Contig 008138:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF006L02-                           CACTGGGTAGTTTAATTAGTTTCAATTCAACCGTACCCCCAGAC
JMSF045J12-                       GGTGCACTGGGTAGTTTAATTAGTTTCAATTCAACCGTACCCCCAGAC
                      ____________________________________________________________
consensus                         GGTGCACTGGGTAGTTTAATTAGTTTCAATTCAACCGTACCCCCAGAC
 
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JMFF006L02-           CTCTCTCTCATTGCATTCTTATATTTTACTAGTTTTTTTAATCTGTTCCTCGACGATCCT
JMSF045J12-           CTCTCTCTCATTGCATTCTTATATTTTACTAGTTTTTTTAATCTGTTCCTCGACGATCCT
                      ____________________________________________________________
consensus             CTCTCTCTCATTGCATTCTTATATTTTACTAGTTTTTTTAATCTGTTCCTCGACGATCCT
 
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JMFF006L02-           GGGCTTGAGTGAGTCATGGATTCGCAGGAATGGATTATTTTCATACTCCTGAGTTTACAT
JMSF045J12-           GGGCTTGAGTGAGTCATGGATTCGCAGGAATGGATTATTTTCATACTCCTGAGTTTACAT
                      ____________________________________________________________
consensus             GGGCTTGAGTGAGTCATGGATTCGCAGGAATGGATTATTTTCATACTCCTGAGTTTACAT
 
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JMFF006L02-           CTTTGTTCCGCCACCATAGCCGCCGACAACATAGATCCCAATTACGAATGGCACCAGTGC
JMSF045J12-           CTTTGTTCCGCCACCATAGCCGCCGACAACATAGATCCCAATTACGAATGGCACCAGTGC
                      ____________________________________________________________
consensus             CTTTGTTCCGCCACCATAGCCGCCGACAACATAGATCCCAATTACGAATGGCACCAGTGC
 
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JMFF006L02-           GGAACGAGTGGGAACTACACTCCAAACAGCACATACGACAACAACCTCAACACACTTCTG
JMSF045J12-           GGAACGAGTGGGAACTACACTCCAAACAGCACATACGACAACAACCTCAACACACTTCTG
                      ____________________________________________________________
consensus             GGAACGAGTGGGAACTACACTCCAAACAGCACATACGACAACAACCTCAACACACTTCTG
 
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JMFF006L02-           TCGTCCCTCTCAAACAACGTAAACCAATACGGATTCTACAACGGTTCCGTTGGGCAAGAC
JMSF045J12-           TCGTCCCTCTCAAACAACGTAAACCAATACGGATTCTACAACGGTTCCGTTGGGCAAGAC
                      ____________________________________________________________
consensus             TCGTCCCTCTCAAACAACGTAAACCAATACGGATTCTACAACGGTTCCGTTGGGCAAGAC
 
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JMFF006L02-           TCGGAGAGGGCTAGCGCTATTGTGCTGTGCAGAGGGGACATTGAACTGAGTGTATGTCGT
JMSF045J12-           TCGGAGAGGGCTAGCGCTATTGTGCTGTGCAGAGGGGACATTGAACTGAGTGTATGTCGT
                      ____________________________________________________________
consensus             TCGGAGAGGGCTAGCGCTATTGTGCTGTGCAGAGGGGACATTGAACTGAGTGTATGTCGT
 
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JMFF006L02-           GGGTGTGTTAAGGATAATGCTGAGAGGATCAAACAGTTGTGTCCTAATCAGAGGGAGGCA
JMSF045J12-           GGGTGTGTTAAGGATAATGCTGAGAGGATCAAACAGTTGTGTCCTAATCAGAGGGAGGCA
                      ____________________________________________________________
consensus             GGGTGTGTTAAGGATAATGCTGAGAGGATCAAACAGTTGTGTCCTAATCAGAGGGAGGCA
 
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JMFF006L02-           TTCCGGTGGTACAACATCTGCAGTATATATTACTCCCATGAATCCATCCTAGGTTCTTTG
JMSF045J12-           TTCCGGTGGTACAACATCTGCAGTATATATTACTCCCATGAATCCATCCTAGGTTCTTTG
                      ____________________________________________________________
consensus             TTCCGGTGGTACAACATCTGCAGTATATATTACTCCCATGAATCCATCCTAGGTTCTTTG
 
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JMFF006L02-           CGAATCACTCCTGAAATCGAACAACATAGTATTACCCCTGTTAAGAATCCTGGTCAGTT 
JMSF045J12-           CGAATCACTCCTGAAATCGAACAACATAGTATTACCCCTGTTAAGAATCCTGGTCAGTTT
rJMSF045J12+                ACTCCTGAAATCGAACAACATAGTATTACCCCTGTTAAGAATCCTGGTCAGTTT
rJMFF006L02+                                  CATAGTATTACCCCTGTTAAGAATCCTGGTCAGTTT
                      ____________________________________________________________
consensus             CGAATCACTCCTGAAATCGAACAACATAGTATTACCCCTGTTAAGAATCCTGGTCAGTTT
 
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JMSF045J12-           AATCAGGATTTGACGAGCCTGGTAGACAGACTAAGAAGACAAGCCGTGAATGGCGGTCCG
rJMSF045J12+          AATCAGGATTTGACGAGCCTGGTAGACAGACTAAGAAGACAAGCCGTGAATGGCGGTCCG
rJMFF006L02+          AATCAGGATTTGACGAGCCTGGTAGACAGACTAAGAAGACAAGCCGTGAATGGCGGTCCG
                      ____________________________________________________________
consensus             AATCAGGATTTGACGAGCCTGGTAGACAGACTAAGAAGACAAGCCGTGAATGGCGGTCCG
 
