Contig 008058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008B21Sequence558008058 (12)gb|AID47022.1|2e-67glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]731006908 (11)gb|AID47022.1|3e-114glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF009M16Sequence491008058 (12)gb|AID47022.1|3e-64glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]701006908 (11)gb|AID47022.1|3e-108glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF023L20Sequence490008058 (12)gb|AID47022.1|1e-64glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF024J10Sequence467008058 (12)gb|AID47022.1|3e-45glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]538006908 (11)gb|AID47022.1|4e-78glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF027J14Sequence598008058 (12)gb|AID47022.1|1e-77glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]704006908 (11)gb|AID47022.1|3e-108glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF029P03Sequence492008058 (12)gb|AID47022.1|3e-65glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]360006908 (11)gb|AID47022.1|4e-09glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF037P08Sequence523008058 (12)gb|AID47022.1|2e-59glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]589006908 (11)gb|AID47022.1|7e-72glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMFF045C01Sequence622008058 (12)gb|AID47022.1|1e-80glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]560006908 (11)gb|AID47022.1|5e-67glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF017O22Sequence293008058 (12)gb|AID47022.1|5e-29glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]719006908 (11)gb|AID47022.1|1e-116glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF025H07Sequence681008058 (12)gb|AID47022.1|2e-89glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]763006908 (11)gb|AID47022.1|4e-117glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF031F11Sequence647008058 (12)gb|AID47022.1|3e-82glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]749006908 (11)gb|AID47022.1|3e-113glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]
JMSF046L06Sequence643008058 (12)gb|AID47022.1|1e-71glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]832006908 (11)gb|AID47022.1|4e-142glycine betaine aldehyde dehydrogenase, partial [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031F11+ GGCACCAGGGGGAA
                      ____________________________________________________________
consensus GGCACCAGGGGGAA
 
. : . : . : . : . : . :
JMSF031F11+ GACCCACATCTCTACAGATTTCACCCAACTCCAAACAGGTAATAGAAGCTAATTCAGATG
JMSF025H07+ AAACAGGTAATAGAAGCTAATTCAGATG
                      ____________________________________________________________
consensus GACCCACATCTCTACAGATTTCACCCAACTCCAAACAGGTAATAGAAGCTAATTCAGATG
 
. : . : . : . : . : . :
JMSF031F11+ GCTTAAGTATTGCTGCACA-CCTGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
JMSF025H07+ GCTTAAGTATTGCTGCACACCCAGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
JMFF045C01+ GCAGGAGCAACTTTCCAGGTAGCCATCA
JMFF027J14+ ATCA
                      ____________________________________________________________
consensus GCTTAAGTATTGCTGCACACCCTGCTGCAAGTGCAGGAGCAACTTTCCAGGTAGCCATCA
 
. : . : . : . : . : . :
JMSF031F11+ ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF023L20+ TCTTTAAGAACAT
JMFF024J10+ GTTCTTTAAGAACAT
JMFF029P03+ GTTCTTTAAGAACAT
JMFF009M16+ TTCTTTAAGAACAT
JMSF025H07+ ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF045C01+ ACAGAGGATATTCCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTNTAAGAACAT
JMFF027J14+ ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
JMFF008B21+ CCCCAAGTGGTTCTTTAAGAACAT
JMSF046L06+ GGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
                      ____________________________________________________________
consensus ACAGAGGATAATTCCATGGAGTAATCAACCCAACAACCCCAAGTGGTTCTTTAAGAACAT
 
. : . : . : . : . : . :
JMSF031F11+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF023L20+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF024J10+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF029P03+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF009M16+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMSF025H07+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF037P08+ TTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF045C01+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF027J14+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMFF008B21+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
JMSF046L06+ ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
                      ____________________________________________________________
consensus ACGACTTAAATTGGTCAAGATGAAGAGGAATAGGAGTCTTCTGTTTAGAATCCAAAGCTT
 
