| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001M02 | Sequence | 606 | 008118 (6) | ref|XP_007135360.1| | 4e-75 | hypothetical protein PHAVU_010G122800g [Phaseolus vulgaris] gb|ESW07354.1| hypot | 693 | 008118 (6) | ref|XP_009606556.1| | 3e-51 | PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Nicotiana tomentosiformis] |
| JMSF012K16 | Sequence | 401 | 008118 (6) | emb|CBI35791.3| | 2e-30 | unnamed protein product [Vitis vinifera] | 797 | 008118 (6) | ref|XP_009606556.1| | 2e-95 | PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Nicotiana tomentosiformis] |
| JMSF029N04 | Sequence | 677 | 008118 (6) | ref|XP_009606556.1| | 1e-110 | PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Nicotiana tomentosiformis] | 691 | 008118 (6) | ref|XP_009606556.1| | 2e-69 | PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF001M02- GTGGGGTTAATATCGTCTTTGCAGAACTGATCTGGATACTGGAGCCTTCCGAATCG
____________________________________________________________
consensus GTGGGGTTAATATCGTCTTTGCAGAACTGATCTGGATACTGGAGCCTTCCGAATCG
. : . : . : . : . : . :
JMFF001M02- AAGAAAAAGCTCACATTGGTTTCAATCGTCTAGACACCGATCATTGGGGAAAAACCTTAA
JMSF012K16- GACACCGATCATTGGGGAAAAACCTTAA
JMSF029N04- GACACCGATCATTGGGGAAAAACCTTAA
____________________________________________________________
consensus AAGAAAAAGCTCACATTGGTTTCAATCGTCTAGACACCGATCATTGGGGAAAAACCTTAA
. : . : . : . : . : . :
JMFF001M02- TCTCAATCAACAGTCAATGCAGTTTCAATCCGTGCTTCATAATATAGATTTCTCGCGCGA
JMSF012K16- TCTCAATCAACAGTCAATGCAGTTTCAATCCGTGCTTCATAATATAGATTTCTCGCGCGA
JMSF029N04- TCTCAATCAACAGTCAATGCAGTTTCAATCCGTGCTTCATAATATAGATTTCTCGCGCGA
____________________________________________________________
consensus TCTCAATCAACAGTCAATGCAGTTTCAATCCGTGCTTCATAATATAGATTTCTCGCGCGA
. : . : . : . : . : . :
JMFF001M02- TTGATCCATGGTAGTCTAGAGAGTAAGAGAAAAACCCAAGATCATCTTTTAGTTCACCAA
JMSF012K16- TTGATCCATGGTAGTCTAGAGAGTAAGAGAAAAACCCAAGATCATCTTTTAGTTCACCAA
JMSF029N04- TTGATCCATGGTAGTCTAGAGAGTAAGAGAAAAACCCAAGATCATCTTTTAGTTCACCAA
____________________________________________________________
consensus TTGATCCATGGTAGTCTAGAGAGTAAGAGAAAAACCCAAGATCATCTTTTAGTTCACCAA
. : . : . : . : . : . :
JMFF001M02- ACTTTGAAGCTAAGGAATGGCGGAAAAAGCATGTATAATGCGCTTGCAAAAGGAATATAG
JMSF012K16- ACTTTGAAGCTAAGGAATGGCGGAAAAAGCATGTATAATGCGCTTGCAAAAGGAATATAG
JMSF029N04- ACTTTGAAGCTAAGGAATGGCGGAAAAAGCATGTATAATGCGCTTGCAAAAGGAATATAG
____________________________________________________________
consensus ACTTTGAAGCTAAGGAATGGCGGAAAAAGCATGTATAATGCGCTTGCAAAAGGAATATAG
. : . : . : . : . : . :
JMFF001M02- AGCACTCTGTAAAGAACCTGTTCCAAACGTTGTGGCCCGGCCATCTCCAAGTGATATCCT
JMSF012K16- AGCACTCTGTAAAGAACCTGTTCCAAACGTTGTGGCCCGGCCATCTCCAAGTGA------
JMSF029N04- AGCACTCTGTAAAGAACCTGTTCCAAACGTTGTGGCCCGGCCATCTCCAAGTGATATCCT
____________________________________________________________
consensus AGCACTCTGTAAAGAACCTGTTCCAAACGTTGTGGCCCGGCCATCTCCAAGTGATATCCT
. : . : . : . : . : . :
JMFF001M02- TGAGTGGCATTATGTATTGGAAGGGTGTGAAGGAACACCTTTTGCAGGTGGATATTATTA
JMSF012K16- -------GATTATGTATTGGAAGGGTGTGAAGGAACACCTTTTGCAGGTGGATATTATTA
