAAAAACA
rJMFF012E03+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF019C24+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF007H18+ AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
                      ____________________________________________________________
consensus AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
 
. : . : . : . : . : . :
rJMSF029K01+ AAAAACCAAAATTGTGACAGTATAGGTGATGTGATGTGACGTGTGCGCTTCAAGGTTGCA
rJMFF031L15+ AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF013D17+ AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMSF038M19+ AAAACCAANAGTTGTGNCAGTATAGGTNATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF012E03+ AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF019C24+ AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF007H18+ AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
                      ____________________________________________________________
consensus AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
 
. : . : . : . : . : . :
rJMSF029K01+ TCTGTATACACACACACTAATTCAAAAATGTTTGT
rJMFF031L15+ TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTAT
rJMFF013D17+ TCTGTATACACACACACTAATTCAAAAATGT
rJMSF038M19+ TCTGTATACACACNCANTAANTCAAAAATGTTTG
rJMFF012E03+ TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAA
rJMFF019C24+ TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAA
rJMFF007H18+ TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAATCTC
                      ____________________________________________________________
consensus TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAATCTC