Contig 008129:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF003J22-                  TTAGTCTATATGTTACAGAAGGCCTTGAGAGGGCCAGGGATAGCCTTACTGAA
JMFF004I02-                  TTAGTCTATATGTTACAGAAGGCCTTGAGAGGGCCAGGGATAGCCTTACTGAA
                      ____________________________________________________________
consensus                    TTAGTCTATATGTTACAGAAGGCCTTGAGAGGGCCAGGGATAGCCTTACTGAA
 
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JMFF003J22-           GCTGCAGCTTTAAGGGAAAGATTTGTGTTGGGAACAAGTGTTAGTCGAAGGGTTGCTGCA
JMFF004I02-           GCTGCAGCTTTAAGGGAAAGATTTGTGTTGGGAACAAGTGTTAGTCGAAGGGTTGCTGCA
                      ____________________________________________________________
consensus             GCTGCAGCTTTAAGGGAAAGATTTGTGTTGGGAACAAGTGTTAGTCGAAGGGTTGCTGCA
 
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JMFF003J22-           GCAGCTGCTTCTGCTGCGGAAGCAGCAGCTGCTGCTGGTGAAAGCAGTTTCAAATCTTTC
JMFF004I02-           GCAGCTGCTTCTGCTGCGGAAGCAGCAGCTGCTGCTGGTGAAAGCAGTTTCAAATCTTTC
                      ____________________________________________________________
consensus             GCAGCTGCTTCTGCTGCGGAAGCAGCAGCTGCTGCTGGTGAAAGCAGTTTCAAATCTTTC
 
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JMFF003J22-           ATGGTGGCTGTTCAACGTTGTGGAAGCAGCGTGGCTATTGTTCAGCAATTTTTTGCCAAC
JMFF004I02-           ATGGTGGCTGTTCAACGTTGTGGAAGCAGCGTGGCTATTGTTCAGCAATTTTTTGCCAAC
                      ____________________________________________________________
consensus             ATGGTGGCTGTTCAACGTTGTGGAAGCAGCGTGGCTATTGTTCAGCAATTTTTTGCCAAC
 
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JMFF003J22-           TCTATTTCCCGGCTTTTGTTACCTGTGGATGGTGCCCATGCTGCTTCATGTGAAGAAATG
JMFF004I02-           TCTATTTCCCGGCTTTTGTTACCTGTGGATGGTGCCCATGCTGCTTCATGTGAAGAAATG
rJMFF003J22+                                            CCCATGCTGCTTCATGTGAAGAAATG
                      ____________________________________________________________
consensus             TCTATTTCCCGGCTTTTGTTACCTGTGGATGGTGCCCATGCTGCTTCATGTGAAGAAATG
 
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JMFF003J22-           GCAAAGGCAATGTCCAGTGCGGAAGGTGCTGCTTATAAGGGGCTTCAACAATGCATTGAA
JMFF004I02-           GCAAAGGCAATGTCCAGTGCGGAAGGTGCTGCTTATAAGGGGCTTCAACAATGCATTGAA
rJMFF003J22+          GCAAAGGCAATGTCCAGTGCGGAAGGTGCTGCTTATAAGGGGCTTCAACAATGCATTGAA
rJMFF004I02+                       CCAGTGCGGAAGGTGCTGCTTATAAGGGGCTTCAACAATGCATTGAA
                      ____________________________________________________________
consensus             GCAAAGGCAATGTCCAGTGCGGAAGGTGCTGCTTATAAGGGGCTTCAACAATGCATTGAA
 
