Contig 008123:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-                                                                   AATT
                      ____________________________________________________________
consensus                                                                     AATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           CAAACCACTAGTTGTTGCTTTCTCCTATGTTTCTGTCCTGCCGGGATTTCTTATTCGCCG
rJMFF003B20+                                        TTCTGTCCTGCCGGGATTTCTTATTCGCCG
                      ____________________________________________________________
consensus             CAAACCACTAGTTGTTGCTTTCTCCTATGTTTCTGTCCTGCCGGGATTTCTTATTCGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           GAACACCATGAGGGTAACGCCGTTACCGACCACGAACATGACGGCTCTAAACTACTCCGA
rJMFF003B20+          GAACACCATGAGGGTAACGCCGTTACCGACCACGAACATGACGGCTCTAAACTACTCCGA
                      ____________________________________________________________
consensus             GAACACCATGAGGGTAACGCCGTTACCGACCACGAACATGACGGCTCTAAACTACTCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           CGATCCCAAGCTGGACAGAGCCATGGTGGTGGTTCTTGCGTCTCTGCTAGCCGCGCTGCT
rJMFF003B20+          CGATCCCAAGCTGGACAGAGCCATGGTGGTGGTTCTTGCGTCTCTGCTAGCCGCGCTGCT
                      ____________________________________________________________
consensus             CGATCCCAAGCTGGACAGAGCCATGGTGGTGGTTCTTGCGTCTCTGCTAGCCGCGCTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           GCTTGTGCTCGCTGTGAATGCCATCGTCCGCTGCATTATCCGGCGCATTAGACGGCTTAG
rJMFF003B20+          GCTTGTGCTCGCTGTGAATGCCATCGTCCGCTGCATTATCCGGCGCATTAGACGGCTTAG
                      ____________________________________________________________
consensus             GCTTGTGCTCGCTGTGAATGCCATCGTCCGCTGCATTATCCGGCGCATTAGACGGCTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           CCCCCGGGTTCCGGTGCCCTCCGCCGCCCCTCTGCCGCCGCCGACGGCGGCGGGGCTGAA
rJMFF003B20+          CCCCCGGGTTCCGGTGCCCTCCGCCGCCCCTCTGCCGCCGCCGACGGCGGCGGGGCTGAA
                      ____________________________________________________________
consensus             CCCCCGGGTTCCGGTGCCCTCCGCCGCCCCTCTGCCGCCGCCGACGGCGGCGGGGCTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           GGAGGATGCTCTAGAGCAGATTCCGGTGGTGGTTTACAAGTCCGAGGTGGGTATCTTCGG
rJMFF003B20+          GGAGGATGCTCTAGAGCAGATTCCGGTGGTGGTTTACAAGTCCGAGGTGGGTATCTTCGG
                      ____________________________________________________________
consensus             GGAGGATGCTCTAGAGCAGATTCCGGTGGTGGTTTACAAGTCCGAGGTGGGTATCTTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           TACGGAATGTCCGATTTGCCTCACGGAGTTTAATGAAGGACAGAATTTGAGGCTGCTGCC
rJMFF003B20+          TACGGAATGTCCGATTTGCCTCACGGAGTTTAATGAAGGACAGAATTTGAGGCTGCTGCC
                      ____________________________________________________________
consensus             TACGGAATGTCCGATTTGCCTCACGGAGTTTAATGAAGGACAGAATTTGAGGCTGCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           GAGGTGCAGCCATGGCTTCCATTTGAAGTGTATTGATCTGTGGCTTCTGTCTCACTCGTC
rJMFF003B20+          GAGGTGCAGCCATGGCTTCCATTTGAAGTGTATTGATCTGTGGCTTCTGTCTCACTCGTC
                      ____________________________________________________________
consensus             GAGGTGCAGCCATGGCTTCCATTTGAAGTGTATTGATCTGTGGCTTCTGTCTCACTCGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           TTGCCCAACTTGTANGCGGCCATTGCTTGATGATACTCCATAAATCTGTTTGTANTTCAA
rJMFF003B20+          TTGCCCAACTTGTAGGCGGCCATTGCTTGATGATACTCCATAAATCTGTTTGTAGTTCAA
                      ____________________________________________________________
consensus             TTGCCCAACTTGTAGGCGGCCATTGCTTGATGATACTCCATAAATCTGTTTGTAGTTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF003B20-           TGGTACAG                                                    
rJMFF003B20+          TGGTACAGTAGGCAGTACTGAAGAGTAGAGATCAAGGTTCGAATTTCGACGATAATAATG
                      ____________________________________________________________
consensus             TGGTACAGTAGGCAGTACTGAAGAGTAGAGATCAAGGTTCGAATTTCGACGATAATAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF003B20+          CTCTGAAGATTCAACCTTTTGGGAGAAAATACTCCATAAATCTCCTCTTTTACTTCCATT
                      ____________________________________________________________
consensus             CTCTGAAGATTCAACCTTTTGGGAGAAAATACTCCATAAATCTCCTCTTTTACTTCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF003B20+          CAATTCTATTCAATCTTTTGTTTAGTCATGATTCAATGTTTCTTTTAGAATGTCTCTTTA
                      ____________________________________________________________
consensus             CAATTCTATTCAATCTTTTGTTTAGTCATGATTCAATGTTTCTTTTAGAATGTCTCTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF003B20+          ACTTGTGGTGTCCTATGATGTTTTTTTAATTCATTTGAAGCAAATGCTTCTAATAATACA
                      ____________________________________________________________
consensus             ACTTGTGGTGTCCTATGATGTTTTTTTAATTCATTTGAAGCAAATGCTTCTAATAATACA