JMSF029N04- TGAGTGGCATTATGTATTGGAAGGGTGTGAAGGAACACCTTTTGCAGGTGGATATTATTA
____________________________________________________________
consensus TGAGTGGCATTATGTATTGGAAGGGTGTGAAGGAACACCTTTTGCAGGTGGATATTATTA
. : . : . : . : . : . :
JMFF001M02- TGGAAAGATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAAAATGACAAC
JMSF012K16- TGGAAAGATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAAAATGACAAC
JMSF029N04- TGGAAAGATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAAAATGACAAC
rJMSF012K16+ AAGATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAAAATGACAAC
____________________________________________________________
consensus TGGAAAGATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAAAATGACAAC
. : . : . : . : . : . :
JMFF001M02- TCCAAATGGCCGATTTATGCCAGAAAGGAAAATATGCCTGTCTATGAGTGACTTCCACCC
JMSF012K16- TCCAAATGGCCGATTTATGCCAGA
JMSF029N04- TCCAAATGGCCGATTTATGCCAGAAAGGAAAATATGCCTGTCTATGAGTGACTTCCACCC
rJMSF012K16+ TCCAAATGGCCGATTTATGCCAGAAAGGAAAATATGCCTGTCTATGAGTGACTTCCACCC
rJMSF029N04+ CCACCC
____________________________________________________________
consensus TCCAAATGGCCGATTTATGCCAGAAAGGAAAATATGCCTGTCTATGAGTGACTTCCACCC
. : . : . : . : . : . :
JMFF001M02- AGAGAGTTGGAATCCAATGTGGTCTGTTTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
JMSF029N04- AGAGAGTTGGAATCCAATGTGGTCTGTTTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
rJMSF012K16+ AGAGAGTTGGAATCCAATGTGGTCTGTTTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
rJMSF029N04+ AGAGAGTTGGAATCCAATGTGGTCTGTTTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
rJMFF001M02+ TTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
____________________________________________________________
consensus AGAGAGTTGGAATCCAATGTGGTCTGTTTCAAGCATTCTCACAGGGCTGCTTTCATTCAT
. : . : . : . : . : . :
JMFF001M02- -GATGGATAAT
JMSF029N04- -GATGGATAATAGTCCAACCACAGGCAGTGTAACAACAACAATTGCTGAGAAAGAAAAAC
rJMSF012K16+ -GATGGATAATAGTCCAACCACAGGCAGTGTAACAACAACAATTGCTGAGAAAGAAAAAC
rJMSF029N04+ -GATGGATAATAGTCCAACCACAGGCAGTGTAACAACAACAATTGCTGAGAAAGAAAAAC
rJMFF001M02+ GGATGGATAATAGTCCAACCACAGGCAGTGTAACAACAACAATTGCTGAGAAAGAAAAAC
____________________________________________________________
consensus -GATGGATAATAGTCCAACCACAGGCAGTGTAACAACAACAATTGCTGAGAAAGAAAAAC
. : . : . : . : . : . :
JMSF029N04- TCGCAAAGGTTTCTCTTGCTTACAATTGTAAAAACCCAACCTTTAGGAAGCTGTTTCCAG
rJMSF012K16+ TCGCAAAGGTTTCTCTTGCTTACAATTGTAAAAACCCAACCTTTAGGAAGCTGTTTCCAG
rJMSF029N04+ TCGCAAAGGTTTCTCTTGCTTACAATTGTAAAAACCCAACCTTTAGGAAGCTGTTTCCAG
rJMFF001M02+ TCGCAAAGGTTTCTCTTGCTTACAATTGTAAAAACCCAACCTTTAGGAAGCTGTTTCCAG
____________________________________________________________
consensus TCGCAAAGGTTTCTCTTGCTTACAATTGTAAAAACCCAACCTTTAGGAAGCTGTTTCCAG
. : . : . : . : . : . :
JMSF029N04- AATACGTGGAGAAGTATGAACAGCAGCAGCTTGCTTCACAGCCTGTTC
rJMSF012K16+ AATACGTGGAGAAGTATGAACAGCAGCAGCTTGCTTCACAGCCTGTTCCCAAGCAGGTTC
rJMSF029N04+ AATACGTGGAGAAGTATGAACAGCAGCAGCTTGCTTCACAGCCTGTTCCCAAGCAGGTTC
rJMFF001M02+ AATACGTGGAGAAGTATGAACAGCAGCAGCTTGCTTCACAGCCTGTTCCCAAGCAGGTTC