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JMFF003J22-           ACTGTTATGGCTGAGGTGGAACGTTTGCTATCAACAGAACAAAAGACAACAGATTTTCGG
JMFF004I02-           ACTGTTATGGCTGAGGTGGAACGTTTGCTATCAACAGAACAAAAGACAACAGATTTTCGG
rJMFF003J22+          ACTGTTATGGCTGAGGTGGAACGTTTGCTATCAACAGAACAAAAGACAACAGATTTTCGG
rJMFF004I02+          ACTGTTATGGCTGAGGTGGAACGTTTGCTATCAACAGAACAAAAGACAACAGATTTTCGG
                      ____________________________________________________________
consensus             ACTGTTATGGCTGAGGTGGAACGTTTGCTATCAACAGAACAAAAGACAACAGATTTTCGG
 
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JMFF003J22-           TCACCTGATGATGGCATTGGCCCAGATCATCGACCAACAACTGCCTGTACAAGAGTTGTT
JMFF004I02-           TCACCTGATGATGGCATTGGCCCANATCATCGACCAACAACTGCCTGTACAAGAGTTGTT
rJMFF003J22+          TCACCTGATGATGGCATTGGCCCAGATCATCGACCAACAACTGCCTGTACAAGAGTTGTT
rJMFF042E24+                                        CGACCAACAACTGCCTGTACAAGAGTTGTT
rJMFF004I02+          TCACCTGATGATGGCATTGGCCCAGATCATCGACCAACAACTGCCTGTACAAGAGTTGTT
                      ____________________________________________________________
consensus             TCACCTGATGATGGCATTGGCCCAGATCATCGACCAACAACTGCCTGTACAAGAGTTGTT
 
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JMFF003J22-           GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAA       
JMFF004I02-           GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAATAAACA 
rJMFF003J22+          GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAATAAACAA
rJMFF042E24+          GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAATAAACAA
rJMFF004I02+          GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAATAAACAA
                      ____________________________________________________________
consensus             GCATACCTATCCCGAGTGCTTGAATCTGCATTTACTGGGCTTGATGGGCTAAATAAACAA
 
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rJMFF003J22+          GCTTTCCTCACTGAACTGGGCAATCGCCTTCACAAAGGGTTGCTTAATCATTGGCAGAAG
rJMFF042E24+          GCTTTCCTCACTGAACTGGGCAATCGCCTTCACAAAGGGTTGCTTAATCATTGGCAGAAG
rJMFF004I02+          GCTTTCCTCACTGAACTGGGCAATCGCCTTCACAAAGGGTTGCTTAATCATTGGCAGAAG
                      ____________________________________________________________
consensus             GCTTTCCTCACTGAACTGGGCAATCGCCTTCACAAAGGGTTGCTTAATCATTGGCAGAAG
 
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rJMFF003J22+          TTTACCTTCAATCCTAGTGGAGGACTCCGCTTGAAGCGTGATATAACTGAGTATGGAGAG
rJMFF042E24+          TTTACCTTCAATCCTAGTGGAGGACTCCGCTTGAAGCGTGATATAACTGAGTATGGAGAG
rJMFF004I02+          TTTACCTTCAATCCTAGTGGAGGACTCCGCTTGAAGCGTGATATAACTGAGTATGGAGAG
                      ____________________________________________________________
consensus             TTTACCTTCAATCCTAGTGGAGGACTCCGCTTGAAGCGTGATATAACTGAGTATGGAGAG
 
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rJMFF003J22+          TTTGTTCGTAGTTTCAATGCCCCCTCAGTTGATGAGAAATTTGAATTGCTGGGCATCATG
rJMFF042E24+          TTTGTTCGTAGTTTCAATGCCCCCTCAGTTGATGAGAAATTTGAATTGCTGGGCATCATG
rJMFF004I02+          TTTGTTCGTAGTTTCAATGCCCCCTCAGTTGATGAGAAATTTGAATTGCTGGGCATCATG
                      ____________________________________________________________
consensus             TTTGTTCGTAGTTTCAATGCCCCCTCAGTTGATGAGAAATTTGAATTGCTGGGCATCATG
 
