Contig 008056:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006B01Sequence306008056 (2)ref|XP_006346088.1|117PREDICTED: uncharacterized protein LOC102596748 [Solanum tuberosum]256014099 (4)
JMSF046I09Sequence637008056 (2)ref|XP_009762108.1|206PREDICTED: uncharacterized protein LOC104214176 [Nicotiana sylvestris]723014099 (4)ref|XP_009348781.1|85.1PREDICTED: uncharacterized protein LOC103940393 [Pyrus x bretschneideri]

Alignment

This contig is upended


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JMSF046I09+                                  CAGCTCCTGAATACACCTCGTCACCGCGCGGCTATCG
                      ____________________________________________________________
consensus                                    CAGCTCCTGAATACACCTCGTCACCGCGCGGCTATCG
 
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JMSF046I09+           TTCCTCTCCCTCTGCAACTGCCTCGACATCTTCCAGAACCTGCAAAGCTTCATCTGAACA
                      ____________________________________________________________
consensus             TTCCTCTCCCTCTGCAACTGCCTCGACATCTTCCAGAACCTGCAAAGCTTCATCTGAACA
 
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JMSF006B01+                                                       GATCCACCACTTCCGG
JMSF046I09+           AGAAAAGCAATGAAAAGTGAAGTGCAGGCGGACACGGCCGACGGGATCCACCACTTCCGG
                      ____________________________________________________________
consensus             AGAAAAGCAATGAAAAGTGAAGTGCAGGCGGACACGGCCGACGGGATCCACCACTTCCGG
 
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JMSF006B01+           CACGCGCCGTCGCCGTCTTCCGAATAGGAAGTGAACAATATGGTGAAGAAAAATCCGTGG
JMSF046I09+           CACGCGCCGTCGCCGTCTTCCGAATAGGAAGTGAACAATATGGTGAAGAAAAATCCGTGG
                      ____________________________________________________________
consensus             CACGCGCCGTCGCCGTCTTCCGAATAGGAAGTGAACAATATGGTGAAGAAAAATCCGTGG
 
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JMSF006B01+           AACGTGAAGAAGAAACAGCAGAGTTGGAAGATCTCGCGTCTGATGAAATCCAGCCTTGTC
JMSF046I09+           AACGTGAAGAAGAAACAGCAGAGTTGGAAGATCTCGCGTCTGATGAAATCCAGCCTTGTC
                      ____________________________________________________________
consensus             AACGTGAAGAAGAAACAGCAGAGTTGGAAGATCTCGCGTCTGATGAAATCCAGCCTTGTC
 
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JMSF006B01+           TCTTTGGCCGCGATTCTGCGGCCGAAGAGCTCCTCCTCTCGTTGCCAAAGCTTGAGAAGT
JMSF046I09+           TCTTTGGCCGCGATTCTGCGGCCGAAGAGCTCCTCCTCTCGTTGCCAAAGCTTGAGAAGT
                      ____________________________________________________________
consensus             TCTTTGGCCGCGATTCTGCGGCCGAAGAGCTCCTCCTCTCGTTGCCAAAGCTTGAGAAGT
 
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JMSF006B01+           AAGAGGTGGCCTGGGCTTCGCGAGATCTCCATTAATGGATGGTGCTGAATTGCAGAAGAG
JMSF046I09+           AAGAGGTGGCCTGGGCTTCGCGAGATCTCCATTAATGGATGGTGCTGAATTGCAGAAGAG
                      ____________________________________________________________
consensus             AAGAGGTGGCCTGGGCTTCGCGAGATCTCCATTAATGGATGGTGCTGAATTGCAGAAGAG
 
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JMSF006B01+           ATGGCGATCTGCTTCTTCTGTTGATGCTCTTCGTCGACTGGGATTTCCAC          
JMSF046I09+           ATGGCGATCTGCTTCTTCTGTTGATGCTCTTCGTCGACTGGGATTTCCACGACGACATGC
                      ____________________________________________________________
consensus             ATGGCGATCTGCTTCTTCTGTTGATGCTCTTCGTCGACTGGGATTTCCACGACGACATGC
 
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JMSF046I09+           GCATCTTTCATTTCTGCCATCTCGTATAGTAAGTAGATGATAACGTTCTTATTGGAAGGA
                      ____________________________________________________________
consensus             GCATCTTTCATTTCTGCCATCTCGTATAGTAAGTAGATGATAACGTTCTTATTGGAAGGA
 
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JMSF046I09+           AGCTGAAAATTTAAAACTAAAACTTCAAAAAATTTAAAACTAAAACTTAAATGGAAGAGC
                      ____________________________________________________________
consensus             AGCTGAAAATTTAAAACTAAAACTTCAAAAAATTTAAAACTAAAACTTAAATGGAAGAGC
 
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JMSF046I09+           AAGTAAAATGGTAAGCGTGAGATATGAGAGAGCTTGTTAGATTTGATTGCTTTGTTGTCC
                      ____________________________________________________________
consensus             AAGTAAAATGGTAAGCGTGAGATATGAGAGAGCTTGTTAGATTTGATTGCTTTGTTGTCC