Contig 008108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007D04Sequence436008108 (4)ref|XP_009598257.1|9e-73PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMFS020C07Sequence626008108 (4)ref|XP_009598257.1|2e-69PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMSF003E18Sequence432008108 (4)ref|XP_006363350.1|6e-27PREDICTED: E3 UFM1-protein ligase 1 homolog [Solanum tuberosum]394005851 (2)ref|XP_009598257.1|2e-43PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMSF052F17Sequence692008108 (4)ref|XP_009598257.1|6e-73PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]848005851 (2)ref|XP_009598257.1|6e-121PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS007D04+                                CCCCTTGCAGCACCACGGACCATAGCATTCACCCGTGCA
JMFS020C07+                                                       AGCATTCACCCGTGCA
JMSF052F17+                                       CAGCACCACGGACCATAGCATTCACCCGTGCA
                      ____________________________________________________________
consensus                                  CCCCTTGCAGCACCACGGACCATAGCATTCACCCGTGCA
 
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JMFS007D04+           ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
JMFS020C07+           ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
JMSF052F17+           ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
                      ____________________________________________________________
consensus             ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
 
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JMFS007D04+           CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
JMFS020C07+           CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
JMSF052F17+           CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
                      ____________________________________________________________
consensus             CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
 
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JMFS007D04+           GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
JMFS020C07+           GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
JMSF052F17+           GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
                      ____________________________________________________________
consensus             GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
 
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JMFS007D04+           CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
JMFS020C07+           CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
JMSF003E18+                                             ACATCAGTGATGAGTCACTCGAAACT
JMSF052F17+           CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
                      ____________________________________________________________
consensus             CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
 
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JMFS007D04+           ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMFS020C07+           ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMSF003E18+           ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMSF052F17+           ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
                      ____________________________________________________________
consensus             ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
 
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JMFS007D04+           ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMFS020C07+           ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMSF003E18+           ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMSF052F17+           ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
                      ____________________________________________________________
consensus             ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
 
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JMFS007D04+           GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGA                       
JMFS020C07+           GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
JMSF003E18+           GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
JMSF052F17+           GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
                      ____________________________________________________________
consensus             GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
 
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JMFS020C07+           TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
JMSF003E18+           TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
JMSF052F17+           TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
                      ____________________________________________________________
consensus             TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
 
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JMFS020C07+           GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
JMSF003E18+           GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
JMSF052F17+           GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
                      ____________________________________________________________
consensus             GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
 
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JMFS020C07+           TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
JMSF003E18+           TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
JMSF052F17+           TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
                      ____________________________________________________________
consensus             TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
 
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JMFS020C07+           CGACTGAATG                                                  
JMSF003E18+           CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGC               
JMSF052F17+           CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGCGATCTTAGACCGGGC
                      ____________________________________________________________
consensus             CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGCGATCTTAGACCGGGC