Contig 008107:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047F06+                                                        ACGCAATAACCTCCG
                      ____________________________________________________________
consensus                                                          ACGCAATAACCTCCG
 
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JMFS066G10+                          TTCCGGGAAGATTTCGTTTTTTCTTGCTGGTTGCTTTCGGCGGCG
JMSF047F06+           CATCAGGATCTGGCATTCCGGGAAGATTTCGTTTTTTCTTGCTGGTTGCTTTCGGCGGCG
                      ____________________________________________________________
consensus             CATCAGGATCTGGCATTCCGGGAAGATTTCGTTTTTTCTTGCTGGTTGCTTTCGGCGGCG
 
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JMFS066G10+           GCGCTGCTTGGTTCTCGGAGGAAGAAACGCTGGCTTCGCCGGACCCGGGGGAGTCGTTCT
JMFS053C02+                                    AACGCTGGCTTCGCCGGACCCGGGGGAGTCGTTCT
JMSF047F06+           GCGCTGCTTGGTTCTCGGAGGAAGAAACGCTGGCTTCGCCGGACCCGGGGGAGTCGTTCT
                      ____________________________________________________________
consensus             GCGCTGCTTGGTTCTCGGAGGAAGAAACGCTGGCTTCGCCGGACCCGGGGGAGTCGTTCT
 
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JMFS066G10+           TATCGGCGTCAGTCCGCATATCTATGGAGTAGTTTGTGGTTCTTTAATTTGTAGCGGCTA
JMFS053C02+           TATCGGCGTCAGTCCGCATATCTATGGAGTAGTTTGTGGTTCTTTAATTTGTAGCGGCTA
JMSF047F06+           TATCGGCGTCAGTCCGCATATCTATGGAGTAGTTTGTGGTTCTTTAATTTGTAGCGGCTA
                      ____________________________________________________________
consensus             TATCGGCGTCAGTCCGCATATCTATGGAGTAGTTTGTGGTTCTTTAATTTGTAGCGGCTA
 
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JMFS066G10+           AAAGGGGAAAATCATACGCATATCGTTGGCCAAAGTTGAAGATATGAACTTTCCGGCTAG
JMFS053C02+           AAAGGGGAAAATCATACGCATATCGTTGGCCAAAGTTGAAGATATGAACTTTCCGGCTAG
JMSF047F06+           AAAGGGGAAAATCATACGCATATCGTTGGCCAAAGTTGAAGATATGAACTTTCCGGCTAG
                      ____________________________________________________________
consensus             AAAGGGGAAAATCATACGCATATCGTTGGCCAAAGTTGAAGATATGAACTTTCCGGCTAG
 
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JMFS066G10+           GGTTCCGATTGCAGCTAGCTTTCTGCGCTCGCAACCAGCTCCGATCAAGTTCTGACCGCA
JMFS053C02+           GGTTCCGATTGCAGCTAGCTTTCTGCGCTCGCAACCAGCTCCGATCAAGTTCTGACCGCA
JMSF047F06+           GGTTCCGATTGCAGCTAGCTTTCTGCGCTCGCAACCAGCTCCGATCAAGTTCTGACCGCA
                      ____________________________________________________________
consensus             GGTTCCGATTGCAGCTAGCTTTCTGCGCTCGCAACCAGCTCCGATCAAGTTCTGACCGCA
 
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JMFS066G10+           ACCCAGATACTAAACCAAGCTACTTAGCAAAACCCTGTTTCGTAATCAGCTATGGAGAAC
JMFS053C02+           ACCCAGATACTAAACCAAGCTACTTAGCAAAACCCTGTTTCGTAATCAGCTATGGAGAAC
JMSF047F06+           ACCCAGATACTAAACCAAGCTACTTAGCAAAACCCTGTTTCGTAATCAGCTATGGAGAAC
JMSF052F10+                                 CTTAGCAAAACCCTGTTTNGTAATCAGCTATGGAGAAC
                      ____________________________________________________________
consensus             ACCCAGATACTAAACCAAGCTACTTAGCAAAACCCTGTTTCGTAATCAGCTATGGAGAAC
 
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JMFS066G10+           AAAATTACCAGTCACCGGAAAACATTCCCCGGCGGTTCAGCTCAGCTTAACACCGTCGGA
JMFS053C02+           AAAATTACCAGTCACCGGAAAACATTCCCCGGCGGTTCAGCTCAGCTTAACACCGTCGGA
JMSF047F06+           AAAATTACCAGTCACCGGAAAACATTCCCCGGCGGTTCAGCTCAGCTTAACACCGTCGGA
JMSF005N10+                                               TCAGCTCAGCTTAACACCGTCGGA
JMSF052F10+           AAAATTACCAGTCACCGGAAAACATTCCCCGGCGGTTCAGNTCAGCTTAACNCCGTCGGA
                      ____________________________________________________________
consensus             AAAATTACCAGTCACCGGAAAACATTCCCCGGCGGTTCAGCTCAGCTTAACACCGTCGGA
 
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JMFS066G10+           AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
JMFS053C02+           AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
JMSF047F06+           AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
JMSF005N10+           AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
JMSF052F10+           AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
                      ____________________________________________________________
consensus             AAAAAACAAGTCCGAAAATTTCCAGCTTTACCCAAATGGGTTTCTAGCAAAAGTGAGATT
 
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JMFS066G10+           CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTCTATAGAACTTCTC
JMFS053C02+           CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTCTATAGAACTTCTC
JMSF047F06+           CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTCTATAGAACTTCTC
JMSF005N10+           CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTCTATAGAACTTCTC
JMSF052F10+           CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTNTATAGAACTTNTC
                      ____________________________________________________________
consensus             CAGCTAAAATTCCAAGGCACCGAAAGTCCAGTTATCCCTACCGCTTCTATAGAACTTCTC
 
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JMFS066G10+           AGTCGCCGGAACCCCGGACCCGTTCTTGATCTTCCGGCGAAGTTTTTCAAGAACCCACCG
JMFS053C02+           AGTCGCCGGAACCCCGGACCCGTTCTTGATCTTCCGGCGAAGTTTTTCAAGAACCCACCG
JMSF047F06+           AGTCGCCGGAACCCCGGACCCGTTCTTGATCTTCCGGCGAAGTTTTTCAAGAACCCACCG
JMSF005N10+           AGTCGCCGGAACCCCGGACCCGTTCTTGATCTTCCGGCGAAGTTTTTCAAGAACCCACCG
JMSF052F10+           AGTCGCCGGAACCCCGGNCCCGTTNTTGATCTTCCGGCGAAGTTTTTCAAGAACCCNCCG
                      ____________________________________________________________
consensus             AGTCGCCGGAACCCCGGACCCGTTCTTGATCTTCCGGCGAAGTTTTTCAAGAACCCACCG
 
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JMFS066G10+           GTTTTGGGCTGCTCGAAAATCTAGAGAGAG                              
JMFS053C02+           GTTTTGGGCTGCTCGAAAATCTAGAGAGAGAGAAAGAGGAGAAACTAGAGAGAGAACTGA
JMSF047F06+           GTTTTGGGCTGCTCGAAAATCTAGAGAGAGAGAGAGAGGAGAAACTAGAGAGAGAACTGA
JMSF005N10+           GTTTTGGGCTGCTCGAAAATCTAGAGAGAGAGAGAGAGGAGAAACTAGAGAGAGAACTGA
JMSF052F10+           GTTTTGGGCTGCTCGAAAATNTAGAGAGAGAGAGAGAGGAGAAACTAGAGAGAGAACTGA
                      ____________________________________________________________
consensus             GTTTTGGGCTGCTCGAAAATCTAGAGAGAGAGAGAGAGGAGAAACTAGAGAGAGAACTGA
 
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JMFS053C02+           GGGACAGCAAGCTAGCAAAGTC                                      
JMSF047F06+           GGGACAGCAAGCTAGCAAAGTC                                      
JMSF005N10+           GGGACAGCAAGCTAGCAAAGTCCTTTGATTTGGGTGCT                      
JMSF052F10+           GGGACAGCAAGCTAGCAAAGTCCTTTGATTTGGGTGCTAATTCACTNTACTTTTTCAGAG
                      ____________________________________________________________
consensus             GGGACAGCAAGCTAGCAAAGTCCTTTGATTTGGGTGCTAATTCACTNTACTTTTTCAGAG
 
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JMSF052F10+           CCTAAGAAAAAAAAAATTTCCGACATAATCAAAAAATTACGAGGTAATTAAAGGAGAGAT
                      ____________________________________________________________
consensus             CCTAAGAAAAAAAAAATTTCCGACATAATCAAAAAATTACGAGGTAATTAAAGGAGAGAT
 
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JMSF052F10+           TAGAGTTATAAAAACGGCAATTAAAGATGAAAGCTCTCACCGGTCGGGCAGAGGTTCCCC
                      ____________________________________________________________
consensus             TAGAGTTATAAAAACGGCAATTAAAGATGAAAGCTCTCACCGGTCGGGCAGAGGTTCCCC