____________________________________________________________
consensus AATACGTGGAGAAGTATGAACAGCAGCAGCTTGCTTCACAGCCTGTTCCCAAGCAGGTTC
. : . : . : . : . : . :
rJMSF012K16+ CACCTGTGGTAACTCAAATGGAAAGTTCCAGCCCTTTACTAGAGGAACATAGTAATCCTA
rJMSF029N04+ CACCTGTGGTAACTCAAATGGAAAGTTCCAGCCCTTTACTAGAGGAACATAGTAATCCTA
rJMFF001M02+ CACCTGTGGTAACTCAAATGGAAAGTTCCAGCCCTTTACTAGAGGAACATAGTAATCCTA
____________________________________________________________
consensus CACCTGTGGTAACTCAAATGGAAAGTTCCAGCCCTTTACTAGAGGAACATAGTAATCCTA
. : . : . : . : . : . :
rJMSF012K16+ CAAACGAAGATTTGAATAGAGTGGATCTTCCACAACACATGGTTAACCGAAGAAAACAAT
rJMSF029N04+ CAAACGAAGATTTGAATAGAGTGGATCTTCCACAACACATGGTTAACCGAAGAAAACAAT
rJMFF001M02+ CAAACGAAGATTTGAATAGAGTGGATCTTCCACAACACATGGTTAACCGAAGAAAACAAT
____________________________________________________________
consensus CAAACGAAGATTTGAATAGAGTGGATCTTCCACAACACATGGTTAACCGAAGAAAACAAT
. : . : . : . : . : . :
rJMSF012K16+ CTTTCCCGACTTGGCTGTTGCTGCTATTATTCTCAATTTTTGGCGTCGTAATGGCTCTGC
rJMSF029N04+ CTTTCCCGACTTGGCTGTTGCTGCTATTATTCTCAATTTTTGGCGTCGTAATGGCTCTGC
rJMFF001M02+ CTTTCCCGACTTGGCTGTTGCTGCTATTATTCTCAATTTTTGGCGTCGTAATGGCTCTGC
____________________________________________________________
consensus CTTTCCCGACTTGGCTGTTGCTGCTATTATTCTCAATTTTTGGCGTCGTAATGGCTCTGC
. : . : . : . : . : . :
rJMSF012K16+ CTTTGCTTCAGCTTTGATGCTCAGGATCACAACACAACAAAGTCTGGAAGGGCTGTGTGT
rJMSF029N04+ CTTTGCTTCAGCTTTGATGCTCAGGATCACAACACAACAAAGTCTGGAAGGGCTGTGTGT
rJMFF001M02+ CTTTGCTTCAGCTTTGATGCTCAGGATCACAACACAACAAAGTCTGGAAGGGCTGTGTGT
____________________________________________________________
consensus CTTTGCTTCAGCTTTGATGCTCAGGATCACAACACAACAAAGTCTGGAAGGGCTGTGTGT
. : . : . : . : . : . :
rJMSF012K16+ TTCCTTCCCTTTTCTTCTGATTACTTGTGGGCACTTATATCCTAGGTCTTATATAACCAA
rJMSF029N04+ TTCCTTCCCTTTTCTTCTGATTACTTGTGGGCACTTATATCCTAGGTCTTATATAACCAA
rJMFF001M02+ TTCCTTCCCTTTTCTTCTGATTACTTGTGGGCACTTATATCCTAGGTCTTATATAACCAA
____________________________________________________________
consensus TTCCTTCCCTTTTCTTCTGATTACTTGTGGGCACTTATATCCTAGGTCTTATATAACCAA
. : . : . : . : . : . :
rJMSF012K16+ GATGGTGTTTGTATAGGTATATGGTGCAATGGGAGATGAAAAGTGATCTCTCCTGCAATC
rJMSF029N04+ GATGGTGTTTGTATAGGTATATGGTGCAATGGGAGATGAAAAGTGATCTCTCCTGCAATC
rJMFF001M02+ GATGGTGTTTGTATAGGTATATGGTGCAATGGGAGATGAAAAGTGATCTCTCCTGCAATC
____________________________________________________________
consensus GATGGTGTTTGTATAGGTATATGGTGCAATGGGAGATGAAAAGTGATCTCTCCTGCAATC
. : . : . : . : . : . :
rJMSF012K16+ ATCTGATGTGATTATTCTTGCTTTCATGGTGGTTTTGGGTCCACAAGTGATGTGTCAGT
rJMSF029N04+ ATCTGATGTGATTATTCTTGCTTTCATGGTGGTTTTGGGTCCACAAGTGATGTGTCAGTA
rJMFF001M02+ ATCTGATGTGATTATTCTTGCTTTCATGGTGGTTTTGGGTCCACAAGTGATGTGTCAGTA
____________________________________________________________
consensus ATCTGATGTGATTATTCTTGCTTTCATGGTGGTTTTGGGTCCACAAGTGATGTGTCAGTA
. : . : . : . : . : . :
rJMSF029N04+ TTCATAAGTAACTGTTTGGCCAATAG
rJMFF001M02+ TTCATAAGTAACTGTTTGGCCAATAGTACCTCTTCTATTTTAGGAAAACACACTACTATC
____________________________________________________________
consensus TTCATAAGTAACTGTTTGGCCAATAGTACCTCTTCTATTTTAGGAAAACACACTACTATC