Contig 008059:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008D12Sequence586008059 (4)ref|XP_011075330.1|3e-91PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Sesamum indic
JMFS028F01Sequence652008059 (4)ref|XP_011075330.1|8e-107PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Sesamum indic
JMFS147E10Sequence615008059 (4)ref|XP_011075330.1|1e-97PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Sesamum indic
JMSF046L18Sequence752008059 (4)ref|XP_011075330.1|4e-124PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Sesamum indic786023636ref|XP_010319184.1|2e-38PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X3 [So

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046L18+ TTCCACTAGACCCACATGCATTGATCAAGTTG
                      ____________________________________________________________
consensus TTCCACTAGACCCACATGCATTGATCAAGTTG
 
. : . : . : . : . : . :
JMFS028F01+ CGGAGCATGTCTTCCATGATATTTTTC
JMSF046L18+ TTGTAGGTTGACCTACTTGGGGGAATCGCTGCACGGAGCATGTCTTCCATGATATTTTTC
                      ____________________________________________________________
consensus TTGTAGGTTGACCTACTTGGGGGAATCGCTGCACGGAGCATGTCTTCCATGATATTTTTC
 
. : . : . : . : . : . :
JMFS028F01+ GCCCAACGCCACTGGCCAGCTCGACCATGTGCATTGATGAGAGCATTATAGGTTTCCGCA
JMFS008D12+ TGATGAGAGCATTATAGGTTTCCGCA
JMFS147E10+ GCCAGCTCGACCATGTGCATTGATGAGAGCATTATAGGTTTCCGCA
JMSF046L18+ GCCCAACGCCACTGGCCAGCTCGACCATGTGCATTGATGAGAGCATTATAGGTTTCCGCA
                      ____________________________________________________________
consensus GCCCAACGCCACTGGCCAGCTCGACCATGTGCATTGATGAGAGCATTATAGGTTTCCGCA
 
. : . : . : . : . : . :
JMFS028F01+ TCAGGTTGACACCTCCATTTTTGCATTTCAAAAAACAAGCCACGAGCTTGGTCAATCTGA
JMFS008D12+ TCAGGTTGACACCTCCATTTTTGCATTTCAAAAAACAAGCCACGAGCTTGGTCAATCTGA
JMFS147E10+ TCAGGTTGACACCTCCATTTTTGCATTTCAAAAAACAAGCCACGAGCTTGGTCAATCTGA
JMSF046L18+ TCAGGTTGACACCTCCATTTTTGCATTTCAAAAAACAAGCCACGAGCTTGGTCAATCTGA
                      ____________________________________________________________
consensus TCAGGTTGACACCTCCATTTTTGCATTTCAAAAAACAAGCCACGAGCTTGGTCAATCTGA
 
. : . : . : . : . : . :
JMFS028F01+ TTATGCCTTGCATGCAACCTGATCATCATGTTGTAAATATCACTGCGTGCACAATAGTTC
JMFS008D12+ TTATGCCTTGCATGCAACCTGATCATCATGTTGTAAATATCACTGCGTGCACAATAGTTC
JMFS147E10+ TTATGCCTTGCATGCAACCTGATCATCATGTTGTAAATATCACTGCGTGCACAATAGTTC
JMSF046L18+ TTATGCCTTGCATGCAACCTGATCATCATGTTGTAAATATCACTGCGTGCACAATAGTTC
                      ____________________________________________________________
consensus TTATGCCTTGCATGCAACCTGATCATCATGTTGTAAATATCACTGCGTGCACAATAGTTC
 
. : . : . : . : . : . :
JMFS028F01+ TTTTGGTTCTTCATCCAATTGAAAACATGTACACTGTGCTCTATTGAACCGAGCTGTGTT
JMFS008D12+ TTTTGGTTCTTCATCCAATTGAAAACATGTACACTGTGCTCTATTGAACCGAGCTGTGTT
JMFS147E10+ TTTTGGTTCTTCATCCAATTGAAAACATGTACACTGTGCTCTATTGAACCGAGCTGTGTT
JMSF046L18+ TTTTGGTTCTTCATCCAATTGAAAACATGTACACTGTGCTCTATTGAACCGAGCTGTGTT
                      ____________________________________________________________
consensus TTTTGGTTCTTCATCCAATTGAAAACATGTACACTGTGCTCTATTGAACCGAGCTGTGTT
 
. : . : . : . : . : . :
JMFS028F01+ ATTTCCTTTATAAGAACTGGAAAATTCTTTCGGGCAAATCGACCGGCCCACCGGTTTAAG
JMFS008D12+ ATTTCCTTTATAAGAACTGGAAAATTCTTTCGGGCAAATCGACCGGCCCACCGGTTTAAG
JMFS147E10+ ATTTCCTTTATAAGAACTGGAAAATTCTTTCGGGCAAATCGACCGGCCCACCGGTTTAAG
JMSF046L18+ ATTTCCTTTATAAGAACTGGAAAATTCTTTCGGGCAAATCGACCGGCCCACCGGTTTAAG
                      ____________________________________________________________
consensus ATTTCCTTTATAAGAACTGGAAAATTCTTTCGGGCAAATCGACCGGCCCACCGGTTTAAG
 
