Contig 008095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035N03Sequence638008095 (3)ref|XP_009764879.1|4e-92PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy711008653 (3)emb|CBI25424.3|3e-51unnamed protein product [Vitis vinifera]
JMSF047F13Sequence568008095 (3)ref|XP_009764879.1|1e-64PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy798008653 (3)emb|CBI25424.3|1e-51unnamed protein product [Vitis vinifera]
JMSF050P04Sequence436008095 (3)ref|XP_009764879.1|4e-28PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy444008653 (3)ref|XP_010658222.1|1e-19PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X2 [Vitis vinife

Alignment

This contig is upended


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JMSF035N03+                 ATAGTAGTTTGTCAGCAATAATTACCCCTTCATCCCACTCCAGGATAAAAGTCC
                      ____________________________________________________________
consensus                   ATAGTAGTTTGTCAGCAATAATTACCCCTTCATCCCACTCCAGGATAAAAGTCC
 
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JMSF047F13+                         CCATGCTTGTGAGCAGTGNTGGTCCATCAAGGAGGCGGCAGAGTAA
JMSF035N03+           CAAGTACCTTAACGCCATGCTTGTGAGCAGTGTTGGTCCAGCAAGGAGGCGGCAGAGTAA
                      ____________________________________________________________
consensus             CAAGTACCTTAACGCCATGCTTGTGAGCAGTGTTGGTCCATCAAGGAGGCGGCAGAGTAA
 
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JMSF047F13+           CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
JMSF035N03+           CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
                      ____________________________________________________________
consensus             CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
 
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JMSF047F13+           CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGC
JMSF035N03+           CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGT
                      ____________________________________________________________
consensus             CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGT
 
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JMSF047F13+           GACAAACCAGAATCCTCGGCCGCTCCGNCAGCGNGCCGGCGGGAGNTGCGGGGAGCTTGA
JMSF035N03+           GACAAACCAGAATCCTCGGCCGCTCCGGCAGCGGGCCGGCGGGAGCTGCGGGGAGCTTGA
JMSF050P04+                                                         TGCGGGGAGCTTGA
                      ____________________________________________________________
consensus             GACAAACCAGAATCCTCGGCCGCTCCGGCAGCGGGCCGGCGGGAGCTGCGGGGAGCTTGA
 
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JMSF047F13+           NGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
JMSF035N03+           CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
JMSF050P04+           CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
                      ____________________________________________________________
consensus             CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
 
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JMSF047F13+           CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
JMSF035N03+           CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
JMSF050P04+           CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
                      ____________________________________________________________
consensus             CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
 
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JMSF047F13+           CATCGCCGGAGGANTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
JMSF035N03+           CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
JMSF050P04+           CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
                      ____________________________________________________________
consensus             CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
 
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JMSF047F13+           AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
JMSF035N03+           AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
JMSF050P04+           AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
                      ____________________________________________________________
consensus             AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
 
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JMSF047F13+           GGAATGGGGATAGCATCGGATAACAAACNCCGGATTTGTAAAGAGCATTGGGTGAGAATC
JMSF035N03+           GGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
JMSF050P04+           NGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
                      ____________________________________________________________
consensus             GGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
 
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JMSF047F13+           CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATAC                     
JMSF035N03+           CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATAC                     
JMSF050P04+           CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATACAACTGACTTTAGAGTAAACGG
                      ____________________________________________________________
consensus             CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATACAACTGACTTTAGAGTAAACGG
 
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JMSF050P04+           AAAGGAACTTTTGGATTGGAAATTACTCGTCTCCCGCCATTCATGGCGGTGTTTCCCCCC
                      ____________________________________________________________
consensus             AAAGGAACTTTTGGATTGGAAATTACTCGTCTCCCGCCATTCATGGCGGTGTTTCCCCCC