clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004P12 | Sequence | 542 | 003407 (9) | ref|XP_009611045.1| | 8e-29 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi | 714 | 008132 (7) | ref|XP_009611045.1| | 3e-80 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
JMFF006I15 | Sequence | 542 | 003407 (9) | gb|AFK40961.1| | 2e-30 | unknown [Lotus japonicus] | 791 | 008132 (7) | ref|XP_009611045.1| | 2e-97 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
JMSF015I01 | Sequence | 432 | 003407 (9) | ref|XP_004512162.1| | 7e-06 | PREDICTED: cell number regulator 13-like isoform X6 [Cicer arietinum] | 752 | 008132 (7) | ref|XP_009611045.1| | 5e-86 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
JMSF016P12 | Sequence | 412 | 003407 (9) | ref|XP_003612221.1| | 6e-12 | hypothetical protein MTR_5g022670 [Medicago truncatula] gb|AES95179.1| MID1-comp | 781 | 008132 (7) | ref|XP_009611045.1| | 9e-109 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
JMSF023B18 | Sequence | 661 | 003407 (9) | ref|NP_001242304.1| | 2e-55 | uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci | 768 | 008132 (7) | ref|XP_009611045.1| | 2e-106 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
JMSF023H01 | Sequence | 664 | 003407 (9) | ref|NP_001242304.1| | 7e-58 | uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci | 641 | 008132 (7) | dbj|BAK32933.1| | 6e-76 | mid1-complementing activity 2 [Nicotiana tabacum] |
JMSF039K24 | Sequence | 661 | 003407 (9) | ref|NP_001242304.1| | 2e-56 | uncharacterized protein LOC100811369 [Glycine max] gb|ACU17641.1| unknown [Glyci | 873 | 008132 (7) | ref|XP_009611045.1| | 2e-115 | PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Nicotiana tomentosiformi |
This contig is upended
. : . : . : . : . : . :
rJMSF016P12+ AAATGAAAAACTACAGCTAGAG
rJMSF023B18+ CTACAGCTAGAG
rJMSF039K24+ GTGCCCATCAATGAGGCTATTCGAAAAGAAAATGAAAAACTACAGCTAGAG
____________________________________________________________
consensus GTGCCCATCAATGAGGCTATTCGAAAAGAAAATGAAAAACTACAGCTAGAG
. : . : . : . : . : . :
rJMSF016P12+ CTGCAACGNTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMFF006I15+ AGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMSF023B18+ CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
rJMSF039K24+ CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
____________________________________________________________
consensus CTGCAACGTTCACAAGCTAATTTAGATGTAAATCAGTGTGAATTCATTCAACATCTTCTT
. : . : . : . : . : . :
rJMSF016P12+ GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMFF006I15+ GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF023B18+ GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF015I01+ GAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
rJMSF023H01+ ACCT
rJMSF039K24+ GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
____________________________________________________________
consensus GATGTCACAGAAGTTGTTGCTGCTACTTCTCTTCCGGACAAGAGTTTACCTGCCAAACCT
. : . : . : . : . : . :
rJMSF016P12+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMFF006I15+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF023B18+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF015I01+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF023H01+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMSF039K24+ CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
rJMFF004P12+ GGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
____________________________________________________________
consensus CTCAAGGTGGAGCATGGTTATTCAGATGCTGATAGTGATAAGCAAAATTATGATCAAAGC
. : . : . : . : . : . :
rJMSF016P12+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMFF006I15+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF023B18+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF015I01+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF023H01+ TACGGGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMSF039K24+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
rJMFF004P12+ TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
____________________________________________________________
consensus TAC-GGAAAGAATGATGAAAAATGGTCAACTTCAAGAAACACTTCTTCAGTTTCATCCAA
. : . : . : . : . : . :
rJMSF016P12+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMFF006I15+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF023B18+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF015I01+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF023H01+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMSF039K24+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
rJMFF004P12+ ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
____________________________________________________________
consensus ACACGACTTGATTTCTTCTAAGGGCTCACATCGATATGAAGAATGGCATTCAGATCTTTT
. : . : . : . : . : . :
rJMSF016P12+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMFF006I15+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF023B18+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF015I01+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF023H01+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMSF039K24+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
rJMFF004P12+ GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
____________________________________________________________
consensus GGGCTGTTGTTCAGAACCTCTTCTGTGCATAAAAACCTTACTATTTCCTTGTGGGACATT
. : . : . : . : . : . :
rJMSF016P12+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMFF006I15+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF023B18+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF015I01+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF023H01+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMSF039K24+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
rJMFF004P12+ TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
____________________________________________________________
consensus TTCAAGAATTGCAACCGCAGCAACCAACAGGCATATATCTTCAGCTGAAGCTTGTAATGA
. : . : . : . : . : . :
rJMSF016P12+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMFF006I15+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF023B18+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF015I01+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF023H01+ GTTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMSF039K24+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
rJMFF004P12+ ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
____________________________________________________________
consensus ATTAATGGCATACTCCTTAATATTGTCCTGCTGCTGTTACACATGTTGCATCAGAAGGAA
. : . : . : . : . : . :
rJMSF016P12+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMFF006I15+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF023B18+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF015I01+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF023H01+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMSF039K24+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
rJMFF004P12+ GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
____________________________________________________________
consensus GCTGCGGAAAAAGCTAAGCATCCCGGGAGGGTTCATTGATGATTTCCTGTCTCACTTGAT
. : . : . : . : . : . :
rJMSF016P12+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMFF006I15+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF023B18+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF015I01+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF023H01+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMSF039K24+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
rJMFF004P12+ GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
____________________________________________________________
consensus GTGCTGTTGCTGTGCCCTGGTCCAGGAATGGCGCGAAATTGAGATTCGTGGAATTGAGGG
. : . : . : . : . : . :
rJMSF016P12+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMFF006I15+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF023B18+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF015I01+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAG-AAGCATG
rJMSF023H01+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMSF039K24+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
rJMFF004P12+ TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
____________________________________________________________
consensus TACACACAAGACAAAAACAAGCCCTCCATCCACCCAATTCATGGAATCCTAGAAAGCATG
. : . : . : . : . : . :
rJMSF016P12+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMFF006I15+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF023B18+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF015I01+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF023H01+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMSF039K24+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
rJMFF004P12+ GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
____________________________________________________________
consensus GGTGATATTTCAGGATTTAGCATAGTAATATTAAAAGTAGAGAGATTATAGCTAGGTGTC
. : . : . : . : . : . :
rJMSF016P12+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTC
rJMFF006I15+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMSF023B18+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTAC
rJMSF015I01+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMSF023H01+ ATGGATACATATGGATTGTTCTTTTATTTAAGCCTAC
rJMSF039K24+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
rJMFF004P12+ ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
____________________________________________________________
consensus ATGGATACATATGGATTGTTCTTTTATTCAAGCCTACCTCTCTGTAAAGTACCTTTTACC
. : . : . : . : . : . :
rJMFF006I15+ CTTTATCAAGATTGAACTTCA
rJMSF015I01+ CTT
rJMSF039K24+ CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCAT
rJMFF004P12+ CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCATTGTCTCTTTCGAGTGAT
____________________________________________________________
consensus CTTTATCAAGATTGAACTTCATGTAAATATCAAGATTTAGCATTGTCTCTTTCGAGTGAT