Contig 008083:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS149B02Sequence618008083 (2)ref|XP_010320275.1|6e-65PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27
JMSF049K11Sequence661008083 (2)ref|XP_010320277.1|2e-68PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27773019451ref|XP_010315042.1|3e-107PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27

Alignment

This contig is upended


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JMSF049K11+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMFS149B02+                              GGTACCCGGTTGGATCCAAGTGAGCTGTGAACTGCCCAGAA
JMSF049K11+           TTCTTGATTACGATTTGTGGGTACCCGGTTGGATCCAAGTGAGCTGTGAACTGCCCAGAA
                      ____________________________________________________________
consensus             TTCTTGATTACGATTTGTGGGTACCCGGTTGGATCCAAGTGAGCTGTGAACTGCCCAGAA
 
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JMFS149B02+           GCTGGAGAGTTTTCATTCTCCCTGGCTGTGAGGAAAACCTCATGGCCTGTCAAGAAATTC
JMSF049K11+           GCTGGAGAGTTTTCATTCTCCCTGGCTGTGAGGAAAACCTCATGGCCTGTCAAGAAATTC
                      ____________________________________________________________
consensus             GCTGGAGAGTTTTCATTCTCCCTGGCTGTGAGGAAAACCTCATGGCCTGTCAAGAAATTC
 
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JMFS149B02+           CACCCAAGCTTCATGCCTGGAAAGAAAGTATCAGTGGGGTAATCAAAGCTCTGCCAGATG
JMSF049K11+           CACCCAAGCTTCATGCCTGGAAAGAAAGTATCAGTGGGGTAATCAAAGCTCTGCCAGATG
                      ____________________________________________________________
consensus             CACCCAAGCTTCATGCCTGGAAAGAAAGTATCAGTGGGGTAATCAAAGCTCTGCCAGATG
 
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JMFS149B02+           AAATTCTCAGGGTTTTCATCCTCAGCATCTCTCACCACAAGATTCCCCGAATCCAAGAGC
JMSF049K11+           AAATTCTCAGGGTTTTCATCCTCAGCATCTCTCACCACAAGATTCCCCGAATCCAAGAGC
                      ____________________________________________________________
consensus             AAATTCTCAGGGTTTTCATCCTCAGCATCTCTCACCACAAGATTCCCCGAATCCAAGAGC
 
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JMFS149B02+           TGAGCGATCGGGTTCTTAGCTGATCTTGATGTGGTGTTCTTGGTGGACCATATAGTCCCA
JMSF049K11+           TGAGCGATCGGGTTCTTAGCTGATCTTGATGTGGTGTTCTTGGTGGACCATATAGTCCCA
                      ____________________________________________________________
consensus             TGAGCGATCGGGTTCTTAGCTGATCTTGATGTGGTGTTCTTGGTGGACCATATAGTCCCA
 
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JMFS149B02+           AGCTTGGCATCAGTGAGGAGTAAGAGGCCAGGCTTGATGATCTTGAAGACAGCTGAAGTT
JMSF049K11+           AGCTTGGCATCAGTGAGGAGTAAGAGGCCAGGCTTGATGATCTTGAAGACAGCTGAAGTT
                      ____________________________________________________________
consensus             AGCTTGGCATCAGTGAGGAGTAAGAGGCCAGGCTTGATGATCTTGAAGACAGCTGAAGTT
 
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JMFS149B02+           GTGTTGGTGAGGGCAGTTTGGGTGTTGGCAATCCATATTAGTGTTGGGACAGGAATTTGT
JMSF049K11+           GTGTTGGTGAGGGCAGTTTGGGTGTTGGCAATCCATATTAGTGTTGGGACAGGAATTTGT
                      ____________________________________________________________
consensus             GTGTTGGTGAGGGCAGTTTGGGTGTTGGCAATCCATATTAGTGTTGGGACAGGAATTTGT
 
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JMFS149B02+           TTGTACCATATAGAGATGTATCGGTTTAAGGAACCTTCAGGGCTGCTGAGAAACCCCATC
JMSF049K11+           TTGTACCATATAGAGATGTATCGGTTTAAGGAACCTTCAGGGCTGCTGAGAAACCCCATC
                      ____________________________________________________________
consensus             TTGTACCATATAGAGATGTATCGGTTTAAGGAACCTTCAGGGCTGCTGAGAAACCCCATC
 
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JMFS149B02+           TCAAAGTGCCCACCAGAAGAAATGATGGTTTCGCCATCTCTGAGGGATTGAGTGGGAGTG
JMSF049K11+           TCAAAGTGCCCACCAGAAGAAATGATGGTTTCGCCATCTCTGAGGGATTGAGTGGGAGTG
                      ____________________________________________________________
consensus             TCAAAGTGCCCACCAGAAGAAATGATGGTTTCGCCATCTCTGAGGGATTGAGTGGGAGTG
 
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JMFS149B02+           ATTGTATCCCTTGCCTGGGAAATAATGTTATGCATGGAGGAAAGCAAGAGGAAGAGTGAG
JMSF049K11+           ATTGTATCCCTTGCCTGGGAAATAATGTTATGCATGGAGGAAAGCAAGAGGAAGAGTGAG
                      ____________________________________________________________
consensus             ATTGTATCCCTTGCCTGGGAAATAATGTTATGCATGGAGGAAAGCAAGAGGAAGAGTGAG
 
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JMFS149B02+           AATAGAAAATTATGCAGGAAACCAATTCTCATTTTCA                       
JMSF049K11+           AATAGAAAATTATGCAGGAAACCAATTCTCATTTTCACACCCTTCTGATCTATTAGTTTC
                      ____________________________________________________________
consensus             AATAGAAAATTATGCAGGAAACCAATTCTCATTTTCACACCCTTCTGATCTATTAGTTTC