. : . : . : . : . : . :
JMSF031F11+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF023L20+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF024J10+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF029P03+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF009M16+ CAGCAAGGCCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMSF025H07+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF037P08+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF045C01+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF027J14+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMFF008B21+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
JMSF046L06+ CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
                      ____________________________________________________________
consensus CAGCAAGGTCTGCATAGTACTCAAAAGCTGCTGCAACATCATCCATATCTGCATCGGCTT
 
. : . : . : . : . : . :
JMSF031F11+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF023L20+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF024J10+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAG-TTCCTCTCCT
JMFF029P03+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF009M16+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMSF025H07+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF037P08+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF045C01+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF027J14+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMFF008B21+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
JMSF046L06+ CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
                      ____________________________________________________________
consensus CTGCCCATGGCTTTCCAGAATCAAAGGTTTCCAGTGTTCCAAGTTCAAGTTTCCTCTCCT
 
. : . : . : . : . : . :
JMSF031F11+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF023L20+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF024J10+ TAACCTTAGAAGCAATTGCACGCAAATACTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF029P03+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF009M16+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF025H07+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF017O22+ TAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF037P08+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF045C01+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF027J14+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMFF008B21+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
JMSF046L06+ TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
                      ____________________________________________________________
consensus TAACCTTAGAAGCAATTGCACGCAAATATTTTGCCCGCTGTGCCCCTGTCTTTGATCCCC
 
. : . : . : . : . : . :
JMSF031F11+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF023L20+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF024J10+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF029P03+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF009M16+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF025H07+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF017O22+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF037P08+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF045C01+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF027J14+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMFF008B21+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
JMSF046L06+ ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
                      ____________________________________________________________
consensus ACTCTCCGGCAAGAGCTCTCCGAGCGGCTTCGACCGCTACATCCACATCATCCGCAGTAG
 
. : . : . : . : . : . :
JMSF031F11+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF023L20+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF024J10+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF029P03+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF009M16+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF025H07+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF017O22+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF037P08+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF045C01+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF027J14+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMFF008B21+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
JMSF046L06+ CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
                      ____________________________________________________________
consensus CTGCCGGAATATCCCCTATAGTTTCTTCGGTAGCGGGGTTGATGATCGGAAGACGATTCT
 
. : . : . : . : . : . :
JMSF031F11+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF023L20+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF024J10+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF029P03+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF009M16+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF025H07+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF017O22+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF037P08+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF045C01+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF027J14+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMFF008B21+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
JMSF046L06+ TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
                      ____________________________________________________________
consensus TCTTCACCGGCTCTCTCCATTCGCCGTCGATGAACAGCTGTCGGATCGGTATGGAAATAT
 
. : . : . : . : . : . :
JMSF031F11+ TCCTATCCGCCATGATTTCCAAAAGTGGACAAT
JMFF023L20+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACGGAAACT
JMFF024J10+ TCCTATCCGCCATGATTTCCAAAAGTGGACAAT
JMFF029P03+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACGGAAACT
JMFF009M16+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACT
JMSF025H07+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMSF017O22+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAA
JMFF037P08+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF045C01+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF027J14+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMFF008B21+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
JMSF046L06+ TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
                      ____________________________________________________________
consensus TCCTATCCGCCATGATTTCCAAAAGTGGACAATGATTGACTCCGAAGTACTGAAACTGTG
 
. : . : . : . : . : . :
JMSF025H07+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA
JMFF037P08+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA
JMFF045C01+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA
JMFF027J14+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA
JMFF008B21+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCA
JMSF046L06+ AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCATGGGTAGTC
                      ____________________________________________________________
consensus AAAATGTGAAGAGACTTCTGGGCAAAGAAAAAAGTAAAAGTCAAAAGTGCATGGGTAGTC
 
. : . : . : . : . : . :
JMSF046L06+ TCTCGCTACCGGCAAGACCAAATTTATGGTGATAGGCATAGGCTGATAGGTAGCCAACTC
                      ____________________________________________________________
consensus TCTCGCTACCGGCAAGACCAAATTTATGGTGATAGGCATAGGCTGATAGGTAGCCAACTC