| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003I14 | Sequence | 522 | 008111 (9) | ref|XP_009770915.1| | 5e-51 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris] | |||||
| JMFF009D09 | Sequence | 464 | 008111 (9) | ref|XP_002268282.1| | 4e-14 | PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera | 751 | 002928 (7) | ref|XP_009598546.1| | 2e-122 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis |
| JMFF029C11 | Sequence | 450 | 008111 (9) | ref|XP_009359950.1| | 9e-13 | PREDICTED: probable beta-1,3-galactosyltransferase 3 [Pyrus x bretschneideri] | 737 | 002928 (7) | ref|XP_009598546.1| | 2e-119 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis |
| JMFF032H10 | Sequence | 461 | 008111 (9) | ref|XP_002268282.1| | 2e-14 | PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera | 753 | 002928 (7) | ref|XP_009598546.1| | 2e-83 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis |
| JMFF040I14 | Sequence | 451 | 008111 (9) | ref|XP_002268282.1| | 5e-08 | PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Vitis vinifera | 729 | 002928 (7) | gb|KJB80507.1| | 3e-96 | hypothetical protein B456_013G101400 [Gossypium raimondii] |
| JMFF042I11 | Sequence | 657 | 008111 (9) | ref|XP_009770915.1| | 1e-77 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris] | 608 | 002928 (7) | ref|XP_009770915.1| | 6e-47 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris] |
| JMSF027H23 | Sequence | 330 | 008111 (9) | 658 | 002928 (7) | ref|XP_009775718.1| | 5e-54 | PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X2 [Nicotiana sylv | |||
| JMSF036G12 | Sequence | 594 | 008111 (9) | ref|XP_009770915.1| | 2e-50 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris] | 746 | 002928 (7) | ref|XP_009598546.1| | 4e-69 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis |
| JMSF052L01 | Sequence | 655 | 008111 (9) | ref|XP_009770915.1| | 3e-43 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris] | 882 | 016226 | ref|XP_009598546.1| | 7e-106 | PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana tomentosiformis |
This contig is upended
. : . : . : . : . : . :
JMFF042I11+ TTCTTCCTCTTTTCACCTTGTGGCATCCACGTGGTGCGAACTGAATCTCTTC
____________________________________________________________
consensus TTCTTCCTCTTTTCACCTTGTGGCATCCACGTGGTGCGAACTGAATCTCTTC
. : . : . : . : . : . :
JMSF036G12+ CTGCTACTAAATGCAGTGTTTATTCCTATAACCATGAAATATTTTCTTCTTTTAG
JMFF042I11+ GTTTTCTGCTACTAAATGCAGTGTTTATTCCTATAACCATGAAATATTTTCTTCTTTTAG
____________________________________________________________
consensus GTTTTCTGCTACTAAATGCAGTGTTTATTCCTATAACCATGAAATATTTTCTTCTTTTAG
. : . : . : . : . : . :
JMSF036G12+ ATGAACCGCTCTTCTCACCGTCCTCCGACATAGGAGAGCCACTAAGAATTGATTCCTGAG
JMFF003I14+ CCTCCGACATAGGAGAGCCACTAAGAATTGATTCCTGAG
JMFF042I11+ ATGAACCGCTCTTCTCACCGTCCTCCGACATAGGAGAGCCACTAAGAATTGATTCCTGAG
____________________________________________________________
consensus ATGAACCGCTCTTCTCACCGTCCTCCGACATAGGAGAGCCACTAAGAATTGATTCCTGAG
. : . : . : . : . : . :
JMSF036G12+ CCGCCTTTGCAGCAGCCAACTCCATCTCCAAATTCGAAATGGTTTTATCTAGCGTCTGAA
JMFF003I14+ CCGCCTTTGCAGCAGCCAACTCCATCTCCAAATTCGAAATGGTTTTATCTAGCGTCTGAA
JMFF042I11+ CCGCCTTTGCAGCAGCCAACTCCATCTCCAAATTCGAAATGGTTTTATCTAGCGTCTGAA
JMSF052L01+ TTTGCAGCAGCCAACTCCATCTCCAAATTCGAAATGGTTTTATCTAGCGTCTGAA
____________________________________________________________
consensus CCGCCTTTGCAGCAGCCAACTCCATCTCCAAATTCGAAATGGTTTTATCTAGCGTCTGAA
. : . : . : . : . : . :
JMSF036G12+ TGGCATGATGCGTTTTAGAAACTTCCCCAAAAA-GTCTTTGGATACTTTCACATCTTTCG
JMFF003I14+ TGGCATGATGCGTTTTAGAAACTTCCCCAAAAACGTCTTTGGATACTTTCACATCTTTCG
JMFF042I11+ TGGCATGATGCGTTTTAGAAACTTCCCCAAAAACGTCTTTGGATACTTTCACATCTTTCG
JMSF052L01+ TGGCATGATGCGTTTTAGAAACTTCCCCAAAAACGTCTTTGGATACTTTCACATCTTTCG
____________________________________________________________
consensus TGGCATGATGCGTTTTAGAAACTTCCCCAAAAACGTCTTTGGATACTTTCACATCTTTCG
. : . : . : . : . : . :
JMSF036G12+ GCTGCAAATATTTTGTACCGCAACCTTCCGAGATCAACTTCAGACCTTCAGTTTCAGCTG
JMFF003I14+ GCTGCAAATATTTTGTACCGCAACCTTCCGAGATCAACTTCAGACCTTCAGTTTCAGCTG
JMFF042I11+ GCTGCAAATATTTTGTACCGCAACCTTCCGAGATCAACTTCAGACCTTCAGTTTCAGCTG
JMSF052L01+ GCTGCAAATATTTTGTACCGCAACCTTCCGAGATCAACTTCAGACCTTCAGTTTCAGCTG
____________________________________________________________
consensus GCTGCAAATATTTTGTACCGCAACCTTCCGAGATCAACTTCAGACCTTCAGTTTCAGCTG
. : . : . : . : . : . :
JMSF036G12+ AAGGTGTTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF003I14+ AAGGTGTTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF042I11+ AAGGTGTTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF032H10+ TTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF009D09+ TTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF029C11+ TTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMFF040I14+ TTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
