Contig 008128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G18Sequence496003711 (2)gb|KJB29269.1|7e-44hypothetical protein B456_005G094500 [Gossypium raimondii] gb|KJB29272.1| hypoth726008128 (2)ref|XP_009619696.1|3e-94PREDICTED: serine/threonine-protein kinase SAPK1 isoform X1 [Nicotiana tomentos
JMSF027M22Sequence650003711 (2)gb|KJB29269.1|3e-36hypothetical protein B456_005G094500 [Gossypium raimondii] gb|KJB29272.1| hypoth731008128 (2)ref|XP_009619696.1|2e-93PREDICTED: serine/threonine-protein kinase SAPK1 isoform X1 [Nicotiana tomentos

Alignment

This contig is upended


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rJMSF027M22+                                                          TATAGCCCCGCG
rJMFF004G18+                                                                CCCGCG
                      ____________________________________________________________
consensus                                                             TATAGCCCCGCG
 
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rJMSF027M22+          NGTCAAAATANGNGATTTTGGGTACTCTAAGTCAGATGTGTTTCATTCTCAACCTAAATC
rJMFF004G18+          TGTCAAAATATGTGATTTTGGGTACTCTAAGTCAGATGTGTTTCATTCTCAACCTAAATC
                      ____________________________________________________________
consensus             TGTCAAAATATGTGATTTTGGGTACTCTAAGTCAGATGTGTTTCATTCTCAACCTAAATC
 
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rJMSF027M22+          AACTGTGGGAACACCCGCTTATGTTGCTCCCGAGGTCCTATCAAGGAAAGAATATGATGG
rJMFF004G18+          AACTGTGGGAACACCCGCTTATGTTGCTCCCGAGGTCCTATCAAGGAAAGAATATGATGG
                      ____________________________________________________________
consensus             AACTGTGGGAACACCCGCTTATGTTGCTCCCGAGGTCCTATCAAGGAAAGAATATGATGG
 
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rJMSF027M22+          GAAGCTTGCAGATATCTGGTCTTGTGGTGTCACATTGTATGTGATGTTGGTTGGAGCCTA
rJMFF004G18+          GAAGCTTGCAGATATCTGGTCTTGTGGTGTCACATTGTATGTGATGTTGGTTGGAGCCTA
                      ____________________________________________________________
consensus             GAAGCTTGCAGATATCTGGTCTTGTGGTGTCACATTGTATGTGATGTTGGTTGGAGCCTA
 
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rJMSF027M22+          TCCTTTTGAAGATCCAAGTGATCCAAAAAATTTCAGAAAGACCATTGTTAAAATACTCGG
rJMFF004G18+          TCCTTTTGAAGATCCAAGTGATCCAAAAAATTTCAGAAAGACCATTGTTAAGATACTCGG
                      ____________________________________________________________
consensus             TCCTTTTGAAGATCCAAGTGATCCAAAAAATTTCAGAAAGACCATTGTTAAGATACTCGG
 
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rJMSF027M22+          TGTCCAATACTCCATTCCTGATAATATTCGCATTTCTGTTGAGTGCCGGCATCTTCTGTC
rJMFF004G18+          TGTCCAATACTCCATTCCTGATAATATTCGCATTTCTGTTGAGTGCCGGCATCTTCTGTC
                      ____________________________________________________________
consensus             TGTCCAATACTCCATTCCTGATAATATTCGCATTTCTGTTGAGTGCCGGCATCTTCTGTC
 
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rJMSF027M22+          AAGAATTTTTGTGGCTAACCCTGAAGAGAGAATAACCATTCCTGAAATAAGAAGGCACCC
rJMFF004G18+          AAGAATTTTTGTGGCTAACCCTGAAGAGAGAATAACCATTCCTGAAATAAGAAGGCACCC
                      ____________________________________________________________
consensus             AAGAATTTTTGTGGCTAACCCTGAAGAGAGAATAACCATTCCTGAAATAAGAAGGCACCC
 
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rJMSF027M22+          ATGGTTTCTGAAGAACTTGCCTGTAGAACTGATGGATGGAGGGAGCTATCAGTGCATGGA
rJMFF004G18+          ATGGTTTCTGAAGAACTTGCCTGTAGAACTGATGGATGGAGGGAGCTATCAGTGCATGGA
                      ____________________________________________________________
consensus             ATGGTTTCTGAAGAACTTGCCTGTAGAACTGATGGATGGAGGGAGCTATCAGTGCATGGA
 
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rJMSF027M22+          TGTAAATAATCCTTCCCAAAGCATGGAGGAAATATCGTCGATAATTCAGGAGGCAAGAAC
rJMFF004G18+          TGTAAATAATCCTTCCCAAAGCATGGAGGAAATATCGTCGATAATTCAGGAGGCAAGAAC
                      ____________________________________________________________
consensus             TGTAAATAATCCTTCCCAAAGCATGGAGGAAATATCGTCGATAATTCAGGAGGCAAGAAC
 
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rJMSF027M22+          AGTGGTTCAGTTGCCCAGAACTCGAACGTATTCTTTTGGTGGGAGCATGGAACTTGACGA
rJMFF004G18+          AGTGGTTCAGTTGCCCAGAACTCGAACGTATTCTTTTGGTGGGAGCATGGAACTTGACGA
                      ____________________________________________________________
consensus             AGTGGTTCAGTTGCCCAGAACTCGAACGTATTCTTTTGGTGGGAGCATGGAACTTGACGA
 
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rJMSF027M22+          TTTGGATGATGCTGATATTGAAGATATAGAAACAAGTGGTGACTTTGTGTCTGAGTTGTG
rJMFF004G18+          TTTGGATGATGCTGATATTGAAGATATAGAAACAAGTGGTGACTTTGTGTCTGAGTTGTG
                      ____________________________________________________________
consensus             TTTGGATGATGCTGATATTGAAGATATAGAAACAAGTGGTGACTTTGTGTCTGAGTTGTG
 
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rJMSF027M22+          ATGGGAACCACAACTATAGACAAAAAAAAACAACAAATCTTTTAACAGAGGTGTTGTCCC
rJMFF004G18+          ATGGGAACCACAACTATAGACAAAAAAAAACAACAAATCTTTTAACAGAGGTGTTGTCCC
                      ____________________________________________________________
consensus             ATGGGAACCACAACTATAGACAAAAAAAAACAACAAATCTTTTAACAGAGGTGTTGTCCC
 
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rJMSF027M22+          AAGATTTTCTCAGTGGTTAACTTGCTTGTTGTGTAACATTTGTGTTTATAA         
rJMFF004G18+          AAGATTTTCTCAGTGGTTAACTTGCTTGTTGTGTAACATTTGTGTTTATAAGGAAAAAAC
                      ____________________________________________________________
consensus             AAGATTTTCTCAGTGGTTAACTTGCTTGTTGTGTAACATTTGTGTTTATAAGGAAAAAAC