| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002B18 | Sequence | 726 | 008120 (7) | ref|XP_004240009.1| | 2e-78 | PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Solanum | |||||
| JMSF023L06 | Sequence | 645 | 008120 (7) | ref|XP_004240009.1| | 4e-80 | PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Solanum | 690 | 008120 (7) | ref|XP_004240009.1| | 6e-80 | PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Solanum |
| JMSF041E01 | Sequence | 190 | 008120 (7) | 147 | 008120 (7) | ||||||
| JMSF048H10 | Sequence | 672 | 008120 (7) | ref|XP_004240009.1| | 5e-80 | PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Solanum | 682 | 008120 (7) | ref|XP_004240009.1| | 6e-80 | PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Solanum |
This contig is upended
. : . : . : . : . : . :
JMSF048H10- GGGCTCATTTCTTGGTGGAAGTCTCCCAGGTGTCTCCTGAACAATGGC
rJMSF048H10+ GCTCATTTCTTGGTGGAAGTCTCCCAGGTGTCTCCTGAACAATGGC
JMSF023L06- GCTCATTTCTTGGTGGAAGTCTCCCAGGTGTCTCCTGAACAATGGC
rJMSF023L06+ GCTCATTTCTTGGTGGAAGTCTCCCAGGTGTCTCCTGAACAATGGC
____________________________________________________________
consensus GGGCTCATTTCTTGGTGGAAGTCTCCCAGGTGTCTCCTGAACAATGGC
. : . : . : . : . : . :
JMSF048H10- CTTCTCTGCAGCATTCCGTTGCCCCTCTTCACCTTCTCTTTTCCGCTCGCCAAAGATCTC
rJMSF048H10+ CTTCTCTGCAGCATTCCGTTGCCCCTCTTCACCTTCTCTTTTCCGCTCGCCAAAGATCTC
JMSF023L06- CTTCTCTGCAGCATTCCGTTGCCCCTCTTCACCTTCTCTTTTCCGCTCGCCAAAGATCTC
rJMSF023L06+ CTTCTCTGCAGCATTCCGTTGCCCCTCTTCACCTTCTCTTTTCCGCTCGCCAAAGATCTC
____________________________________________________________
consensus CTTCTCTGCAGCATTCCGTTGCCCCTCTTCACCTTCTCTTTTCCGCTCGCCAAAGATCTC
. : . : . : . : . : . :
JMSF048H10- TGCAATTTCTAGCTCTCATCTGCCGCCATCTTCAATCTGTTTTAGGTCCTCTCCTTCAAG
rJMSF048H10+ TGCAATTTCTAGCTCTCATCTGCCGCCATCTTCAATCTGTTTTAGGTCCTCTCCTTCAAG
JMSF023L06- TGCAATTTCTAGCTCTCATCTGCCGCCATCTTCAATCTGTTTTAGGTCCTCTCCTTCAAG
rJMSF023L06+ TGCAATTTCTAGCTCTCATCTGCCGCCATCTTCAATCTGTTTTAGGTCCTCTCCTTCAAG
rJMFF002B18+ TTCAAG
____________________________________________________________
consensus TGCAATTTCTAGCTCTCATCTGCCGCCATCTTCAATCTGTTTTAGGTCCTCTCCTTCAAG
. : . : . : . : . : . :
JMSF048H10- TATCAATCGCCAGAAATTCCCCTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
rJMSF048H10+ TATCAATCGCCAGAAATTCCCCTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
JMSF023L06- TATCAATCGCCAGAAATTCCCCTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
rJMSF023L06+ TATCAATCGCCAGAAATTCCCCTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
rJMFF002B18+ TATCAATCGCCAGAAATTCCCNTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
____________________________________________________________
consensus TATCAATCGCCAGAAATTCCCCTCTATTCCATTGGCTTCGGTCCAAGCACCACCAGCAGC
. : . : . : . : . : . :
JMSF048H10- TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
rJMSF048H10+ TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
JMSF023L06- TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
rJMSF023L06+ TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
rJMFF002B18+ TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
____________________________________________________________
consensus TGGAGAAGTTGCTCCTGCGATTTCCTTGACAGACAATGCTCTGAAACACCTGAATAAGAT
. : . : . : . : . : . :
JMSF048H10- GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
rJMSF048H10+ GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
JMSF023L06- GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
rJMSF023L06+ GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
rJMFF002B18+ GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
____________________________________________________________
consensus GAGAGCTGATCGGAATGAAGATTTGTTTCTCAGGATTGGTGTCAAGCAAGGAGGATGCTC
. : . : . : . : . : . :
JMSF048H10- TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
rJMSF048H10+ TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