JMSF052L01+ AAGGTGTTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
____________________________________________________________
consensus AAGGTGTTATTGTAATCCCTTTTGACTCCGGAACAGTCCACATTCTGTTGGTGAAGAACA
. : . : . : . : . : . :
JMSF036G12+ CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF003I14+ CTCCCGCTCAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF042I11+ CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF032H10+ CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF009D09+ CTCCCGCACAGAAGCTANTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF029C11+ CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMFF040I14+ CTCCCGCACAGAAGCTANTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
JMSF052L01+ CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
____________________________________________________________
consensus CTCCCGCACAGAAGCTACTGATACAAAGCAAAAGCGTCCATTTTTTAGAAATTAGACTTT
. : . : . : . : . : . :
JMSF036G12+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF003I14+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF042I11+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF032H10+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF009D09+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF029C11+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMFF040I14+ TGGAAACCACCTCCCCGCCTCCACCTNTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
JMSF027H23+ TTCACAGACANTTNTGGTTCAAATTCTC
JMSF052L01+ TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
____________________________________________________________
consensus TGGAAACCACCTCCCCGCCTCCACCTCTGCTCTTCACAGACATTTCTGGTTCAAATTCTC
. : . : . : . : . : . :
JMSF036G12+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF003I14+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF042I11+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF032H10+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF009D09+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF029C11+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMFF040I14+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMSF027H23+ TTNTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
JMSF052L01+ TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
____________________________________________________________
consensus TTCTAGCTCCCCCAAAACCTTTACCTCTGTTACCAAAAACCCATTCCCAGAACTGATTGA
. : . : . : . : . : . :
JMSF036G12+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGT
JMFF003I14+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMFF042I11+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMFF032H10+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMFF009D09+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMFF029C11+ AAGGGAGTNAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMFF040I14+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMSF027H23+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
JMSF052L01+ AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
____________________________________________________________
consensus AAGGGAGTTAGTTGTTGGAAGTTGGAACGCACTTTAAGGAAGATACTAAGCTATATTGTA
. : . : . : . : . : . :
JMFF003I14+ AGC
JMFF042I11+ AGCCT
JMFF032H10+ AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
JMFF009D09+ AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
JMFF029C11+ AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
JMFF040I14+ AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
JMSF027H23+ AGCCTGTACCTATGACCCTCTTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
JMSF052L01+ AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
____________________________________________________________
consensus AGCCTGTACCTATGACCTTCCTAGGTGCTATAAAAGGATGCCTTGTTTGAACTTGTGGGT
. : . : . : . : . : . :
JMFF032H10+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
JMFF009D09+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
JMFF029C11+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
JMFF040I14+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
JMSF027H23+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
JMSF052L01+ ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
____________________________________________________________
consensus ATGCATAGTTTGTTCTTTTCTTTTACGGAGTATCCTCTGCCCTCTCTCTCTCTCTCTCTC
. : . : . : . : . : . :
JMFF032H10+ TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGAC
JMFF009D09+ TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGACACT
JMFF029C11+ TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGACACT
JMFF040I14+ TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGACACT
JMSF027H23+ TCTCTATCTCTCTCTAGANGTACAGAACTACACTTTGCAGGGAAGACACTGGGAAC
JMSF052L01+ TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGACACTGGGAACAGCC
____________________________________________________________
consensus TCTCTATCTCTCTCTAGATGTACAGAACTACACTTTGCAGGGAAGACACTGGGAACAGCC