| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS101G04 | Sequence | 637 | 008062 (5) | ref|XP_006353055.1| | 4e-76 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g4 | |||||
| JMSF047A18 | Sequence | 675 | 008062 (5) | ref|XP_009777497.1| | 8e-59 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g4 | 755 | 008062 (5) | ref|XP_006353055.1| | 5e-91 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g4 |
| JMSF050I11 | Sequence | 725 | 008062 (5) | ref|XP_009777497.1| | 1e-57 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g4 | 712 | 008062 (5) | ref|XP_006353055.1| | 4e-73 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g4 |
This contig is upended
. : . : . : . : . : . :
rJMSF050I11- GGTAAATGAAACAAGTATAAGTGTTGATGGTTGCAGAAGTG
rJMSF047A18- AAGTATAAGTGTTGATGGTTGCAGAAGTG
____________________________________________________________
consensus GGTAAATGAAACAAGTATAAGTGTTGATGGTTGCAGAAGTG
. : . : . : . : . : . :
rJMSF050I11- CCAAAGGCTAAATACACTAGTGTACATGGCTGCACCATTAACATGTTCCTATTTTACAAT
rJMSF047A18- CCAAAGGCTAAATACACTAGTGTACATGGCTGCACCATTAACATGTTCCTATTTTACAAT
____________________________________________________________
consensus CCAAAGGCTAAATACACTAGTGTACATGGCTGCACCATTAACATGTTCCTATTTTACAAT
. : . : . : . : . : . :
rJMSF050I11- TCAATGAATCCTTTTATTTAGACTCGAAGAATACCTTCTGAGAAACAATTACGACTTCTG
rJMSF047A18- TCAATGAATCCTTTTATTTAGACTCGAAGAATACCTTCTGAGAAACAATTACGACTTCTG
____________________________________________________________
consensus TCAATGAATCCTTTTATTTAGACTCGAAGAATACCTTCTGAGAAACAATTACGACTTCTG
. : . : . : . : . : . :
rJMSF050I11- GATTTGGCGTAACCTGGAAATTGTCAGATCGGCGCCGCCAAAGCCATCCATTACTGCATT
rJMSF047A18- GATTTGGCGTAACCTGGAAATTGTCAGATCGGCGCCGCCAAAGCCATCCATTACTGCATT
____________________________________________________________
consensus GATTTGGCGTAACCTGGAAATTGTCAGATCGGCGCCGCCAAAGCCATCCATTACTGCATT
. : . : . : . : . : . :
rJMSF050I11- TGCGCCAGTGAACTCCGCTCTAGCTGTCACGCTGCTCCGAACAACAACGCGAGGCATGCC
rJMSF047A18- TGCGCCAGTGAACTCCGCTCTAGCTGTCACGCTGCTCCGAACAACAACGCGAGGCATGCC
____________________________________________________________
consensus TGCGCCAGTGAACTCCGCTCTAGCTGTCACGCTGCTCCGAACAACAACGCGAGGCATGCC
. : . : . : . : . : . :
rJMSF050I11- AATTCGCTCAGCGGCAGTAACCCCAGATAGACTTCCCGCAACAAGAATGCACTTGTCGAC
rJMSF047A18- AATTCGCTCAGCGGCAGTAACCCCAGATAGACTTCCCGCAACAAGAATGCACTTGTCGAC
____________________________________________________________
consensus AATTCGCTCAGCGGCAGTAACCCCAGATAGACTTCCCGCAACAAGAATGCACTTGTCGAC
. : . : . : . : . : . :
rJMSF050I11- AGGCGTGTCAGCATATTCTGCCCCTGCCCGCAATGCAGCGACAATATTTTCAAAGCTTTC
rJMSF047A18- AGGCGTGTCAGCATATTCTGCCCCTGCCCGCAATGCAGCGACAATATTTTCAAAGCTTTC
____________________________________________________________
consensus AGGCGTGTCAGCATATTCTGCCCCTGCCCGCAATGCAGCGACAATATTTTCAAAGCTTTC
