Contig 008060:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+                           GGCTGTCAAGTAAAACATAACATCCCTCACAAACGGGGCCGGAT
                      ____________________________________________________________
consensus                             GGCTGTCAAGTAAAACATAACATCCCTCACAAACGGGGCCGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           CGACCGGAAAGGGCGCGGCATAAATGGACACGAAGCCCACAACAAAAGCCGAGACAAAAG
                      ____________________________________________________________
consensus             CGACCGGAAAGGGCGCGGCATAAATGGACACGAAGCCCACAACAAAAGCCGAGACAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           TCCCGGCAGAGAGTATCGCCCCAAATCCAGTTCTGGGCTGGCCTCCCTTGACGGCAGCTA
JMSF015I12+            CCCGNCAGAGAGTATCGCCCCAAATCCAGTTCTGGGCTGGCCTCCCTTGACGGCAGCTA
JMSF046M06+                                                  GGCCTCCCTTGACGGCAGCTA
                      ____________________________________________________________
consensus             TCCCGGCAGAGAGTATCGCCCCAAATCCAGTTCTGGGCTGGCCTCCCTTGACGGCAGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           CGGAAGCAAACACATCCGGGGCCCCATTCCCCAGCGCCAAGAGCGTCACCGCACCCATGG
JMSF015I12+           CGGAAGCAAACACATCCGGGGCCCCATTCCCCAGCGCCAAGAGCGTCACCGCACCCATGG
JMSF046M06+           NGGAAGCAAACACATCNGGGGCCCCATTCCCCAGCGCCAAGAGCGTCACCGCACCCATGG
                      ____________________________________________________________
consensus             CGGAAGCAAACACATCCGGGGCCCCATTCCCCAGCGCCAAGAGCGTCACCGCACCCATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           ACGGCGAGAGGCGGAGATGAGCGACGAGCTTGGTGACCACGACGGAGAAGTGGGCCTGGG
JMSF015I12+           ACGGCGAGAGGCGGAGATGAGCGACGAGCTTGGTGACCACGACGGAGAAGTGGGCCTGGG
JMSF046M06+           ACGGCGAGAGGCGGAGATGAGCGACGAGCTNGGTGNCCACGACGGAGAANTGGGCCTGGG
                      ____________________________________________________________
consensus             ACGGCGAGAGGCGGAGATGAGCGACGAGCTTGGTGACCACGACGGAGAAGTGGGCCTGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           CCGTAGTGATGAGGATGTAGAAGTAAAGGAGCACGAAAAGCCCAAGAAACGGGACGGAGA
JMSF015I12+           CCGTAGTGATGAGGATGTAGAAGTAAAGGAGCACGAAAAGCCCAAGAAACGGGACGGAGA
JMSF046M06+           CCGTAGTGATGAGGATGTAGAAGTAAAGGAGCACGAAAAGCCCAAGAAACGGGACGGAGA
                      ____________________________________________________________
consensus             CCGTAGTGATGAGGATGTAGAAGTAAAGGAGCACGAAAAGCCCAAGAAACGGGACGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           GAAATGGGTTTTGGCGGAAGAGGCAGGAGTGGATGGAGAAGTAGTTGAAGAGTCCATCGG
JMSF015I12+           GAAATGGGTTTTGGCGGAAGAGGCAGGAGTGGATGGAGAAGTAGTTGAAGAGTCCATCGG
JMSF046M06+           GAAATGGGTTTNGGCGGAAGAGGCANGAGTGGATGGNGAAGTANTTGAAGAGTCCATCGG
                      ____________________________________________________________
consensus             GAAATGGGTTTTGGCGGAAGAGGCAGGAGTGGATGGAGAAGTAGTTGAAGAGTCCATCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           ATTCATCACTACTGAAGAATCTGCAGGAGGGTTGGGGGGAATTGAGGAGAGACCTGTGAG
JMSF015I12+           ATTCATCACTACTGAAGAATCTGCAGGAGGGTTGGGGGGAATTGAGGAGAGACCTGTGAG
JMSF046M06+           ATTCATCANTACTGAAGAATCTGCAGGAGGGTTGGGGNGAATTGAGGAGAGACCTGTGAG
                      ____________________________________________________________
consensus             ATTCATCACTACTGAAGAATCTGCAGGAGGGTTGGGGGGAATTGAGGAGAGACCTGTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           GAGAGAGTAATATGTGTTTTGATGGATGGTTAGAGGAATATGTAGGCGGCAGGTGGAGGA
JMSF015I12+           GAGAGAGTAATATGTGTTTTGATGGATGGTTAGAGGAATATGTAGGCGGCAGGTGGAGGA
JMSF046M06+           GAGAGAGTAATATGTGTTTTGATGGATGGTTAGAGGAATATNTAGGCGGCAGCTGGAGGA
                      ____________________________________________________________
consensus             GAGAGAGTAATATGTGTTTTGATGGATGGTTAGAGGAATATGTAGGCGGCAGGTGGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           GGAAGAAGGCGACGGTGGCAAGGAGGAATAGTGAGATCGCGGTGGTTGTCAGAGCGGCGG
JMSF015I12+           GGAAGAAGGCGACGGTGGCAAGGAGGAATAGTGAGATCGCGGTGGTTGTCAGAGCGGCGG
JMSF046M06+           GGAAGAAGGCGACGGTGGCAAGGAGGAATAGTGAGATCGCGGTGGTTGTCANAGCGGCGG
                      ____________________________________________________________
consensus             GGAAGAAGGCGACGGTGGCAAGGAGGAATAGTGAGATCGCGGTGGTTGTCAGAGCGGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS148E02+           AGTTGAAGGCCATGCCATACCAAAAAAAGCTCAAACAA                      
JMSF015I12+           AGTTGAAGGCCATGCCATACCAAAAAAAGCTCAAACAA                      
JMSF046M06+           AGTTGANGGCCATGCCATACCAAAAAAAGCTCAAACAATTTACACGCGGGGTCTTCCNCC
                      ____________________________________________________________
consensus             AGTTGAAGGCCATGCCATACCAAAAAAAGCTCAAACAATTTACACGCGGGGTCTTCCNCC