| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007C09 | Sequence | 533 | 000566 (9) | ref|XP_006347560.1| | 9e-72 | PREDICTED: uncharacterized protein At1g51745-like isoform X1 [Solanum tuberosum | 759 | 008143 (3) | ref|XP_004235289.1| | 2e-69 | PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum] |
| JMFS145D12 | Sequence | 628 | 008143 (3) | ref|XP_004235289.1| | 8e-69 | PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum] | |||||
| JMSF035M15 | Sequence | 655 | 023247 | ref|XP_007131537.1| | 2e-20 | hypothetical protein PHAVU_011G021400g [Phaseolus vulgaris] gb|ESW03531.1| hypot | 700 | 008143 (3) | ref|XP_004235289.1| | 1e-59 | PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS145D12- CCAAGAGTGCTGATAGATGTGGATTTGAAAGT
rJMFF007C09+ TGGTGGGCCAAGAGTGCTGATAGATGTGGATTTGAAAGT
____________________________________________________________
consensus TGGTGGGCCAAGAGTGCTGATAGATGTGGATTTGAAAGT
. : . : . : . : . : . :
rJMSF035M15+ TTGATTTCATTAACAAGTAAGAAAAATGG
JMFS145D12- CCAAGCTGGTTACAAGAGACAGCCTGTACCTTTGATTTCATTAACAAGTAAGAAAAATGG
rJMFF007C09+ CCAAGCTGGTTACAAGAGACAGCCTGTACCTTTGATTTCATTAACAAGTAAGAAAAATGG
____________________________________________________________
consensus CCAAGCTGGTTACAAGAGACAGCCTGTACCTTTGATTTCATTAACAAGTAAGAAAAATGG
. : . : . : . : . : . :
rJMSF035M15+ GCAGGCAATAGTAGGGCACCCTGTCAAAATTGAAGTCCTTGAAAATGGTGCTTTTGAGAG
JMFS145D12- GCAGGCAATAGTAGGGCACCCTGTCAAAATTGAAGTCCTTGAAAATGGTGCTTTTGAGAG
rJMFF007C09+ GCAGGCAATAGTAGGGCACCCTGTCAAAATTGAAGTCCTTGAAAATGGTGCTTTTGAGAG
____________________________________________________________
consensus GCAGGCAATAGTAGGGCACCCTGTCAAAATTGAAGTCCTTGAAAATGGTGCTTTTGAGAG
. : . : . : . : . : . :
rJMSF035M15+ CCTTTTCGGTGCAGTTGATGATATATGCCCAGAAACATTAGACGATGCATCACACCAACC
JMFS145D12- CCTTTTCGGTGCAGTTGATGATATATGCCCAGAAACATTAGACGATGCATCACACCAACC
rJMFF007C09+ CCTTTTCGGTGCAGTTGATGATATATGCCCAGAAACATTAGACGATGCATCACACCAACC
____________________________________________________________
consensus CCTTTTCGGTGCAGTTGATGATATATGCCCAGAAACATTAGACGATGCATCACACCAACC
. : . : . : . : . : . :
rJMSF035M15+ CATGTGGAGGACTGCTCGTAGGACAGCTGGTGCCCGAGTTCCACGCCCTCATCTATCATC
JMFS145D12- CATGTGGAGGACTGCTCGTAGGACAGCTGGTGCCCGAGTTCCACGCCCTCATCTATCATC
rJMFF007C09+ CATGTGGAGGACTGCTCGTAGGACAGCTGGTGCCCGAGTTCCACGCCCTCATCTATCATC
____________________________________________________________
consensus CATGTGGAGGACTGCTCGTAGGACAGCTGGTGCCCGAGTTCCACGCCCTCATCTATCATC
. : . : . : . : . : . :
rJMSF035M15+ AATAGAGCGCGACAGAAATGTTAGTAAAGCTAGTTCAACAGGTTTTGGTCAAAAGGCAAG
JMFS145D12- AATAGAGCGCGACAGAAATGTTAGTAAAGCTAGTTCAACAGGTTTTGGTCAAAAGGCAAG
rJMFF007C09+ AATAGAGCGCGACAGAAATGTTAGTAAAGCTAGTTCAACAGGTTTTGGTCAAAAGGCAAG