JMSF023L06- TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
rJMSF023L06+ TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
rJMFF002B18+ TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
____________________________________________________________
consensus TGGTATGTCTTATACAATGGAGTTTGAGAGCAGAGAAAATGCTAGACCAGATGATTCTGT
. : . : . : . : . : . :
JMSF048H10- CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
rJMSF048H10+ CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
JMSF023L06- CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
rJMSF023L06+ CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
rJMFF002B18+ CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
____________________________________________________________
consensus CATTGAGTACAATGGCTTTGTGATTGTTTGTGATCCAAAAAGCCTTCTCTTCCTCTTTGG
. : . : . : . : . : . :
JMSF048H10- GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
rJMSF048H10+ GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
JMSF023L06- GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
rJMSF023L06+ GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
rJMFF002B18+ GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
____________________________________________________________
consensus GATGCAGCTGGACTACAGTGATGCACTCATAGGTGGAGGATTCTCTTTCAAGAATCCCAA
. : . : . : . : . : . :
JMSF048H10- CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
rJMSF048H10+ CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
JMSF023L06- CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
rJMSF023L06+ CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
rJMSF041E01+ GATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
JMSF041E01- GATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
rJMFF002B18+ CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
____________________________________________________________
consensus CGCCACACAAACCTGTGGATGTGGTAAATCATTTGCAGCGGAAATGTGATGACATGCACG
. : . : . : . : . : . :
JMSF048H10- CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
rJMSF048H10+ CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
JMSF023L06- CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTG
rJMSF023L06+ CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
rJMSF041E01+ CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
JMSF041E01- CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
rJMFF002B18+ CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATAGTTTCTTGCAA
____________________________________________________________
consensus CTGAATTAATATACTTACACTGGTAGTTCGGATTATAACAATAGATATTGTTTCTTGCAA
. : . : . : . : . : . :
JMSF048H10- TTCGCACAATCCGGTAATGCAGTA
rJMSF048H10+ TTCGCACAATCCGGTAATGCAGTATATGAAAATG
rJMSF023L06+ TTCGCACAATCCGGTAATGCAGTATATGAAAATG
rJMSF041E01+ TTCGCACAATCCGGTAATGCAGTATATGAAAATG
JMSF041E01- TTCGCACAATCCGGTAATGCAGTATATGAAAATGTGAAGACATTGTTTTTATTAATCAAT
rJMFF002B18+ TTCGCACAATCCGGTAATGCAGTATATAAAAATGTGAAGACATTGTTTTTATTAATCAAT
____________________________________________________________
consensus TTCGCACAATCCGGTAATGCAGTATATGAAAATGTGAAGACATTGTTTTTATTAATCAAT
. : . : . : . : . : . :
JMSF041E01- ATGCTACAGTATTTGGTA
rJMFF002B18+ ATGCTACAGTATTTGGTAGTTTGTGGGATGCACGCATCTGATCTCGTAAAATATGAAAAT
____________________________________________________________
consensus ATGCTACAGTATTTGGTAGTTTGTGGGATGCACGCATCTGATCTCGTAAAATATGAAAAT
. : . : . : . : . : . :
rJMFF002B18+ AGATATTCACATGGTAGATGGAGTGTCAAGATTAAAAATTTAGCTTTTGAGTTTTGAGTA
____________________________________________________________
consensus AGATATTCACATGGTAGATGGAGTGTCAAGATTAAAAATTTAGCTTTTGAGTTTTGAGTA
. : . : . : . : . : . :
rJMFF002B18+ TGGACAAGGGGAAATGGAAGAGTATTGGTAACTACAACAGTAAAATTTTATATAAGAGGT
____________________________________________________________
consensus TGGACAAGGGGAAATGGAAGAGTATTGGTAACTACAACAGTAAAATTTTATATAAGAGGT