Contig 008085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN015I11Sequence594008085 (2)ref|XP_009785953.1|1e-41PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like
JMSF050A11Sequence668008085 (2)ref|XP_009785953.1|6e-33PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like695011000 (18)ref|XP_011092558.1|8e-96PREDICTED: 40S ribosomal protein S16-like [Sesamum indicum]

Alignment

This contig is upended


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JMFN015I11-                                  GAGAACTAGTCTCAGXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus                                    GAGAACTAGTCTCAGNNNNNNNNNNNNNNNNNNNNNN
 
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JMFN015I11-           XXXXAAAATAAAAGTTGGATTACATTTCCGTGCAGTTTAATTCTTCCCGCAAAAAACACC
                      ____________________________________________________________
consensus             NNNNAAAATAAAAGTTGGATTACATTTCCGTGCAGTTTAATTCTTCCCGCAAAAAACACC
 
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JMFN015I11-           AGATTAGGACTGAGCAGTCTACGTAATTGATTATCGTCCGAGAAAGTGAAACAACTACGC
                      ____________________________________________________________
consensus             AGATTAGGACTGAGCAGTCTACGTAATTGATTATCGTCCGAGAAAGTGAAACAACTACGC
 
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JMFN015I11-           GAAACAAAACAGCATCTCAACACAGCTAATGCTTATAACACGCAATACGAGAATTACCTA
                      ____________________________________________________________
consensus             GAAACAAAACAGCATCTCAACACAGCTAATGCTTATAACACGCAATACGAGAATTACCTA
 
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JMFN015I11-           AACTAGAAGCAGTAGCAAACGAGTTGCTGTGGCAGTTTACGAGTCCTCCTTTGTGCTGGA
                      ____________________________________________________________
consensus             AACTAGAAGCAGTAGCAAACGAGTTGCTGTGGCAGTTTACGAGTCCTCCTTTGTGCTGGA
 
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JMFN015I11-           CACTGTAGCGTCCCGTTTCTCTTGTTGATTTATTTCTTCGACTCCCTCGGAAGGGGCCTG
                      ____________________________________________________________
consensus             CACTGTAGCGTCCCGTTTCTCTTGTTGATTTATTTCTTCGACTCCCTCGGAAGGGGCCTG
 
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JMFN015I11-           AGCTAGAGAATCAGGTTCCTTTTTCAGTTCTGTTTCGAATTCCTTTGCTGCCTGTTGGAA
JMSF050A11+                                            TTCAAACTCTTTTGCTGCCTGTTGGAA
                      ____________________________________________________________
consensus             AGCTAGAGAATCAGGTTCCTTTTTCAGTTCTGTTTCGAATTCTTTTGCTGCCTGTTGGAA
 
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JMFN015I11-           GCCCTTAAAAGTCTTGCCAATACTGCGGCCAACTTCGGGAAGCTTCTTAGGGCCGAAGAC
JMSF050A11+           GCTCTTGAGGGTCTTGCCAAGACCGCGGCCGATTTCGGGCAACTGCTTAGGGCCGAAGAT
                      ____________________________________________________________
consensus             GCTCTTGAGGGTCTTGCCAATACTGCGGCCGATTTCGGGCAGCTTCTTAGGGCCGAAGAT
 
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JMFN015I11-           GAGGGCGGCGACACCAGCAATGACCACCAGCTCCGGCACCCCAAGCCCGAACAAGCAGTT
JMSF050A11+           AAGGGCGGTGACACCGGCAATGACCACCAGNTCCGGCACCCCAAGCCCGAATAAGCAGTT
                      ____________________________________________________________
consensus             GAGGGCGGTGACACCGGCAATGACCACCAGCTCCGGCACCCCAAGCCCGAATAAGCAGTT
 
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JMFN015I11-           GCAAGAAAACCGCTTT                                            
JMSF050A11+           GCAATAAAGACGCTTTCTACCATTGCTCCTAACATTACAAGTTCTCAGACCCAAACTCCG
                      ____________________________________________________________
consensus             GCAATAAAGCCGCTTTCTACCATTGCTCCTAACATTACAAGTTCTCAGACCCAAACTCCG
 
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JMSF050A11+           TTTGAGCCCGCCCGGGTTGCTGCTGAAGAACAATGAGCTAGAGGAAGAAAAAGCGGCCAC
                      ____________________________________________________________
consensus             TTTGAGCCCGCCCGGGTTGCTGCTGAAGAACAATGAGCTAGAGGAAGAAAAAGCGGCCAC
 
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JMSF050A11+           TGAAGAAGTGGGCTTTGGTGCGAATGAGAGCGACACAGCGGACGCTATGGCCGCCATTTC
                      ____________________________________________________________
consensus             TGAAGAAGTGGGCTTTGGTGCGAATGAGAGCGACACAGCGGACGCTATGGCCGCCATTTC
 
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JMSF050A11+           CAAATATCTATTCCCCGGAGAAGAAAGATCTGATAGAGATTTTGGGGTTTTTGGTGGTTT
                      ____________________________________________________________
consensus             CAAATATCTATTCCCCGGAGAAGAAAGATCTGATAGAGATTTTGGGGTTTTTGGTGGTTT
 
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JMSF050A11+           CAGGTCATTTGGAAGCCTGGAAGTTCCCTTGTAATTCTGTGCACTGTACAGGAGAAAACG
                      ____________________________________________________________
consensus             CAGGTCATTTGGAAGCCTGGAAGTTCCCTTGTAATTCTGTGCACTGTACAGGAGAAAACG
 
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JMSF050A11+           GAAAATCTGAGAGCGGATAAGTACGCAAAACTATGGCTGCTTCTGATTGGCCACCCGCAC
                      ____________________________________________________________
consensus             GAAAATCTGAGAGCGGATAAGTACGCAAAACTATGGCTGCTTCTGATTGGCCACCCGCAC