Contig 008081:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L16Sequence594008081 (3)ref|XP_009779551.1|1e-88PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana sylvestr799005399 (3)ref|XP_010240996.1|2e-116PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 [Nelumbo nucifera]
JMSF049I01Sequence695008081 (3)ref|XP_009779551.1|3e-99PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana sylvestr713005399 (3)ref|XP_010240996.1|2e-106PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 [Nelumbo nucifera]
JMSF051M01Sequence695008081 (3)ref|XP_009779551.1|1e-102PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana sylvestr670012788 (2)ref|XP_009781764.1|1e-76PREDICTED: uncharacterized protein At1g04910 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF051M01+                                CCAGAGGCCGCAGAGCATTTGAGAGTACATGCTTTGGAA
JMSF049I01+                                                  TTGAGAGTACATGCTTTGGAA
                      ____________________________________________________________
consensus                                  CCAGAGGCCGCAGAGCATTTGAGAGTACATGCTTTGGAA
 
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JMSF051M01+           TGAATCCTTGCATAGCATGGTTTCGTATGGGCTAGTGTAATCTGTGTAGGGATTATTATA
JMFF018L16+                                            AGTGTAATCTGTGTAGGGATTATTATA
JMSF049I01+           TGAATCCTTGCATAGCATGGTTTCGTATGGGCTAGTGTAATCTGTGTAGGGATTATTATA
                      ____________________________________________________________
consensus             TGAATCCTTGCATAGCATGGTTTCGTATGGGCTAGTGTAATCTGTGTAGGGATTATTATA
 
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JMSF051M01+           TGTCCTTTTCTTGAAATATGACCTTTTTTGTAGGCTTGTTAGAATTGGACGTGCCAGAAG
JMFF018L16+           TGTCCTTTTCTTGAAATATGACCTTTTTTGTAGGCTTGTTAGAATTGGACGTGCCAGAAG
JMSF049I01+           TGTCCTTTTCTTGAAATATGACCTTTTTTGTAGGCTTGTTAGAATTGGACGTGCCAGAAG
                      ____________________________________________________________
consensus             TGTCCTTTTCTTGAAATATGACCTTTTTTGTAGGCTTGTTAGAATTGGACGTGCCAGAAG
 
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JMSF051M01+           ACCACCTGGAGTTTTGGCTTCTTCTCTTACAAACAGGAAATACATTGTTTTCCCCTTGTG
JMFF018L16+           ACCACCTGGAGTTTTGGCTTCTTCTCTTACAAACAGGAAATACATTGTTTTCCCCTTGTG
JMSF049I01+           ACCACCTGGAGTTTTGGCTTCTTCTCTTACAAACAGGAAATACATTGTTTTCCCCTTGTG
                      ____________________________________________________________
consensus             ACCACCTGGAGTTTTGGCTTCTTCTCTTACAAACAGGAAATACATTGTTTTCCCCTTGTG
 
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JMSF051M01+           CAAATCCGGCACAAATTGGTTTATCACCGGCATTAACAGGCTGAAAAACAGTGACTTTCT
JMFF018L16+           CAAATCCGGCACAAATTGGTTTATCACCGGCATTAACAGGCTGAAAAACAGTGACTTTCT
JMSF049I01+           CAAATCCGGCACAAATTGGTTTATCACCGGCATTAACAGGCTGAAAAACAGTGACTTTCT
                      ____________________________________________________________
consensus             CAAATCCGGCACAAATTGGTTTATCACCGGCATTAACAGGCTGAAAAACAGTGACTTTCT
 
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JMSF051M01+           TTCTAGTTCTTCTTCGGTCGTAGGTATCAGCTTGTTCTCTCCCTTTGATGTTCCAGAGCT
JMFF018L16+           TTCTAGTTCTTCTTCGGTCGTAGGTATCAGCTTGTTCTCTCCCTTTGATGTTCCAGAGCT
JMSF049I01+           TTCTAGTTCTTCTTCGGTCGTAGGTATCAGCTTGTTCTCTCCCTTTGATGTTCCAGAGCT
                      ____________________________________________________________
consensus             TTCTAGTTCTTCTTCGGTCGTAGGTATCAGCTTGTTCTCTCCCTTTGATGTTCCAGAGCT
 
