clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF035N03 | Sequence | 638 | 008095 (3) | ref|XP_009764879.1| | 4e-92 | PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy | 711 | 008653 (3) | emb|CBI25424.3| | 3e-51 | unnamed protein product [Vitis vinifera] |
JMSF047F13 | Sequence | 568 | 008095 (3) | ref|XP_009764879.1| | 1e-64 | PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy | 798 | 008653 (3) | emb|CBI25424.3| | 1e-51 | unnamed protein product [Vitis vinifera] |
JMSF050P04 | Sequence | 436 | 008095 (3) | ref|XP_009764879.1| | 4e-28 | PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Nicotiana sy | 444 | 008653 (3) | ref|XP_010658222.1| | 1e-19 | PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X2 [Vitis vinife |
This contig is upended
. : . : . : . : . : . :
JMSF035N03+ ATAGTAGTTTGTCAGCAATAATTACCCCTTCATCCCACTCCAGGATAAAAGTCC
____________________________________________________________
consensus ATAGTAGTTTGTCAGCAATAATTACCCCTTCATCCCACTCCAGGATAAAAGTCC
. : . : . : . : . : . :
JMSF047F13+ CCATGCTTGTGAGCAGTGNTGGTCCATCAAGGAGGCGGCAGAGTAA
JMSF035N03+ CAAGTACCTTAACGCCATGCTTGTGAGCAGTGTTGGTCCAGCAAGGAGGCGGCAGAGTAA
____________________________________________________________
consensus CAAGTACCTTAACGCCATGCTTGTGAGCAGTGTTGGTCCATCAAGGAGGCGGCAGAGTAA
. : . : . : . : . : . :
JMSF047F13+ CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
JMSF035N03+ CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
____________________________________________________________
consensus CCAAATTGTGCGAGAAGTAAACGAACACATCCATCAAATACCAATGCCATATAGCATAAG
. : . : . : . : . : . :
JMSF047F13+ CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGC
JMSF035N03+ CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGT
____________________________________________________________
consensus CATCGGGATTACTACCGCCCTGTATCCACTTATCATCAAGGTACCCTCCCTCCATGTCGT
. : . : . : . : . : . :
JMSF047F13+ GACAAACCAGAATCCTCGGCCGCTCCGNCAGCGNGCCGGCGGGAGNTGCGGGGAGCTTGA
JMSF035N03+ GACAAACCAGAATCCTCGGCCGCTCCGGCAGCGGGCCGGCGGGAGCTGCGGGGAGCTTGA
JMSF050P04+ TGCGGGGAGCTTGA
____________________________________________________________
consensus GACAAACCAGAATCCTCGGCCGCTCCGGCAGCGGGCCGGCGGGAGCTGCGGGGAGCTTGA
. : . : . : . : . : . :
JMSF047F13+ NGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
JMSF035N03+ CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
JMSF050P04+ CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
____________________________________________________________
consensus CGGAGGCCTTGTTGAACGGGAAGTGAAAGGAGTCGAAGTAGGATCTAGACTCGAGCTCTT
. : . : . : . : . : . :
JMSF047F13+ CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
JMSF035N03+ CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
JMSF050P04+ CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
____________________________________________________________
consensus CCAGAGTTTTCAGCGGGTAAGAGATCGGAATTGATGGAACTGAAGGATCGAACGGCGGTG
. : . : . : . : . : . :
JMSF047F13+ CATCGCCGGAGGANTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
JMSF035N03+ CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
JMSF050P04+ CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
____________________________________________________________
consensus CATCGCCGGAGGAGTTGGACTCGGCCATTGGATTGAAAGCAGAGACGAAACGGAGGAGAG
. : . : . : . : . : . :
JMSF047F13+ AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
JMSF035N03+ AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
JMSF050P04+ AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
____________________________________________________________
consensus AATCGAGACGAGATTTGAACTTCGCTAGGGTATGGCGGTGGCGGGATTTTACATATGATC
. : . : . : . : . : . :
JMSF047F13+ GGAATGGGGATAGCATCGGATAACAAACNCCGGATTTGTAAAGAGCATTGGGTGAGAATC
JMSF035N03+ GGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
JMSF050P04+ NGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
____________________________________________________________
consensus GGAATGGGGATAGCATCGGATAACAAACGCCGGATTTGTAAAGAGCATTGGGTGAGAATC
. : . : . : . : . : . :
JMSF047F13+ CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATAC
JMSF035N03+ CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATAC
JMSF050P04+ CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATACAACTGACTTTAGAGTAAACGG
____________________________________________________________
consensus CATGAACGCAGTTGACCGTTGAAGTGAACGTTGAGATACAACTGACTTTAGAGTAAACGG
. : . : . : . : . : . :
JMSF050P04+ AAAGGAACTTTTGGATTGGAAATTACTCGTCTCCCGCCATTCATGGCGGTGTTTCCCCCC
____________________________________________________________
consensus AAAGGAACTTTTGGATTGGAAATTACTCGTCTCCCGCCATTCATGGCGGTGTTTCCCCCC