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rJMFF003J22+          GCAAATGTCTTTATTGTTGCTCCTGAAAGCCTTTCCTCTCTGTTTGAGGGAACCCCAAGT
rJMFF042E24+          GCAAATGTCTTTATTGTTGCTCCTGAAAGCCTTTCCTCTCTGTTTGAGGGAACCCCAAGT
rJMFF004I02+          GCAAATGTCTTTATTGTTGCTCCTGAAAGCCTTTCCTCTCTGTTTGAGGGAACCCCAAGT
                      ____________________________________________________________
consensus             GCAAATGTCTTTATTGTTGCTCCTGAAAGCCTTTCCTCTCTGTTTGAGGGAACCCCAAGT
 
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rJMFF003J22+          ATTAGGAAAGATGCGCAGAGGTTCATTGAGCTTCGGGATGACTACAAAAGTGCAAAACTT
rJMFF042E24+          ATTAGGAAAGATGCGCAGAGGTTCATTGAGCTTCGGGATGACTACAAAAGTGCAAAACTT
rJMFF004I02+          ATTAGGAAAGATGCGCAGAGGTTCATTGAGCTTCGGGATGACTACAAAAGTGCAAAACTT
                      ____________________________________________________________
consensus             ATTAGGAAAGATGCGCAGAGGTTCATTGAGCTTCGGGATGACTACAAAAGTGCAAAACTT
 
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rJMFF003J22+          GCATCTAGATTTAGCTCCTTGTTTGGCTAGAACTCGATACTAAGCGATATGTGTGTAGAG
rJMFF042E24+          GCATCTAGATTTAGCTCCTTGTTTGGCTAGAACTCGATACTAAGCGATATGTGTGTAGAG
rJMFF004I02+          GCATCTAGATTTAGCTCCTTGTTTGGCTAGAACTCGATACTAAGCGATATGTGTGTAGAG
                      ____________________________________________________________
consensus             GCATCTAGATTTAGCTCCTTGTTTGGCTAGAACTCGATACTAAGCGATATGTGTGTAGAG
 
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rJMFF003J22+          GCAATGTAACTCTAAAGACTGCTTCGGCTCACAATGTTGTTATGTTTGTACCTAGTACTG
rJMFF042E24+          GCAATGTAACTCTAAAGACTGCTTCGGCTCACAATGTTGTTATGTTTGTACCTAGTACTG
rJMFF004I02+          GCAATGTAACTCTAAAGACTGCTTCGGCTCACAATGTTGTTATGTTTGTACCTAGTACTG
                      ____________________________________________________________
consensus             GCAATGTAACTCTAAAGACTGCTTCGGCTCACAATGTTGTTATGTTTGTACCTAGTACTG
 
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rJMFF003J22+          AATGCATTGGGCATTTTGCAAGTGATGATTGGCTCACAATGTTGTTATGTTTGTACCTAG
rJMFF042E24+          AATGCATTGGGCATTTTGCAAGTGATGATTGGCTCACAATGTTGTTATGTTTGTACCTAG
rJMFF004I02+          AATGCATTGGGCATTTTGCAAGTGATGATTGGCTCACAATGTTGTTATGTTTGTACCTAG
                      ____________________________________________________________
consensus             AATGCATTGGGCATTTTGCAAGTGATGATTGGCTCACAATGTTGTTATGTTTGTACCTAG
 
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rJMFF003J22+          TACTGAATGCATTGGGCATTTTGCAAGTGATGATTTGACAGTTTCTGTAAGTGAGAGGAT
rJMFF042E24+          TACTGAATGCATTGGGCATTTTGCAAGTGATGATTTGACAGTTTCTGT            
rJMFF004I02+          TACTGAATGCATTGGGCATTTTGCAAGTGATGATTTGACAGTTTCTGTAAGTGAGAGGAT
                      ____________________________________________________________
consensus             TACTGAATGCATTGGGCATTTTGCAAGTGATGATTTGACAGTTTCTGTAAGTGAGAGGAT