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JMSF051M01+           TGTCAAGAACTCGGAAATTGGTTGAGAACAAACGATAGATGAAGGTTCACCATTAACGAC
JMFF018L16+           TGTCAAGAACTCGGAAATTGGTTGAGAACAAACGATAGATGAAGGTTCACCATTAACGAC
JMSF049I01+           TGTCAAGAACTCGGAAATTGGTTGAGAACAAACGATAGATGAAGGTTCACCATTAACGAC
                      ____________________________________________________________
consensus             TGTCAAGAACTCGGAAATTGGTTGAGAACAAACGATAGATGAAGGTTCACCATTAACGAC
 
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JMSF051M01+           ACGATCAATATCAGGCTTGACATCCTCGTATGTCACGACGGGGATGAGCTTCTTGAAGGT
JMFF018L16+           ACGATCAATATCAGGCTTGACATCCTCGTATGTCACGACGGGGATGAGCTTCTTGAAGGT
JMSF049I01+           ACGATCAATATCAGGCTTGACATCCTCGTATGTCACGACGGGGATGAGCTTCTTGAAGGT
                      ____________________________________________________________
consensus             ACGATCAATATCAGGCTTGACATCCTCGTATGTCACGACGGGGATGAGCTTCTTGAAGGT
 
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JMSF051M01+           TTCTCTGTCAGTGCTTCCGTTAAGTCCGTGTCGGAGCAAGTATTCGACGCCGGCATTACC
JMFF018L16+           TTCTCTGTCAGTGCTTCCGTTAAGTCCGTGTCGGAGCAAGTATTCGACGCCGGCATTACC
JMSF049I01+           TTCTCTGTCAGTGCTTCCGTTAAGTCCGTGTCGGAGCAAGTATTCGACGCCGGCATTACC
                      ____________________________________________________________
consensus             TTCTCTGTCAGTGCTTCCGTTAAGTCCGTGTCGGAGCAAGTATTCGACGCCGGCATTACC
 
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JMSF051M01+           AGAAAGTATGGCTTTGAGAACCCTTTCTTGAACTTGCCCAGCGTTAGTAGTAACGTCTTC
JMFF018L16+           AGAAAGTATGGCTTTGAGAACCCTTTCTTGAACTTGCCCAGCGTTAGTAGTAACGTCTTC
JMSF049I01+           AGAAAGTATGGCTTTGAGAACCCTTTCTTGAACTTGCCCAGCGTTAGTAGTAACGTCTTC
                      ____________________________________________________________
consensus             AGAAAGTATGGCTTTGAGAACCCTTTCTTGAACTTGCCCAGCGTTAGTAGTAACGTCTTC
 
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JMSF051M01+           TATGAACTGGAGAATCCTGTTGTTGCTTTCCTCCAGATTTCTTTCATCTGACGAACTTTC
JMFF018L16+           TATGAACTGGAGAATCCTGTTGTTGCTTTCCTCCAGATTTCTTTCATCTGACGAACTTTC
JMSF049I01+           TATGAACTGGAGAATCCTGTTGTTGCTTTCCTCCAGATTTCTTTCATCTGACGAACTTTC
                      ____________________________________________________________
consensus             TATGAACTGGAGAATCCTGTTGTTGCTTTCCTCCAGATTTCTTTCATCTGACGAACTTTC
 
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JMSF051M01+           TAAAGCGTCAGTCATGGCATCAAAATGGAAGATTATCAGAATTGAAGATAGAGCT     
JMFF018L16+           TAAAGCGTCAGTCATGGCATCAAAAT                                  
JMSF049I01+           TAAAGCGTCAGTCATGGCATCAAAATGGAAGATTATCAGAATTGAAGATAGAGCTACACC
                      ____________________________________________________________
consensus             TAAAGCGTCAGTCATGGCATCAAAATGGAAGATTATCAGAATTGAAGATAGAGCTACACC