Contig 008087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014I17Sequence100008087 (8)
JMFF034C20Sequence586007425 (2)637008087 (8)gb|KHN13833.1|5e-58Putative importin-7 like [Glycine soja]
JMSF005N24Sequence356007425 (2)351008087 (8)ref|XP_009613928.1|7e-41PREDICTED: probable importin-7 homolog [Nicotiana tomentosiformis]
JMSF040F10Sequence670015823854008087 (8)ref|XP_007033982.1|5e-70Importin-7, putative isoform 1 [Theobroma cacao] gb|EOY04908.1| Importin-7, puta
JMSF041H16Sequence250008087 (8)205008087 (8)
JMSF050D10Sequence160008087 (8)114008087 (8)

Alignment

This contig is upended


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rJMSF040F10+                                                                  TTCT
                      ____________________________________________________________
consensus                                                                     TTCT
 
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rJMSF040F10+          GCAGTAAGCTAGCTAGCTAGCTCATCCATCAATTATAGATCATTTGGTAAACTTGCAGCC
                      ____________________________________________________________
consensus             GCAGTAAGCTAGCTAGCTAGCTCATCCATCAATTATAGATCATTTGGTAAACTTGCAGCC
 
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rJMFF014I17+                                      CAATATAATGTGGTAATGTTCAGGATGATATT
rJMSF040F10+          ATTACTGACTGGATGGCTGTGAAAAGGGCAATATAATGTGGTAATGTTCAGGATGATATT
                      ____________________________________________________________
consensus             ATTACTGACTGGATGGCTGTGAAAAGGGCAATATAATGTGGTAATGTTCAGGATGATATT
 
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rJMFF014I17+          GAAAAGGTCAATGATTTGAACCCTGAGGTCTGGTTGTGAGTACATGTTTAGCAGGTGCAT
rJMSF040F10+          GAAAAGGTCAATGATTTGAACCCTGAGGTCTGGTTGTGAGTACATGTTTAGCAGGTGCAT
                      ____________________________________________________________
consensus             GAAAAGGTCAATGATTTGAACCCTGAGGTCTGGTTGTGAGTACATGTTTAGCAGGTGCAT
 
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rJMFF034C20+                   CCGTATTTAGTGGTTGGATAGCAGATGGGGTTTGGTCGGCGCAGAGCATTT
rJMFF014I17+          TTGTTG                                                      
rJMSF040F10+          TTGTTGGCTCCGTATTTAGTGGTTGGATAGCAGATGGGG-TTGGTCGGCGCAGAGCATTT
                      ____________________________________________________________
consensus             TTGTTGGCTCCGTATTTAGTGGTTGGATAGCAGATGGGGTTTGGTCGGCGCAGAGCATTT
 
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rJMFF034C20+          CAACTGTTNGCTCTACCTTATGCTCTTGGATTATGCCAGAATCAGGCTGCTGCATTTTGG
rJMSF040F10+          CAACTGTTTGCTCTACCTTATGCTCTTGGATTATGCCAGAATCAGGCTGCTGCATTTTGG
                      ____________________________________________________________
consensus             CAACTGTTTGCTCTACCTTATGCTCTTGGATTATGCCAGAATCAGGCTGCTGCATTTTGG
 
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rJMFF034C20+          AAATGTATAAACATCGCGGAAGCTATGATGAAGCTGATGNCCCTGGTGCCTTAGCTGCAG
rJMSF040F10+          AAATGTATAAACATCGCGGAAGCTATGATGAAGCTGATGACCCTGGTGCCTTAGCTGCAG
                      ____________________________________________________________
consensus             AAATGTATAAACATCGCGGAAGCTATGATGAAGCTGATGACCCTGGTGCCTTAGCTGCAG
 
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rJMFF034C20+          TTGGTTGTTTGNGTGCCATAAGCACAATCATTGAGTCAGTGAGTCGGCTTCCACATCTTT
rJMSF040F10+          TTGGTTGTTTGCGTGCCATAAGCACAATCATTGAGTCAGTGAGTCGGCTTCCACATCTTT
                      ____________________________________________________________
consensus             TTGGTTGTTTGCGTGCCATAAGCACAATCATTGAGTCAGTGAGTCGGCTTCCACATCTTT
 
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rJMFF034C20+          TTGAACAGATTGAGCCAACACTTTTCCTTATCATGCGTAGGATGCTTACNTCTGACGGAC
rJMSF040F10+          TTGAACAGATTGAGCCAACACTTTTCCTTATCATGCGTAGGATGCTTACGTCTGACGGAC
                      ____________________________________________________________
consensus             TTGAACAGATTGAGCCAACACTTTTCCTTATCATGCGTAGGATGCTTACGTCTGACGGAC
 
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rJMFF034C20+          AAGATGTCTATGAAGAGGTTNTGGAGATTGTTTNTTATATGACATTNTACTCGCCAAAAA
rJMSF005N24+           AGATGTCTATGAAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAA
rJMSF040F10+          AAGATGTCTATGAAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAA
                      ____________________________________________________________
consensus             AAGATGTCTATGAAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAA
 
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rJMFF034C20+          TATCAATGAACATGTGGAGTCTNTGGCCATTAATGATGGAGGCCCTTGCAGACTGGACTA
rJMSF005N24+          TATCAATGAACATGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGACTA
rJMSF040F10+          TATCAATGAACATGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGACTA
                      ____________________________________________________________
consensus             TATCAATGAACATGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGACTA
 
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rJMFF034C20+          TTGATTATTTCCCAAACATATTGGTTCCATNGGNCAANTATATATCGAGGAGCNATGAAC
rJMSF005N24+          TTGATTATTTCCCAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAAC
rJMSF040F10+          TTGATTATTTCCCAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAAC
rJMSF041H16+                                                           GAGCACTGAAC
JMSF041H16-                                                            GAGCACTGAAC
                      ____________________________________________________________
consensus             TTGATTATTTCCCAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAAC
 
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rJMFF034C20+          ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCNTTTGGAACATGTATGAGGAGC
rJMSF005N24+          ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCCTTTGGAACATGTATGAGGAGC
rJMSF040F10+          ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCCTTTGGAACATGTATGAGGAGC
rJMSF041H16+          ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCCTTTGGAACATGTATGAGGAGC
JMSF041H16-           ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCCTTTGGAACATGTATGAGGAGC
                      ____________________________________________________________
consensus             ATTTCCTTACTTGCCAGGAACCAGACTACCAGCAAAGCCTTTGGAACATGTATGAGGAGC
 
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rJMFF034C20+          ANTGAACATTTCNTTAGGCGAGCTCGTTTCTGCTANTAGTTCTTTTCCCAATGCTCAAGA
rJMSF005N24+          ACTGAACATTTCCTTAGGCGAGCTCGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
rJMSF040F10+          ACTGAACATTTCCTTAGGCGAGCTCGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
rJMSF041H16+          ACTGAACATTTCCTTAGGCGAGCTCGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
rJMSF050D10+                             GAGCTTGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
JMSF041H16-           ACTGAACATTTCCTTAGGCGAGCTCGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
JMSF050D10-                              GAGCTTGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
                      ____________________________________________________________
consensus             ACTGAACATTTCCTTAGGCGAGCTCGTTTCTGCTATTAGTTCTTTT-CCAATGCTCAAGA
 
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rJMFF034C20+          AAATATATTTTTNGGCAGGTTTACCTCTTGTAGACAAAATTCATAT              
rJMSF005N24+          AAATATATTTTTTGGCAGGTTTACCTCTTGTAGACAAAATTC                  
rJMSF040F10+          AAATATATTTTTTGGCAGGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
rJMSF041H16+          AAATATATTTTTTGGCAGGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
rJMSF050D10+          AAATATATTTTTTGGCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
JMSF041H16-           AAATATATTTTTTGGCAGGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
JMSF050D10-           AAATATATTTTTTGGCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
                      ____________________________________________________________
consensus             AAATATATTTTTTGGCAGGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATT
 
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rJMSF040F10+          ATTGTATTAAAG                                                
rJMSF041H16+          ATTGTATTAAAGTAT                                             
rJMSF050D10+          ATTGTATTAAAGTA                                              
JMSF041H16-           ATTGTATTAAAGTATGAGGATTTTAAATATTATTGTGTTTTGATGATAGTAAAAAAAAAA
JMSF050D10-           ATTGTATTAAAGTATGAGGATTTTAAATATTATTGTGTTTTGATGATAGTAAAAAAAAAA
                      ____________________________________________________________
consensus             ATTGTATTAAAGTATGAGGATTTTAAATATTATTGTGTTTTGATGATAGTAAAAAAAAAA