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JMSF045J12-           TTCCTCAAGTACGCGGCTAATAGTACGGCGGGACCGGACTCCCAGACCATATATGCGTAT
rJMSF045J12+          TTCCTCAAGTACGCGGCTAATAGTACGGCGGGACCGGACTCCCAGACCATATATGCGTAT
rJMFF006L02+          TTCCTCAAGTACGCGGCTAATAGTACGGCGGGACCGGACTCCCAGACCATATATGCGTAT
                      ____________________________________________________________
consensus             TTCCTCAAGTACGCGGCTAATAGTACGGCGGGACCGGACTCCCAGACCATATATGCGTAT
 
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JMSF045J12-           GTGCAGTGCACCCCTGATTTGTCTGTTCGCGATTGCGAAAATTGCCTGAAAAAGTGCTTT
rJMSF045J12+          GTGCAGTGCACCCCTGATTTGTCTGTTCGCGATTGCGAAAATTGCCTG-AAAAGTGCTTT
rJMFF006L02+          GTGCAGTGCACCCCTGATTTGTCTGTTCGCGATTGCGAAAATTGCCTG-AAAAGTGCTTT
                      ____________________________________________________________
consensus             GTGCAGTGCACCCCTGATTTGTCTGTTCGCGATTGCGAAAATTGCCTG-AAAAGTGCTTT
 
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JMSF045J12-           CGCTCTATGGAATAAATCGAAGGGTAATGGG                             
rJMSF045J12+          CGCTCTATGGAATAAATCGAAGGGTAATGGGATGATAGGGGCAAGAGTTCTGCGTCCCAG
rJMFF006L02+          CGCTCTATGGAATAAATCGAAGGGTAATGGGATGATAGGGGCAAGAGTTCTGCGTCCCAG
                      ____________________________________________________________
consensus             CGCTCTATGGAATAAATCGAAGGGTAATGGGATGATAGGGGCAAGAGTTCTGCGTCCCAG
 
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rJMSF045J12+          CTGCTTTTTTCGCTATGAGATTAGCCCCTTCTTCGGTGCCTCGCTCATTAACGGATCTCA
rJMFF006L02+          CTGCTTTTTTCGCTATGAGATTAGCCCCTTCTTCGGTGCCTCGCTCATTAACGGATCTCA
                      ____________________________________________________________
consensus             CTGCTTTTTTCGCTATGAGATTAGCCCCTTCTTCGGTGCCTCGCTCATTAACGGATCTCA
 
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rJMSF045J12+          TTCAGCACCTCAACCACTTCCACCACCACTAGCTTCGCCTTCACCTGCTTCTTCTCCTCC
rJMFF006L02+          TTCAGCACCTCAACCACTTCCACCACCACTAGCTTCGCCTTCACCTGCTTCTTCTCCTCC
                      ____________________________________________________________
consensus             TTCAGCACCTCAACCACTTCCACCACCACTAGCTTCGCCTTCACCTGCTTCTTCTCCTCC
 
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rJMSF045J12+          GCCACCACCGCAGTCAGGGAAGGATGGTAATAAAGCCTCAAGAGTAACCATTGCTGCTTC
rJMFF006L02+          GCCACCACCGCAGTCAGGGAAGGATGGTAATAAAGCCTCAAGAGTAACCATTGCTGCTTC
                      ____________________________________________________________
consensus             GCCACCACCGCAGTCAGGGAAGGATGGTAATAAAGCCTCAAGAGTAACCATTGCTGCTTC
 
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rJMSF045J12+          AATTGCGGCGGGACTCGTTCTTGGTGTCATCATCTGATTCAGTTAAGGCTCAAGAACCAC
rJMFF006L02+          AATTGCGGCGGGACTCGTTCTTGGTGTCATCATCTGATTCAGTTAAGGCTCAAGAACCAC
                      ____________________________________________________________
consensus             AATTGCGGCGGGACTCGTTCTTGGTGTCATCATCTGATTCAGTTAAGGCTCAAGAACCAC
 
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rJMSF045J12+          AAAGGAGAAGTTGCAGTTTAGAATAATTTGTGTTGAGCTGTACTGTTATGCTCTGTTGAG
rJMFF006L02+          AAAGGAGAAGTTGCAGTTTAGAATAATTTGTGTTGAGCTGTACTGTTATGCTCTGTTGAG
                      ____________________________________________________________
consensus             AAAGGAGAAGTTGCAGTTTAGAATAATTTGTGTTGAGCTGTACTGTTATGCTCTGTTGAG
 
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rJMSF045J12+          TGATCATCTATCGAAGGAATACAGTTATGTTTGTTTGTTTGAATTATGAGGTTTTTGAGT
rJMFF006L02+          TGATCATCTATCGAAGGAATACAGTTATGTTTGTTTGTTTGAATTATGAGGTTTTTGAGT
                      ____________________________________________________________
consensus             TGATCATCTATCGAAGGAATACAGTTATGTTTGTTTGTTTGAATTATGAGGTTTTTGAGT
 
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rJMSF045J12+          GCATCTTGAGTGGAGATAGAATTTAA                                  
rJMFF006L02+          GCATCTTGAGTGGAGATAGAATTTAAGTGTGATTTTTTACTTGTAATCATAGACTTATTA
                      ____________________________________________________________
consensus             GCATCTTGAGTGGAGATAGAATTTAAGTGTGATTTTTTACTTGTAATCATAGACTTATTA
 
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rJMFF006L02+          TGTTACTCAATAATAAATTGAGCTTTTGTAATTTGTATTGATATGATATTTGTGTGCACT
                      ____________________________________________________________
consensus             TGTTACTCAATAATAAATTGAGCTTTTGTAATTTGTATTGATATGATATTTGTGTGCACT