. : . : . : . : . : . :
JMFS028F01+ AGGCCATCAATATCTTCCCAGTGATTGAGCTTCATGATATTGGCTACCACCTCAGAGAGT
JMFS008D12+ AGGCCATCAATATCTTCCCAGTGATTGAGCTTCATGATATTGGCTACCACCTCAGAGAGT
JMFS147E10+ AGGCCATCAATATCTTCCCAGTGATTGAGCTTCATGATATTGGCTACCACCTCAGAGAGT
JMSF046L18+ AGGCCATCAATATCTTCCCAGTGATTGAGCTTCATGATATTGGCTACCACCTCAGAGAGT
                      ____________________________________________________________
consensus AGGCCATCAATATCTTCCCAGTGATTGAGCTTCATGATATTGGCTACCACCTCAGAGAGT
 
. : . : . : . : . : . :
JMFS028F01+ GGCCAATCCTTCTGGAACCGGTCTCCGTCGACTCGCAAAAGGTTCCGTTTCGGCAAGTCG
JMFS008D12+ GGCCAATCCTTATGGAACCGGTCTCCGTCGACTCGCAAAAGGTTCCGTTTCGGCAAGTCG
JMFS147E10+ GGCCAATCCTTCTGGAACCGGTCTCCGTCGACTCGCAAAAGGTTCCGTTTCGGCAAGTCG
JMSF046L18+ GGCCAATCCTTCTGGAACCGGTCTCCGTCGACTCGCAAAAGGTTCCGTTTCGGCAAGTCG
                      ____________________________________________________________
consensus GGCCAATCCTTCTGGAACCGGTCTCCGTCGACTCGCAAAAGGTTCCGTTTCGGCAAGTCG
 
. : . : . : . : . : . :
JMFS028F01+ GATTTCCTGAGCCCGTCGATTCGTACGGAAACACTGTGGGTCCCTGTGTCGTAGTCCACT
JMFS008D12+ GATTTCCTGAGCCCGTCGATTCGTACGGAAACACTGTGGGTCCCTGTGTCGTAGTCCACT
JMFS147E10+ GATTTCCTGAGCCCGTCGATTCGTACGGAAACACTGTGGGTCCCTGTGTCGTAGTCCACT
JMSF046L18+ GATTTCCTGAGCCCGTCGATTCGTACGGAAACACTGTGGGTCCCTGTGTCGTAGTCCACT
                      ____________________________________________________________
consensus GATTTCCTGAGCCCGTCGATTCGTACGGAAACACTGTGGGTCCCTGTGTCGTAGTCCACT
 
. : . : . : . : . : . :
JMFS028F01+ GCAGCTTGCTTCTTCTCCACGAATGCGTCCTCATTCTTGGACTTTCTGCAGTAGATTACA
JMFS008D12+ GCAGCTTGCTTCTTCTCCACGAATGCGTCCTCATTCTTGGACTTTCTGCAGTAGATTACA
JMFS147E10+ GCAGCTTGCTTCTTCTCCACGAATGCGTCCTCATTCTTGGACTTTCTGCAGTAGATTACA
JMSF046L18+ GCAGCTTGCTTCTTCTCCACGAATGCGTCCTCATTCTTGGACTTTCTGCAGTAGATTACA
                      ____________________________________________________________
consensus GCAGCTTGCTTCTTCTCCACGAATGCGTCCTCATTCTTGGACTTTCTGCAGTAGATTACA
 
. : . : . : . : . : . :
JMFS028F01+ GACGTTCCAGGTCCGGTTTGAAATGGCGTGAGTTTAGGTTTGCACTGTGATGCCTTTGAG
JMFS008D12+ GACGTTCCAGGTCCGGTTTGAAATGGCGTGAGTTTAGGTTTGCACTGTGATGCCTTTGAG
JMFS147E10+ GACGTTCCAGGTCCGGTTTGAAATGGCGTGAGTTTAGGTTTGCACTGTGATGCCTTTGAG
JMSF046L18+ GACGTTCCAGGTCCGGTTTGAAATGGCGTGAGTTTAGGTTTGCACTGTGATGCCTTTGAG
                      ____________________________________________________________
consensus GACGTTCCAGGTCCGGTTTGAAATGGCGTGAGTTTAGGTTTGCACTGTGATGCCTTTGAG
 
. : . : . : . : . : . :
JMFS028F01+ TCGAGCC
JMFS008D12+ TCGAGCC
JMFS147E10+ TCGAGCC
JMSF046L18+ TCGAGCCTGAAAATGTCTAAGCTGTTGGGGAAGGTAGCCATGGAGATAAAGATAAACCCC
                      ____________________________________________________________
consensus TCGAGCCTGAAAATGTCTAAGCTGTTGGGGAAGGTAGCCATGGAGATAAAGATAAACCCC