Contig 008147:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H18Sequence511008147 (13)ref|XP_002272165.1|3e-63PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_750008147 (13)gb|KHG18085.1|3e-120putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF012E03Sequence436008147 (13)ref|XP_006356242.1|1e-44PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Solanum tuberosum]799008147 (13)gb|KHG18085.1|3e-132putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF013D17Sequence567008147 (13)ref|XP_011082241.1|7e-75PREDICTED: probable CCR4-associated factor 1 homolog 7 [Sesamum indicum]721008147 (13)gb|KHG18085.1|1e-119putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF019C24Sequence139014179746008147 (13)gb|KHG18085.1|2e-119putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMFF031L15Sequence511008147 (13)ref|XP_002272165.1|3e-63PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_732008147 (13)gb|KHG18085.1|2e-120putative CCR4-associated factor 1 -like protein [Gossypium arboreum]
JMSF029K01Sequence661008147 (13)ref|XP_006356242.1|4e-92PREDICTED: probable CCR4-associated factor 1 homolog 7-like [Solanum tuberosum]715008147 (13)ref|XP_002527306.1|6e-118ccr4-associated factor, putative [Ricinus communis] gb|EEF35058.1| ccr4-associat
JMSF038M19Sequence593008147 (13)ref|XP_002272165.1|7e-78PREDICTED: probable CCR4-associated factor 1 homolog 7 [Vitis vinifera] ref|XP_780008147 (13)gb|KJB68026.1|8e-100hypothetical protein B456_010G222500 [Gossypium raimondii]

Alignment

This contig is upended


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JMFF012E03-                             GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF031L15-                             GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF007H18-                             GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMFF013D17-                             GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMSF038M19-                               TTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
JMSF029K01-                               TTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
                      ____________________________________________________________
consensus                               GGTTTCCTCTCCTTTCTTATCCCATTTCGCCGCCTCGTTAAT
 
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JMFF012E03-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF031L15-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF007H18-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMFF013D17-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMSF038M19-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
JMSF029K01-           TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
                      ____________________________________________________________
consensus             TCCCATTTCAAACCCTAACATCCCTTCCCGTTTTCTGGAAACAAACGTCCATTTACGGTT
 
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JMFF012E03-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF031L15-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF007H18-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMFF013D17-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMSF038M19-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
JMSF029K01-           CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
                      ____________________________________________________________
consensus             CAAAGCTCAGAACTTTTTGGATTTTCGCTGCGGGTTGAAAAAATTTTTGTGAGAGAATCG
 
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JMFF012E03-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF031L15-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF007H18-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMFF013D17-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMSF038M19-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
JMSF029K01-           GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
                      ____________________________________________________________
consensus             GAATAGAAATTTTGGGTTGATTGGAAGATGTCGCTTTTGCCAAAAAGCGATTCGATTCAG
 
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JMFF012E03-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF031L15-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF007H18-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMFF013D17-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMSF038M19-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
JMSF029K01-           ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
                      ____________________________________________________________
consensus             ATTAGAGAAGTGTGGGATTATAACCTGGAAGAAGAGTTTGATCTGATCAGAGAAGTCGTA
 
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JMFF012E03-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF031L15-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF007H18-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMFF013D17-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMSF038M19-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
JMSF029K01-           GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
                      ____________________________________________________________
consensus             GACGATTACCCGTTTATTGCGATGGATACGGAGTTTCCGGGCATTGTTCTACGGCCGGTG
 
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JMFF012E03-           GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF031L15-           GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF007H18-           GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMFF013D17-           GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMSF038M19-           GGGAATTTCAAGAACAGCAACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
JMSF029K01-           GGGAATTTCAAGAACAGCAACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
rJMSF038M19+                                                  TGAAGGATNATGTAGACATG
rJMFF012E03+                                               CCCTGAAGGATAATGTAGACATG
                      ____________________________________________________________
consensus             GGGAATTTCAAGAACAGCGACGATTACCATTACCAGACCCTGAAGGATAATGTAGACATG
 
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JMFF012E03-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAG                          
JMFF031L15-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMFF007H18-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMFF013D17-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMSF038M19-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
JMSF029K01-           TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMSF029K01+                                                  AGGGAAACCTGCCAACCTGT
rJMFF031L15+                                      TTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMFF013D17+                                      TTTCAGACGAGAAGGGAAACNTGCCAACCTGT
rJMSF038M19+          TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCNACCTGT
rJMFF012E03+          TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
rJMFF019C24+                                      TTTCAGACGAGAAGGGAAACNTGCCAACCTGT
rJMFF007H18+                                      TTTCAGACGAGAAGGGAAACCTGCCAACCTGT
                      ____________________________________________________________
consensus             TTAAAGTTGATACAACTGGGGCTAACCTTTTCAGACGAGAAGGGAAACCTGCCAACCTGT
 
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JMFF031L15-           GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATC           
JMFF007H18-           GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATC           
JMFF013D17-           GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
JMSF038M19-           GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
JMSF029K01-           GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMSF029K01+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF031L15+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF013D17+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMSF038M19+          GGGACAGNCAAGTACTGCNTTTGGCAGNTCAANTTCCGGGAATTNGATCCCAANGAGGAT
rJMFF012E03+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF019C24+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
rJMFF007H18+          GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
                      ____________________________________________________________
consensus             GGGACAGACAAGTACTGCATTTGGCAGTTCAACTTCCGGGAATTCGATCCCAACGAGGAT
 