. : . : . : . : . : . :
rJMSF050I11- AGTTGAAGTCGTATCAATATCAACACTCAACTTCAGCATCGAAGCTACCTCCTTTGCAAT
rJMSF047A18- AGTTGAAGTCGTATCAATATCAACACTCAACTTCAGCATCGAAGCTACCTCCTTTGCAAT
____________________________________________________________
consensus AGTTGAAGTCGTATCAATATCAACACTCAACTTCAGCATCGAAGCTACCTCCTTTGCAAT
. : . : . : . : . : . :
rJMSF050I11- TTTCTGCTCCTCGGCAGAAACTGCTTTATTTGCTTCTTTAGCCAATAGCTCACCGAGATC
rJMSF047A18- TTTCTGCTCCTCGGCAGAAACTGCTTTATTTGCTTCTTTAGCCAATAGCTCACCGAGATC
____________________________________________________________
consensus TTTCTGCTCCTCGGCAGAAACTGCTTTATTTGCTTCTTTAGCCAATAGCTCACCGAGATC
. : . : . : . : . : . :
rJMSF050I11- AGAAGACACTCCTTTACCAAGTACAAGTTGGCCATAAAAACTTCGCTTTACCTCTTCATC
rJMSF047A18- AGAAGACACTCCTTTACCAAGTACAAGTTGGCCATAAAAACTTCGCTTTAACTCTTCATC
____________________________________________________________
consensus AGAAGACACTCCTTTACCAAGTACAAGTTGGCCATAAAAACTTCGCTTTACCTCTTCATC
. : . : . : . : . : . :
rJMSF050I11- CCCAATTATCTTCATCTTTGACATTCGATCACTCCCAAGCTTTTCGACGATGGATCTT
rJMSF047A18- CCCAATTATCTTCATCTTTGACATTCGATCACTCCCAAGCTTTTCGACGATGGATCTTGC
JMSF050I11+ CTTGC
JMSF047A18+ CTTGC
____________________________________________________________
consensus CCCAATTATCTTCATCTTTGACATTCGATCACTCCCAAGCTTTTCGACGATGGATCTTGC
. : . : . : . : . : . :
rJMSF047A18- GACCTTATCCCCTCGTTTACTATAGGCCGTTAGCATAACCACAGGTATACTTTCTTCAAG
JMSF050I11+ GACCTTATCCCCTCGTTTACTATAGGCCGTTAGCATAACCACAGGTATACTTTCTTCAAG
JMFS101G04+ GACCTTATCCCCTCGTTTACTATAGGCCGTTAGCATAACCACAGGTATACTTTCTTCAAG
JMSF047A18+ GACCTTATCCCCTCGTTTACTATAGGCCGTTAGCATAACCACAGGTATACTTTCTTCAAG
____________________________________________________________
consensus GACCTTATCCCCTCGTTTACTATAGGCCGTTAGCATAACCACAGGTATACTTTCTTCAAG
. : . : . : . : . : . :
rJMSF047A18- TGCCTCATCAATAAAAGTTTCGA-CCCTGGCCTTAAAGGT-ATGTTTTTGATATAACAAG
JMSF050I11+ TGCCTCATCAATAAAAGTTTCGACCCCTGGCCTTAAAGGTAATGTTTTTGATATAACAAG
JMFS101G04+ TGCCTCATCAATAAAAGTTTCGACCCCTGGCCTTAAAGGTAATGTTTTTGATATAACAAG
JMSF047A18+ TGCCTCATCAATAAAAGTTTCGACCCCTGGCCTTAAAGGTAATGTTTTTGATATAACAAG
____________________________________________________________
consensus TGCCTCATCAATAAAAGTTTCGACCCCTGGCCTTAAAGGTAATGTTTTTGATATAACAAG
. : . : . : . : . : . :
rJMSF047A18- ATCATCCA
JMSF050I11+ ATCATCCAGTGCATTTTTCTTTTCACGGAGAACTCTTTTCAAAAATGCTTCCTTCTCGTT
JMFS101G04+ ATCATCCAGTGCATTTTTCTTTTCACGGAGAACTCTTTTCAAAAATGCTTCCTTCTCGTT
JMSF047A18+ ATCATCCAGTGCATTTTTCTTTTCACGGAGAACTCTTTTCAAAAATGCTTCCTTCTCGTT
____________________________________________________________
consensus ATCATCCAGTGCATTTTTCTTTTCACGGAGAACTCTTTTCAAAAATGCTTCCTTCTCGTT
. : . : . : . : . : . :
JMSF050I11+ TGTAGGTAGCGATGTTGGCCAGCCAATCCTGTTAAAATATAAGATCAACATCCTCTCCTC
JMFS101G04+ TGTAGGTAGCGATGTTGGCCAGCCAATCCTGTTAAAATATAAGATCAACATCCTCTCCTC
JMSF047A18+ TGTAGGTAGCGATGTTGGCCAGCCAATCCTGTTAAAATATAAGATCAACATCCTCTCCTC
