Contig 008058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008B21Sequence558008058 (12)gb|AID47022.1|2e-67glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]731006908 (11)gb|AID47022.1|3e-114glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF009M16Sequence491008058 (12)gb|AID47022.1|3e-64glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]701006908 (11)gb|AID47022.1|3e-108glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF023L20Sequence490008058 (12)gb|AID47022.1|1e-64glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF024J10Sequence467008058 (12)gb|AID47022.1|3e-45glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]538006908 (11)gb|AID47022.1|4e-78glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF027J14Sequence598008058 (12)gb|AID47022.1|1e-77glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]704006908 (11)gb|AID47022.1|3e-108glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF029P03Sequence492008058 (12)gb|AID47022.1|3e-65glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]360006908 (11)gb|AID47022.1|4e-09glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF037P08Sequence523008058 (12)gb|AID47022.1|2e-59glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]589006908 (11)gb|AID47022.1|7e-72glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF045C01Sequence622008058 (12)gb|AID47022.1|1e-80glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]560006908 (11)gb|AID47022.1|5e-67glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF017O22Sequence293008058 (12)gb|AID47022.1|5e-29glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]719006908 (11)gb|AID47022.1|1e-116glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF025H07Sequence681008058 (12)gb|AID47022.1|2e-89glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]763006908 (11)gb|AID47022.1|4e-117glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF031F11Sequence647008058 (12)gb|AID47022.1|3e-82glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]749006908 (11)gb|AID47022.1|3e-113glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF046L06Sequence643008058 (12)gb|AID47022.1|1e-71glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]832006908 (11)gb|AID47022.1|4e-142glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]

Alignment

This contig is upended


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JMSF031F11+                                                         GGCACCAGGGGGAA
                      ____________________________________________________________
consensus                                                           GGCACCAGGGGGAA
 
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JMSF031F11+           GACCCACATCTCTACAGATTTCACCCAACTCCAAACAGGTAATAGAAGCTAATTCAGATG
JMSF025H07+                                           AAACAGGTAATAGAAGCTAATTCAGATG
                      ____________________________________________________________
consensus             GACCCACATCTCTACAGATTTCACCCAACTCCAAACAGGTAATAGAAGCTAATTCAGATG
 
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JMSF031F11+           GCTTAAGTATTGCTGCACA-CCTGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
JMSF025H07+           GCTTAAGTATTGCTGCACACCCAGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
JMFF045C01+                                           GCAGGAGCAACTTTCCAGGTAGCCATCA
JMFF027J14+                                                                   ATCA
                      ____________________________________________________________
consensus             GCTTAAGTATTGCTGCACACCCTGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
 
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JMSF031F11+           ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF023L20+                                                          TCTTTAAGAACAT
JMFF024J10+                                                        GTTCTTTAAGAACAT
JMFF029P03+                                                        GTTCTTTAAGAACAT
JMFF009M16+                                                         TTCTTTAAGAACAT
JMSF025H07+           ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF045C01+           ACAGAGGATATTCCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTNTAAGAACAT
JMFF027J14+           ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF008B21+                                               CCCCAAGTGGTTCTTTAAGAACAT
JMSF046L06+                            GGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
                      ____________________________________________________________
consensus             ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
 
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JMSF031F11+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF023L20+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF024J10+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF029P03+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF009M16+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMSF025H07+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF037P08+                     TTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF045C01+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF027J14+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF008B21+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMSF046L06+           ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
                      ____________________________________________________________
consensus             ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
 
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JMSF031F11+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF023L20+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF024J10+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF029P03+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF009M16+           CAGCAAGGCCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMSF025H07+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF037P08+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF045C01+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF027J14+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF008B21+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMSF046L06+           CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
                      ____________________________________________________________
consensus             CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
 
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JMSF031F11+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF023L20+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF024J10+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAG-TTCCTCTCCT
JMFF029P03+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF009M16+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMSF025H07+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF037P08+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF045C01+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF027J14+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF008B21+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMSF046L06+           CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
                      ____________________________________________________________
consensus             CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
 
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JMSF031F11+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF023L20+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF024J10+           TAACCTTAGAAGCAATTGCACGCAAATACTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF029P03+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF009M16+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF025H07+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF017O22+                 TAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF037P08+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF045C01+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF027J14+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF008B21+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF046L06+           TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
                      ____________________________________________________________
consensus             TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
 
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JMSF031F11+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF023L20+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF024J10+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF029P03+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF009M16+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF025H07+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF017O22+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF037P08+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF045C01+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF027J14+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF008B21+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF046L06+           ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
                      ____________________________________________________________
consensus             ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
 
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JMSF031F11+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF023L20+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF024J10+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF029P03+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF009M16+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF025H07+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF017O22+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF037P08+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF045C01+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF027J14+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF008B21+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF046L06+           CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
                      ____________________________________________________________
consensus             CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
 
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JMSF031F11+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF023L20+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF024J10+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF029P03+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF009M16+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF025H07+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF017O22+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF037P08+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF045C01+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF027J14+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF008B21+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF046L06+           TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
                      ____________________________________________________________
consensus             TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
 
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JMSF031F11+           TCCTATCCGCCATGATTTCCAAAAGTGGACAAT                           
JMFF023L20+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACGGAAACT   
JMFF024J10+           TCCTATCCGCCATGATTTCCAAAAGTGGACAAT                           
JMFF029P03+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACGGAAACT   
JMFF009M16+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACT   
JMSF025H07+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMSF017O22+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAA     
JMFF037P08+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF045C01+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF027J14+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF008B21+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMSF046L06+           TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
                      ____________________________________________________________
consensus             TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
 
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JMSF025H07+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA         
JMFF037P08+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA         
JMFF045C01+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA         
JMFF027J14+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA         
JMFF008B21+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA         
JMSF046L06+           AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCATGGGTAGTC
                      ____________________________________________________________
consensus             AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCATGGGTAGTC
 
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JMSF046L06+           TCTCGCTACCGGCAAGACCAAATTTATGGTGATAGGCATAGGCTGATAGGTAGCCAACTC
                      ____________________________________________________________
consensus             TCTCGCTACCGGCAAGACCAAATTTATGGTGATAGGCATAGGCTGATAGGTAGCCAACTC