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JMFF013D17-           GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATT               
JMSF038M19-           GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
JMSF029K01-           GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMSF029K01+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF031L15+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF013D17+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMSF038M19+          GTTTTNGCGAGNGATTCCATCGAGNTGCTGCGGCAGTGTGGGANTGATTTCGAGAAGAAC
rJMFF012E03+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF019C24+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
rJMFF007H18+          GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
                      ____________________________________________________________
consensus             GTTTTCGCGAGCGATTCCATCGAGCTGCTGCGGCAGTGTGGGATTGATTTCGAGAAGAAC
 
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JMSF038M19-           ACGGA                                                       
JMSF029K01-           ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMSF029K01+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF031L15+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF013D17+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMSF038M19+          NCGGAGAGTGGGATCGAGGNGAGGAGATTTGGGGAGCTGTTGANGTCATCAGGGATTGTN
rJMFF012E03+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF019C24+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
rJMFF007H18+          ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
                      ____________________________________________________________
consensus             ACGGAGAGTGGGATCGAGGCGAGGAGATTTGGGGAGCTGTTGATGTCATCAGGGATTGTG
 
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JMSF029K01-           TTGANCGATAGCGTTCAC                                          
rJMSF029K01+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF031L15+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF013D17+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMSF038M19+          TTGAACGATAGCGTTCACTGGGTGNCATTCCACAGNGGNTATGATTTNGGGTACCTNCTG
rJMFF012E03+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF019C24+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
rJMFF007H18+          TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
                      ____________________________________________________________
consensus             TTGAACGATAGCGTTCACTGGGTGACATTCCACAGTGGGTATGATTTCGGGTACCTGCTG
 
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rJMSF029K01+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF031L15+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF013D17+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMSF038M19+          AAGATACNGNCNNGNCNGGAGTTGCCGGNNNCGCAGCAGGGGTTTTTTGCCCTNATCAAC
rJMFF012E03+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF019C24+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
rJMFF007H18+          AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
                      ____________________________________________________________
consensus             AAGATACTGACTTGCCAGGAGTTGCCGGAGACGCAGCAGGGGTTCTTTGCCCTCATCAAC
 
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rJMSF029K01+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF031L15+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF013D17+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMSF038M19+          ANGTATTTCCCGGAGGTGTTTGNCATCAAGCACNTNATGAGGTTTTGCAACAGCCTCCAT
rJMFF012E03+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF019C24+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
rJMFF007H18+          ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
                      ____________________________________________________________
consensus             ATGTATTTCCCGGAGGTGTTTGACATCAAGCACTTGATGAGGTTCTGCAACAGCCTCCAT
 
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rJMSF029K01+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF031L15+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF013D17+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMSF038M19+          GGTNGGTNGAACAAGCTNGCGGANCTGTTGGAAGTGGAGAGAGTGGGNGTCNGCCATCAA
rJMFF012E03+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF019C24+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
rJMFF007H18+          GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
                      ____________________________________________________________
consensus             GGTGGGTTGAACAAGCTGGCGGAGCTGTTGGAAGTGGAGAGAGTGGGCGTCTGCCATCAA
 
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rJMSF029K01+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF031L15+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF013D17+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMSF038M19+          GCCGGCTCGGATAGCTTGNTCNNTGNTTGTACCTTCAGGAAGNTGAAAGACAACTTCTTT
rJMFF012E03+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF019C24+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
rJMFF007H18+          GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
                      ____________________________________________________________
consensus             GCCGGCTCGGATAGCTTGCTCACTGCTTGTACCTTCAGGAAGTTGAAAGACAACTTCTTT
 
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rJMSF029K01+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF031L15+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF013D17+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMSF038M19+          AGTGGCTCACTGGAGGAGTANTNTGGTGTCTTGTATGGTNTAGGCGTTGAGAATGGACAG
rJMFF012E03+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF019C24+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
rJMFF007H18+          AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
                      ____________________________________________________________
consensus             AGTGGCTCACTGGAGGAGTACTCTGGTGTCTTGTATGGTCTAGGCGTTGAGAATGGACAG
 
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rJMSF029K01+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAAACAAAAAAAC
rJMFF031L15+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF013D17+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMSF038M19+          NATAGCAGCAGCAGCAGCACGCTATTGTTGACCTACAAAAACNAAAAAAACNAAAAAACA
rJMFF012E03+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF019C24+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
rJMFF007H18+          AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
                      ____________________________________________________________
consensus             AATAGCAGCAGCAGCAGCAC-CTATTGTTGACCTACAAAAACAAAAAAAACAAAAAAACA
 
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rJMSF029K01+          AAAAACCAAAATTGTGACAGTATAGGTGATGTGATGTGACGTGTGCGCTTCAAGGTTGCA
rJMFF031L15+          AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF013D17+          AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMSF038M19+          AAAACCAANAGTTGTGNCAGTATAGGTNATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF012E03+          AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF019C24+          AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
rJMFF007H18+          AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
                      ____________________________________________________________
consensus             AAAACCAAAA-TTGTGACAGTATAGGTGATGTGATGTGATGTGTGCGCTTCAAGGTTGCA
 
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rJMSF029K01+          TCTGTATACACACACACTAATTCAAAAATGTTTGT                         
rJMFF031L15+          TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTAT                  
rJMFF013D17+          TCTGTATACACACACACTAATTCAAAAATGT                             
rJMSF038M19+          TCTGTATACACACNCANTAANTCAAAAATGTTTG                          
rJMFF012E03+          TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAA    
rJMFF019C24+          TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAA    
rJMFF007H18+          TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAATCTC
                      ____________________________________________________________
consensus             TCTGTATACACACACACTAATTCAAAAATGTTTGTTGTTTATTTATATAGAACAAATCTC