Contig 008074:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048L17+                                   GAATGCAGCNTCTGCAAGTTCTACATATCTATTATA
                      ____________________________________________________________
consensus                                     GAATGCAGCNTCTGCAAGTTCTACATATCTATTATA
 
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JMSF048L17+           TCTCTTCCCGGGAACTGCTTCGTGAAGTTGAACTAGAATCCATAGCGTGTAGAGTTGCCA
                      ____________________________________________________________
consensus             TCTCTTCCCGGGAACTGCTTCGTGAAGTTGAACTAGAATCCATAGCGTGTAGAGTTGCCA
 
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JMSF048L17+           GACATAGGCAATAGTTAACGAAATTATTCCCCAACTCCATCCAAGAAAAGAGAAAGCAAC
                      ____________________________________________________________
consensus             GACATAGGCAATAGTTAACGAAATTATTCCCCAACTCCATCCAAGAAAAGAGAAAGCAAC
 
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JMSF048L17+           TGGCAAGATCAAAGCTTGGAAGCCAACACCAGCATTGAGATTATGGAAAGCAGCATAGTA
                      ____________________________________________________________
consensus             TGGCAAGATCAAAGCTTGGAAGCCAACACCAGCATTGAGATTATGGAAAGCAGCATAGTA
 
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JMSF048L17+           AGCATTCCCATTCCGGGACTCGGTGATGGGAAGCCATGCGTCTTGGGGGTTGAGCTTGGT
                      ____________________________________________________________
consensus             AGCATTCCCATTCCGGGACTCGGTGATGGGAAGCCATGCGTCTTGGGGGTTGAGCTTGGT
 
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JMSF048L17+           GAGATGCCCCACCTCCTCCAAGTAACCCTTCATGTTTATCAGCACCCTTTTCATCGGCGT
                      ____________________________________________________________
consensus             GAGATGCCCCACCTCCTCCAAGTAACCCTTCATGTTTATCAGCACCCTTTTCATCGGCGT
 
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JMSF048L17+           TCCAATCGGGCTCAAGAACCGAGGCGAAATGAACGAAGTCGGCGTCCATGACTTCGCCTC
                      ____________________________________________________________
consensus             TCCAATCGGGCTCAAGAACCGAGGCGAAATGAACGAAGTCGGCGTCCATGACTTCGCCTC
 
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JMSF048L17+           CTTCGACGCCCCCGTCGACGTCTGTGCCCGAGGTGACCTCTGCCCCGACGGCGTCAGTAT
JMSF048J18+                                             GACCTCTGCCCCGACGGCGTCAGTAT
                      ____________________________________________________________
consensus             CTTCGACGCCCCCGTCGACGTCTGTGCCCGAGGTGACCTCTGCCCCGACGGCGTCAGTAT
 
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JMSF048L17+           CTCCGGCGTCGACGCCCGCGGCGTCGCCGGTATCGATATCAGCTCCGTCTCCGGCCTCTC
JMSF048J18+           CTCCGGCGTCGACGCCCGCGGCGTCGCCGGTATCGATATCAGCTCCGTCTCCGGCCTCTC
                      ____________________________________________________________
consensus             CTCCGGCGTCGACGCCCGCGGCGTCGCCGGTATCGATATCAGCTCCGTCTCCGGCCTCTC
 
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JMSF048L17+           CTCCATCACTAGCAGCAGAAATGGATGGCCTTTCTTTCTTTCTTTCACGTACCCTTAGAA
JMSF048J18+           CTCCATCACTAGCAGCAGAAATGGATGGCCTTTCTTTCTTTCTTTCACGTACCCTTAGAA
                      ____________________________________________________________
consensus             CTCCATCACTAGCAGCAGAAATGGATGGCCTTTCTTTCTTTCTTTCACGTACCCTTAGAA
 
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JMSF048L17+           AGCTTTTTGTTTGTTCGTATCTTCAGCTGATGCTTTCTTGTTCCTACGCCACTTTTGTCA
JMSF048J18+           AGCTTTTTGTTTGTTCGTATCTTCAGCTGATGCTTTCTTGTTCCTACGCCACTTTTGTCA
                      ____________________________________________________________
consensus             AGCTTTTTGTTTGTTCGTATCTTCAGCTGATGCTTTCTTGTTCCTACGCCACTTTTGTCA
 
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JMSF048L17+           TCTTTTCTGGGTGAGTCAGAGAATATCGCAGACTGAGATGCACATGCAATCAGTGTGGGA
JMSF048J18+           TCTTTTCTGGGTGAGTCAGAGAATATCGCAGACTGAGATGCACATGCAATCAGTGTGGGA
                      ____________________________________________________________
consensus             TCTTTTCTGGGTGAGTCAGAGAATATCGCAGACTGAGATGCACATGCAATCAGTGTGGGA
 
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JMSF048L17+           CTCTACTCTTACTCTACATATATTCTAT                                
JMSF048J18+           CTCTACTCTTACTCTACATATATTCTATAAGGTGAAAGTGATAGTGTGGGTACGTATATA
                      ____________________________________________________________
consensus             CTCTACTCTTACTCTACATATATTCTATAAGGTGAAAGTGATAGTGTGGGTACGTATATA
 
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JMSF048J18+           TATGAGAGTTCGCAAAAACCAAAACTTTTTCGGTTTTTCCGTTGTGGGGATGTTTGCGGC
                      ____________________________________________________________
consensus             TATGAGAGTTCGCAAAAACCAAAACTTTTTCGGTTTTTCCGTTGTGGGGATGTTTGCGGC
 
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JMSF048J18+           AGCAATCTCGAGGAGGAGCGACGGTGGCGGTGGCGGGACAGGCGTGGCGGCTGTGCGAGA
                      ____________________________________________________________
consensus             AGCAATCTCGAGGAGGAGCGACGGTGGCGGTGGCGGGACAGGCGTGGCGGCTGTGCGAGA
 
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JMSF048J18+           CACATACAATATTCTGCTTTATGGATTTCAAGACACTGCGTGAGTGAGTGAGTGACTGAC
                      ____________________________________________________________
consensus             CACATACAATATTCTGCTTTATGGATTTCAAGACACTGCGTGAGTGAGTGAGTGACTGAC