____________________________________________________________
consensus AATAGAGCGCGACAGAAATGTTAGTAAAGCTAGTTCAACAGGTTTTGGTCAAAAGGCAAG
. : . : . : . : . : . :
rJMSF035M15+ TCCAGTGAGGAAGAACACCTCCCGACCTCCATTTGAGAAGGCGTTCTCCAAAAGGCCACA
JMFS145D12- TCCAGTGAGGAAGAACACCTCCCAACCTCCATTTGAGAAGGCGTTCTCCAAAAGGCCACA
rJMFF007C09+ TCCAGTGAGGAAGAACACCTCCCAACCTCCATTTGAGAAGGCGTTCTCCAAAAGGCCACA
____________________________________________________________
consensus TCCAGTGAGGAAGAACACCTCCCAACCTCCATTTGAGAAGGCGTTCTCCAAAAGGCCACA
. : . : . : . : . : . :
rJMSF035M15+ TAGAAATGGAACAATGTCTTCTAATCAGAAGATAAGAACGCTTTCATCAATTGCCTCGCA
JMFS145D12- TAGAAATGGAACAATGTCTTCTAATCAGAAGATAAGAACGCTTTCATCAATTGCCTCGCA
rJMFF007C09+ TAGAAATGGAACAATGTCTTCTAATCAGAAGATAAGAACGCTTTCATCAATTGCCTCGCA
____________________________________________________________
consensus TAGAAATGGAACAATGTCTTCTAATCAGAAGATAAGAACGCTTTCATCAATTGCCTCGCA
. : . : . : . : . : . :
rJMSF035M15+ ACAGAAACAAAGCGGTGATATGAAGCGTAGCTTCAACAGTTTCCAAGTGAATGGGCTACT
JMFS145D12- ACAGAAACAAAGCGGTGATATGAAGCGTAGCTTCAACAGTTTCCAAGTGAATGGGCTACT
rJMFF007C09+ ACAGAAACAAAGCGGTGATATGAAGCGTAGCTTCAACAGTTTCCAAGTGAATGGGCTACT
____________________________________________________________
consensus ACAGAAACAAAGCGGTGATATGAAGCGTAGCTTCAACAGTTTCCAAGTGAATGGGCTACT
. : . : . : . : . : . :
rJMSF035M15+ CAAACAAGAGAGTATGCCCACAGTAGTGTGTATTCCGGTGAAGCTAGTGTTCAGCAGATT
JMFS145D12- CAAACAAGAGAGTATGCCCACAGTAGTGTGTATTCCGGTGAAGCTAGTGTTCAGCAGATT
rJMFF007C09+ CAAACAAGAGAGTATGCCCACAGTAGTGTGTATTCCGGTGAAGCTAGTGTTCAGCAGATT
____________________________________________________________
consensus CAAACAAGAGAGTATGCCCACAGTAGTGTGTATTCCGGTGAAGCTAGTGTTCAGCAGATT
. : . : . : . : . : . :
rJMSF035M15+ AAATGAGGAGTTGGTGGGACGTCATCCATAGAAACAAGCCTGGTATGGAGTAAGACAATA
JMFS145D12- AAATGAGGAGTTGGTGGGACGTCATCCATAGAAACAAGCCTGGTATGGAGTAAGAC
rJMFF007C09+ AAATGAGGAGTTGGTGGGACGTCATCCATAGAAACAAGCCTGGTATGGAGTAAGACAATA
____________________________________________________________
consensus AAATGAGGAGTTGGTGGGACGTCATCCATAGAAACAAGCCTGGTATGGAGTAAGACAATA
. : . : . : . : . : . :
rJMSF035M15+ CAGAAGTAACTAGTAATACTAACTTGTAATGTGCAAACAATAATATCATGTCTGATAGAT
rJMFF007C09+ CAGAAGTAACTAGTAATACTAACTTGTAATGTGCAAACAATAATATCATGTCTGATAGAT
____________________________________________________________
consensus CAGAAGTAACTAGTAATACTAACTTGTAATGTGCAAACAATAATATCATGTCTGATAGAT
. : . : . : . : . : . :
rJMSF035M15+ AATGCATCCATGACCCATCTATTGTTGGGTCTTTGTTGTCCAATATCTGTAT
rJMFF007C09+ AATGCATCCATGACCCATCTATTGTTGGGTCTTTGTTGTCCAATATCTGTATTTATTACC
____________________________________________________________
consensus AATGCATCCATGACCCATCTATTGTTGGGTCTTTGTTGTCCAATATCTGTATTTATTACC