clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004C08 | Sequence | 571 | 008126 (2) | ref|XP_009779705.1| | 3e-69 | PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Nicotiana sylvestris] | 619 | 008126 (2) | ref|XP_009779705.1| | 5e-69 | PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF004C08- AATTTTTTTTATTATAAAT
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consensus AATTTTTTTTATTATAAAT
. : . : . : . : . : . :
JMFF004C08+ TATATAAAGATATACGGAGTACATATTATAT
rJMFF004C08- AAATATATACATTATATATGGATCTTTATTATATAAAGATATACGGAGTACATATTATAT
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consensus AAATATATACATTATATATGGATCTTTATTATATAAAGATATACGGAGTACATATTATAT
. : . : . : . : . : . :
JMFF004C08+ TGTGATGATAAGAAAGATAATTCACGCGACAAGCCGTCTTTATTCACTATACTTATAATA
rJMFF004C08- TGTGATGATAAGAAAGATAATTCACGCGACAAGCCGTCTTTATTCACTATACTTATAATA
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consensus TGTGATGATAAGAAAGATAATTCACGCGACAAGCCGTCTTTATTCACTATACTTATAATA
. : . : . : . : . : . :
JMFF004C08+ TAGATTTTTCAGAGTTTGCTGGTAATATTGATGTTCCTAATTTTAGATTGTTTGGGACTG
rJMFF004C08- TAGATTTTTCAGAGTTTGCTGGTAATATTGATGTTCCTAATTTTAGATTGTTTGGGACTG
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consensus TAGATTTTTCAGAGTTTGCTGGTAATATTGATGTTCCTAATTTTAGATTGTTTGGGACTG
. : . : . : . : . : . :
JMFF004C08+ GTATCCTTAGGTACGGTGACGGTGAGGACGCCATTGTCGACCTGAGCTTTGATTTGATCC
rJMFF004C08- GTATCCTTAGGTACGGTGACGGTGAGGACGCCATTGTCGACCTGAGCTTTGATTTGATCC
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consensus GTATCCTTAGGTACGGTGACGGTGAGGACGCCATTGTCGACCTGAGCTTTGATTTGATCC
. : . : . : . : . : . :
JMFF004C08+ ACCTTCACTCCCTCCGGCAGCTCTATTTCCCGGGAAAACTTCCCCGTTGCTCCGCCTCTC
rJMFF004C08- ACCTTCACTCCCTCCGGCAGCTCTATTTCCCGGGAAAACTTCCCCGTTGCTCCGCCTCTC
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consensus ACCTTCACTCCCTCCGGCAGCTCTATTTCCCGGGAAAACTTCCCCGTTGCTCCGCCTCTC
. : . : . : . : . : . :
JMFF004C08+ TCCGCCACGTGCCAAACCACCTCCTTCTCCTTCCAATTCCCGTGTGCTTCGTCCTTCCCG
rJMFF004C08- TCCGCCACGTGCCAAACCACCTCCTTCTCCTTCCAATTCCCGTGTGCTTCGTCCTTCCCG
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consensus TCCGCCACGTGCCAAACCACCTCCTTCTCCTTCCAATTCCCGTGTGCTTCGTCCTTCCCG
. : . : . : . : . : . :
JMFF004C08+ CCCTCCGCCTTCACCACCAATACGTTCCCGTCTTCCACTTGCACCTTCACGTCCTCCCTG
rJMFF004C08- CCCTCCGCCTTCACCACCAATACGTTCCCGTCTTCCACTTGCACCTTCACGTCCTCCCTG
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consensus CCCTCCGCCTTCACCACCAATACGTTCCCGTCTTCCACTTGCACCTTCACGTCCTCCCTG
. : . : . : . : . : . :
JMFF004C08+ CTATACCCTGGAACGTTGATTTTGAAGACGTGGGCGGTGGGAGACTCGATCCAGTCGAGG
rJMFF004C08- CTATACCCTGGAACGTTGATTTTGAAGACGTGGGCGGTGGGAGACTCGATCCAGTCGAGG
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consensus CTATACCCTGGAACGTTGATTTTGAAGACGTGGGCGGTGGGAGACTCGATCCAGTCGAGG
. : . : . : . : . : . :
JMFF004C08+ AGGGCGGCTGATCCGGGCGGAGCGCGGTGGTAGAATGTAGGACTCCAGAGAAAGCGCCGG
rJMFF004C08- AGGGCGGCTGATCCGGGCGGAGCGCGGTGGTAGAATGTAGGACTCCAGAGAAAGCGCCGG
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consensus AGGGCGGCTGATCCGGGCGGAGCGCGGTGGTAGAATGTAGGACTCCAGAGAAAGCGCCGG
. : . : . : . : . : . :
JMFF004C08+ AAAGGATCGCCGAAGAATGCCGCCATTTTCTCTTGTAAACTGATTTTTCGCAGCTTAAAC
rJMFF004C08- AAAGGATCGCCGAAGAATGCCGCCATTTTCTCTTGTAAACTGATTTTTCGCAGCTTAAAC
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consensus AAAGGATCGCCGAAGAATGCCGCCATTTTCTCTTGTAAACTGATTTTTCGCAGCTTAAAC