____________________________________________________________
consensus TGTAGGTAGCGATGTTGGCCAGCCAATCCTGTTAAAATATAAGATCAACATCCTCTCCTC
. : . : . : . : . : . :
JMSF050I11+ ATCACCAATGCTCTTCTTTACAAGATCCTGATAAACTGGTTGAGTCCAACTTGCACAGTC
JMFS101G04+ ATCACCAATGCTCTTCTTTACAAGATCCTGATAAACTGGTTGAGTCCAACTTGCACAGTC
JMSF047A18+ ATCACCAATGCTCTTCTTTACAAGATCCTGATAAACTGGTTGAGTCCAACTTG-ACAGTC
____________________________________________________________
consensus ATCACCAATGCTCTTCTTTACAAGATCCTGATAAACTGGTTGAGTCCAACTTGCACAGTC
. : . : . : . : . : . :
JMSF050I11+ CAATCCAAGCTTCTGAAATG----ATTGAATGCTTGCCGATTGCCAAAGCGATAGATATC
JMFS101G04+ CAATCCAAGCTTCTGAAATGCTACATTGAATGCTTGCCGATTGCCAAAGCGATAGATATC
JMSF047A18+ CAATCCAAGCTTCTGAAATGCTACATTGAATGCTTGCCGATTGCCAAAGCGATAGATATC
____________________________________________________________
consensus CAATCCAAGCTTCTGAAATGCTACATTGAATGCTTGCCGATTGCCAAAGCGATAGATATC
. : . : . : . : . : . :
JMSF050I11+ CATCAGGACCCCTTCAACTTCAAGAAGAAGAGCAATCTCCTGGCATGGGTTTTCTTGAGT
JMFS101G04+ CATCAGGACCCCTTCAACTTCAAGAAGAAGAGCAATCTCCTGGCATGGGTTTTCTTGAGT
JMSF047A18+ CATCAGGACCCCTTCAACTTCAAGAAGAAGAGCAATCTCCTGGCATGGGTTTTCTTGAGT
____________________________________________________________
consensus CATCAGGACCCCTTCAACTTCAAGAAGAAGAGCAATCTCCTGGCATGGGTTTTCTTGAGT
. : . : . : . : . : . :
JMSF050I11+ GTTACTGGAGAAGGAGGTGGAGGCGCTGAAGCACACCCTGCGGCTCCGAAGAGCGGGAGT
JMFS101G04+ GTTACTGGAGAAGGAGGTGGAGGCGCTGAAGCACACCCTGCGGCTCCGAAGAGCGGGAGT
JMSF047A18+ GTTACTGGAGAAGGAGGTGGAGGCGCTGAAGCACACCCTGCGGCTCCGAAGAGCGGGAGT
____________________________________________________________
consensus GTTACTGGAGAAGGAGGTGGAGGCGCTGAAGCACACCCTGCGGCTCCGAAGAGCGGGAGT
. : . : . : . : . : . :
JMSF050I11+ TCTTGGCGTTATAAGAGGGAGATAAGACAGCGACACAAAATTTTTCCTATGAATTCTGTA
JMFS101G04+ TCTTGGCGTTATAAGAGGGAGATAAGACAGCGACACAAAATTTTTCCTATGAATTCTGTA
JMSF047A18+ TCTTGGCGTTATAAGAGGGAGATAAGACAGCGACACAAAATTTTTCCTATGAATTCTGTA
____________________________________________________________
consensus TCTTGGCGTTATAAGAGGGAGATAAGACAGCGACACAAAATTTTTCCTATGAATTCTGTA
. : . : . : . : . : . :
JMSF050I11+ GAGCTTAGCAGAAGTAGTAGTAGCGGGAAGAGTGTTCAGAATTGCAGAGGAAGCGGCTTC
JMFS101G04+ GAGCTTAGCAGAAGTAGTAGTAGCGGGAAGAGTGTTCAGAATTGCAGAGGAAGCGGCTTC
JMSF047A18+ GAGCTTAGCAGAAGTAGTAGTAGCGGGAAGAGTGTTCAGAATTGCAGAGGAAGCGGCTTC
____________________________________________________________
consensus GAGCTTAGCAGAAGTAGTAGTAGCGGGAAGAGTGTTCAGAATTGCAGAGGAAGCGGCTTC
. : . : . : . : . : . :
JMSF050I11+ CATGGATTCTGCTGCCGGAGATTCTGCTGGAAACTGGATTTTTCTGCGTA
JMFS101G04+ CATGGATTCTGCTGCCGGAGATTCTGCTGGAAACTGG
JMSF047A18+ CATGGATTCTGCTGCCGGAGATTCTGCTGGAAACTGGATTTTTCTGCGTATAAACTCTGC
____________________________________________________________
consensus CATGGATTCTGCTGCCGGAGATTCTGCTGGAAACTGGATTTTTCTGCGTATAAACTCTGC