Contig 008088:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031A09Sequence555012913 (9)ref|XP_010270927.1|138PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]753008088 (9)ref|XP_009617529.1|372PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMFF044J21Sequence637012913 (9)ref|XP_010270927.1|184PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]584008088 (9)ref|XP_009617529.1|277PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF003C05Sequence363012913 (9)ref|XP_010270927.1|135PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]716008088 (9)ref|XP_009617529.1|374PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF012L13Sequence236012913 (9)729008088 (9)ref|XP_009773068.1|365PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF042J16Sequence839012913 (9)ref|XP_010270927.1|291PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]795008088 (9)ref|XP_009773068.1|373PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF045N24Sequence774012913 (9)ref|XP_010270927.1|277PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]733008088 (9)ref|XP_009617529.1|368PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF047J13Sequence675012913 (9)ref|XP_010270927.1|207PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]762008088 (9)ref|XP_009773068.1|391PREDICTED: uncharacterized protein LOC104223342 [Nicotiana sylvestris]
JMSF050D22Sequence670008088 (9)ref|XP_009617529.1|328PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]
JMSF051A03Sequence687012913 (9)ref|XP_010270927.1|205PREDICTED: uncharacterized protein LOC104607107, partial [Nelumbo nucifera]732008088 (9)ref|XP_009617529.1|372PREDICTED: uncharacterized protein LOC104109859 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042J16+ CACTTCA
                      ____________________________________________________________
consensus CACTTCA
 
. : . : . : . : . : . :
rJMSF047J13+ GTCAAAGCCACTGTGCAGATCGCTCGTCTCAC-TTTCGA
rJMSF051A03+ CGA
rJMSF012L13+ CGA
rJMSF042J16+ ATAGGNCCTATATTCGAGTCCGTCAAAGCCACTGTGCAGATCGCTCGTCTCACNTTTCGA
                      ____________________________________________________________
consensus ATAGGNCCTATATTCGAGTCCGTCAAAGCCACTGTGCAGATCGCTCGTCTCACNTTTCGA
 
. : . : . : . : . : . :
rJMSF047J13+ TCCTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
rJMSF051A03+ TCCTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
rJMSF003C05+ GACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
rJMSF012L13+ TCCTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
rJMSF045N24+ AAATTTGACCGACGATGGCGATGATGATTCAGACGAAATTCCCCGTGGAAATCA
rJMSF042J16+ TCCTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
rJMFF031A09+ CTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
                      ____________________________________________________________
consensus TCCTTCAAATTTGACCGACGATGGCGATGATGATTCAGACGAAA-TCCCCGTGGAAATCA
 
. : . : . : . : . : . :
rJMSF047J13+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMSF051A03+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMSF003C05+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMSF012L13+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMSF045N24+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMSF042J16+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
rJMFF031A09+ AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
JMSF050D22- GCCTGACGGAA
                      ____________________________________________________________
consensus AGGTTTTGACGAAAGAAACCACCGGCAATAACGCATTTCCGTCTTGCTCGCCTGACGGAA
 
. : . : . : . : . : . :
rJMSF047J13+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMSF051A03+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMSF003C05+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMSF012L13+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMSF045N24+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMSF042J16+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
rJMFF031A09+ AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
JMSF050D22- AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
                      ____________________________________________________________
consensus AACACATCGTCTTTCGTTCTGGCCGGTCCGGCCACAAAAATCTCTACATAATCGATTCTC
 
. : . : . : . : . : . :
rJMSF047J13+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMSF051A03+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMSF003C05+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMSF012L13+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMSF045N24+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMSF042J16+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMFF031A09+ TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
rJMFF044J21+ GAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
JMSF050D22- TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
                      ____________________________________________________________
consensus TCAATGGCGAATTAGACGGCGGCGGAATCCGGCAGTTAACAGATGGAGCTTGGATTGATA
 
. : . : . : . : . : . :
rJMSF047J13+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMSF051A03+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMSF003C05+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMSF012L13+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMSF045N24+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMSF042J16+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMFF031A09+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
rJMFF044J21+ CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
JMSF050D22- CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
                      ____________________________________________________________
consensus CCATGCCTAGCTGGTCACCGGACGGAAAATTGATCGCGTTCTCCTCCAACAGACACAACC
 
. : . : . : . : . : . :
rJMSF047J13+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMSF051A03+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMSF003C05+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMSF012L13+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMSF045N24+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMSF042J16+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMFF031A09+ CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
rJMFF044J21+ CAGGCAACGCCGACTGTTTTAGCATTTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
JMSF050D22- CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
                      ____________________________________________________________
consensus CAGGCAACGCCGACTGTTTTAGCATCTACGTCGTTCGTCCGGACGGAACAGGTCTCCGTA
 
. : . : . : . : . : . :
rJMSF047J13+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMSF051A03+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMSF003C05+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMSF012L13+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMSF045N24+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMSF042J16+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
rJMFF031A09+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGGCTGAATCATG
rJMFF044J21+ GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
JMSF050D22- GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
                      ____________________________________________________________
consensus GAATCCACGTGGCAGGAGCGGAAGGATCGGAGGAGGTGAACAGAGAGAGACTGAATCATG
 
. : . : . : . : . : . :
rJMSF047J13+ TGTGTTTCAGTCCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMSF051A03+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMSF003C05+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMSF012L13+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMSF045N24+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMSF042J16+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMFF031A09+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
rJMFF044J21+ TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
JMSF050D22- TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
                      ____________________________________________________________
consensus TGTGTTTCAGTTCGGACAGTGAGTGGGTGCTGTTCACGGCGAACTTGGGCGGCGTGACGG
 
. : . : . : . : . : . :
rJMSF047J13+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMSF051A03+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMSF003C05+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMSF012L13+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMSF045N24+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMSF042J16+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMFF031A09+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
rJMFF044J21+ CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
JMSF050D22- CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
                      ____________________________________________________________
consensus CGGAGCCGGTGTCGATACCCAACCAGTTTCAGCCCTACGGTGACCTATACATGATGAGGT
 
. : . : . : . : . : . :
rJMSF047J13+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMSF051A03+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMSF003C05+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMSF012L13+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMSF045N24+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMSF042J16+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMFF031A09+ TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
rJMFF044J21+ TAGACGGGACGGGACTGCAGGGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
JMSF050D22- TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
                      ____________________________________________________________
consensus TAGACGGGACGGGACTGCAGAGGCTGACGTGGAATGGATATGAGAATGGCACGCCAGCGT
 
. : . : . : . : . : . :
rJMSF047J13+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMSF051A03+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMSF003C05+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMSF012L13+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMSF045N24+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMSF042J16+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMFF031A09+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
rJMFF044J21+ GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
JMSF050D22- GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
                      ____________________________________________________________
consensus GGCACCCCAAAGCTGAGGTGGACTTGGCTCGCCTCTCCTTGGGCAAGAGCGGTGAAAAGT
 
. : . : . : . : . : . :
rJMSF047J13+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMSF051A03+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMSF003C05+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMSF012L13+ TGAGAGGCAAATTTGATGAACCCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMSF045N24+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMSF042J16+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMFF031A09+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
rJMFF044J21+ TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
JMSF050D22- TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
                      ____________________________________________________________
consensus TGAGAGGCAAATTTGATGAA-CCCTTGTGGATTAACTCTGATTTTTAACTTTTGTTGCCG
 
. : . : . : . : . : . :
rJMSF047J13+ CAAAAT
rJMSF051A03+ CAAAATAAAA
rJMSF003C05+ CAAAATAAAA
rJMSF012L13+ CAAAATA
rJMSF045N24+ CAAAATA
rJMSF042J16+ CAAAATAAAA
rJMFF031A09+ CAAAATAAAAACTGAATAATTATAATAA
rJMFF044J21+ CAAAATAAAAACTGAATAATTATAATAATAAAGAAAGAGGTTGGTTGAGCAA
JMSF050D22- CAAAATAAAAACTGAATAATTATAATAATAAAGAAAGAGGTTGGTTGAGCAAAAAAAAAA
                      ____________________________________________________________
consensus CAAAATAAAAACTGAATAATTATAATAATAAAGAAAGAGGTTGGTTGAGCAAAAAAAAAA