Contig 008132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P12Sequence542003407 (9)ref|XP_009611045.1|8e-29PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi714008132 (7)ref|XP_009611045.1|3e-80PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMFF006I15Sequence542003407 (9)gb|AFK40961.1|2e-30unknown [Lotus japonicus]791008132 (7)ref|XP_009611045.1|2e-97PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF015I01Sequence432003407 (9)ref|XP_004512162.1|7e-06PREDICTED: cell number regulator 13-like isoform X6 [Cicer arietinum]752008132 (7)ref|XP_009611045.1|5e-86PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF016P12Sequence412003407 (9)ref|XP_003612221.1|6e-12hypothetical protein MTR_5g022670 [Medicago truncatula] gb|AES95179.1| MID1-comp781008132 (7)ref|XP_009611045.1|9e-109PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF023B18Sequence661003407 (9)ref|NP_001242304.1|2e-55uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci768008132 (7)ref|XP_009611045.1|2e-106PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi
JMSF023H01Sequence664003407 (9)ref|NP_001242304.1|7e-58uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci641008132 (7)dbj|BAK32933.1|6e-76mid1-complementing activity 2 [Nicotiana tabacum]
JMSF039K24Sequence661003407 (9)ref|NP_001242304.1|2e-56uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci873008132 (7)ref|XP_009611045.1|2e-115PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi

Alignment

This contig is upended


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rJMSF016P12+                                                AAATGAAAAACTACAGCTAGAG
rJMSF023B18+                                                          CTACAGCTAGAG
rJMSF039K24+                   GTGCCCATCAATGAGGCTATTCGAAAAGAAAATGAAAAACTACAGCTAGAG
                      ____________________________________________________________
consensus                      GTGCCCATCAATGAGGCTATTCGAAAAGAAAATGAAAAACTACAGCTAGAG
 
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rJMSF016P12+          CTGCAACGNTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMFF006I15+                                 AGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMSF023B18+          CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMSF039K24+          CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
                      ____________________________________________________________
consensus             CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
 
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rJMSF016P12+          GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMFF006I15+          GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF023B18+          GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF015I01+                   GAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF023H01+                                                                  ACCT
rJMSF039K24+          GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
                      ____________________________________________________________
consensus             GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
 
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rJMSF016P12+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMFF006I15+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF023B18+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF015I01+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF023H01+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF039K24+          CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMFF004P12+               GGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
                      ____________________________________________________________
consensus             CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
 
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rJMSF016P12+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMFF006I15+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF023B18+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF015I01+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF023H01+          TACGGGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF039K24+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMFF004P12+          TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
                      ____________________________________________________________
consensus             TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
 
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rJMSF016P12+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMFF006I15+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF023B18+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF015I01+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF023H01+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF039K24+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMFF004P12+          ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
                      ____________________________________________________________
consensus             ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
 
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rJMSF016P12+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMFF006I15+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF023B18+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF015I01+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF023H01+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF039K24+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMFF004P12+          GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
                      ____________________________________________________________
consensus             GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
 
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rJMSF016P12+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMFF006I15+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF023B18+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF015I01+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF023H01+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF039K24+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMFF004P12+          TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
                      ____________________________________________________________
consensus             TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
 
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rJMSF016P12+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMFF006I15+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF023B18+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF015I01+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF023H01+          GTTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF039K24+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMFF004P12+          ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
                      ____________________________________________________________
consensus             ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
 
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rJMSF016P12+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMFF006I15+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF023B18+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF015I01+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF023H01+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF039K24+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMFF004P12+          GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
                      ____________________________________________________________
consensus             GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
 
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rJMSF016P12+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMFF006I15+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF023B18+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF015I01+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF023H01+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF039K24+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMFF004P12+          GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
                      ____________________________________________________________
consensus             GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
 
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rJMSF016P12+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMFF006I15+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF023B18+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF015I01+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAG-AAGCATG
rJMSF023H01+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF039K24+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMFF004P12+          TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
                      ____________________________________________________________
consensus             TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
 
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rJMSF016P12+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMFF006I15+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF023B18+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF015I01+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF023H01+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF039K24+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMFF004P12+          GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
                      ____________________________________________________________
consensus             GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
 
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rJMSF016P12+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTC                    
rJMFF006I15+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMSF023B18+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTAC                       
rJMSF015I01+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMSF023H01+          ATGGATACATATGGATTGTTCTTTTATTTAAGCCTAC                       
rJMSF039K24+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMFF004P12+          ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
                      ____________________________________________________________
consensus             ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
 
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rJMFF006I15+          CTTTATCAAGATTGAACTTCA                                       
rJMSF015I01+          CTT                                                         
rJMSF039K24+          CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCAT                 
rJMFF004P12+          CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCATTGTCTCTTTCGAGTGAT
                      ____________________________________________________________
consensus             CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCATTGTCTCTTTCGAGTGAT