Contig 008104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS075B10Sequence627008104 (3)ref|XP_009604088.1|312PREDICTED: uncharacterized protein LOC104098935 [Nicotiana tomentosiformis]
JMSF037B13Sequence662008104 (3)ref|XP_009604088.1|324PREDICTED: uncharacterized protein LOC104098935 [Nicotiana tomentosiformis]706005759 (2)ref|XP_009594410.1|233PREDICTED: uncharacterized protein LOC104090912 [Nicotiana tomentosiformis]
JMSF052B21Sequence659008104 (3)ref|XP_009604088.1|321PREDICTED: uncharacterized protein LOC104098935 [Nicotiana tomentosiformis]849005759 (2)ref|XP_004230264.1|6e-88PREDICTED: uncharacterized protein LOC101261459 isoform X2 [Solanum lycopersicu

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+                                                                     CT
                      ____________________________________________________________
consensus                                                                       CT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           ATGCACCATATACAAAAATCCTTTATACCGCTGCCTTGCTGCTATGAGATATACAATCTC
JMFS075B10+                           AATCCTTTATACCGCTGCCTTGCTGCTATGAGATATACAATCTC
JMSF052B21+            TGCACCATATACAAAAATCCTTTATACCGCTGCCTTGCTGCTATGAGATATACAATCTC
                      ____________________________________________________________
consensus             ATGCACCATATACAAAAATCCTTTATACCGCTGCCTTGCTGCTATGAGATATACAATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           AGAACAATACGGCTCTGTAAATTTAGTGTACAAAAATCTCTGCTTCGATACTTCCTCCAG
JMFS075B10+           AGAACAATACGGCTCTGTAAATTTAGTGTACAAAAATCTCTGCTTCGATACTTCCTCCAG
JMSF052B21+           AGAACAATACGGCTCTGTAAATTTAGTGTACAAAAATCTCTGCTTCGATACTTCCTCCAG
                      ____________________________________________________________
consensus             AGAACAATACGGCTCTGTAAATTTAGTGTACAAAAATCTCTGCTTCGATACTTCCTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           CAGATCTTCCTGAACAGTGGAAACCCGGTTTTCCATGTTCGAATCACATTCATTCTCAAA
JMFS075B10+           CAGATCTTCCTGAACAGTGGAAACCCGGTTTTCCATGTTCGAATCACATTCATTCTCAAA
JMSF052B21+           CAGATCTTCCTGAACAGTGGAAACCCGGTTTTCCATGTTCGAATCACATTCATTCTCAAA
                      ____________________________________________________________
consensus             CAGATCTTCCTGAACAGTGGAAACCCGGTTTTCCATGTTCGAATCACATTCATTCTCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           AGGCTCAGATGGGTACCTAGAAAGCCAAATTTCTCTGCATCTATTCAATGCATAATCTTC
JMFS075B10+           AGGCTCAGATGGGTACCTAGAAAGCCAAATTTCTCTGCATCTATTCAATGCATAATCTTC
JMSF052B21+           AGGCTCAGATGGGTACCTAGAAAGCCAAATTTCTCTGCATCTATTCAATGCATAATCTTC
                      ____________________________________________________________
consensus             AGGCTCAGATGGGTACCTAGAAAGCCAAATTTCTCTGCATCTATTCAATGCATAATCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           ATTTTCTTCATTAAAAATGGTGGCTTTTCCAATGACTTTCGAGAATCTTGACTCACAATA
JMFS075B10+           ATTTTCTTCATTAAAAATGGTGGCTTTTCCAATGACTTTCGAGAATCTTGACTCACAATA
JMSF052B21+           ATTTTCTTCATTAAAAATGGTGGCTTTTCCAATGACTTTCGAGAATCTTGACTCACAATA
                      ____________________________________________________________
consensus             ATTTTCTTCATTAAAAATGGTGGCTTTTCCAATGACTTTCGAGAATCTTGACTCACAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           TTGCCTATAACTGACAGGGTTTAAGGAGTGACAGAACCAAACCCATTCAATATCAACAGG
JMFS075B10+           TTGCCTATAACTGACAGGGTTTAAGGAGTGACAGAACCAAACCCATTCAATATCAACAGG
JMSF052B21+           TTGCCTATAACTGACAGGGTTTAAGGAGTGACAGAACCAAACCCATTCAATATCAACAGG
                      ____________________________________________________________
consensus             TTGCCTATAACTGACAGGGTTTAAGGAGTGACAGAACCAAACCCATTCAATATCAACAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           AGGGAGAATCATGGGGGGTGTGGATCCATTTGTGAGGTCATATATCAAGGGCATCCATAG
JMFS075B10+           AGGGAGAATCATGGGGGGTGTGGATCCATTTGTGAGGTCATATATCAAGGGCATCCATAG
JMSF052B21+           AGGGAGAATCATGGGGGGTGTGGATCCATTTGTGAGGTCATATATCAAGGGCATCCATAG
                      ____________________________________________________________
consensus             AGGGAGAATCATGGGGGGTGTGGATCCATTTGTGAGGTCATATATCAAGGGCATCCATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           CTGATCATATCTTCTAATGGATTCAAGAATGGCTGGAGTTTGGTGAAGAAAGGGAGATTC
JMFS075B10+           CTGATCATATCTTCTAATGGATTCAAGAATGGCTGGAGTTTGGTGAAGAAAGGGAGATTC
JMSF052B21+           CTGATCATATCTTCTAATGGATTCAAGAATGGCTGGAGTTTGGTGAAGAAAGGGAGATTC
                      ____________________________________________________________
consensus             CTGATCATATCTTCTAATGGATTCAAGAATGGCTGGAGTTTGGTGAAGAAAGGGAGATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           TGCAATGAATTTTAGGAACCCAAGATTCCTCCTTGCAGCAGCTACAAGATCCACAGTGAT
JMFS075B10+           TGCAATGAATTTTAGGAACCCAAGATTCCTCCTTGCAGCAGCTACAAGATCCACAGTGAT
JMSF052B21+           TGCAATGAATTTTAGGAACCCAAGATTCCTCCTTGCAGCAGCTACAAGATCCACAGTGAT
                      ____________________________________________________________
consensus             TGCAATGAATTTTAGGAACCCAAGATTCCTCCTTGCAGCAGCTACAAGATCCACAGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           TCTGAGCGTGTCCTCCTCTGATAATTCACTAAATTTTAGGCTCCTCACAGAAGCAGAAGC
JMFS075B10+           TCTGAGCGTGTCCTCCTCTGATAATTCACTAAATTTTAGGCTCCTCACAGAAGCAGAAGC
JMSF052B21+           TCTGAGCGTGTCCTCCTCTGATAATTCACTAAATTTTAGGCTCCTCACAGAAGCAGAAGC
                      ____________________________________________________________
consensus             TCTGAGCGTGTCCTCCTCTGATAATTCACTAAATTTTAGGCTCCTCACAGAAGCAGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037B13+           AGAAGCTCCATCACAAGCTGACATTCTTGGGAGCTCTGTTTAATTAATGTTTATG     
JMFS075B10+           AGAAGCTCCATCACAAGCTGACATTCTTGGGAGCTCTGTTTAA                 
JMSF052B21+           AGAAGCTCCATCACAAGCTGACATTCTTGGGAGCTCTGTTTAATTAATGTTTATGTGACC
                      ____________________________________________________________
consensus             AGAAGCTCCATCACAAGCTGACATTCTTGGGAGCTCTGTTTAATTAATGTTTATGTGACC