Contig 008055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M17Sequence514008055 (5)ref|XP_006343041.1|1e-26PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]756005816 (6)gb|AAB41026.1|2e-106NADP-malic enzyme, partial [Flaveria linearis]
JMFF004B16Sequence593008055 (5)ref|XP_006343041.1|1e-57PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]720005816 (6)gb|AAB19243.1|6e-91NADP-malic enzyme, partial [Flaveria trinervia]
JMFS122B04Sequence414008055 (5)ref|XP_006359476.1|2e-12PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]
JMFS124E01Sequence567008055 (5)ref|XP_006343041.1|4e-43PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]
JMSF046G19Sequence674008055 (5)ref|XP_006343041.1|2e-61PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]661005816 (6)gb|AAB19243.1|3e-78NADP-malic enzyme, partial [Flaveria trinervia]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046G19+ AGCTCATGATTGAC
                      ____________________________________________________________
consensus AGCTCATGATTGAC
 
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JMFF004B16+ AGGAAGAAGACCACGTAAGTAGTGGGCATCCCTTTCCTTCTGATTAAAGGC
JMSF046G19+ AACCACGGGAGGAAGAAGACCACGTAAGTAGTGGGCATCCCTTTCCTTNTGATTAAAGGC
                      ____________________________________________________________
consensus AACCACGGGAGGAAGAAGACCACGTAAGTAGTGGGCATCCCTTTCCTTCTGATTAAAGGC
 
. : . : . : . : . : . :
JMFF004B16+ AAGACCTTTATTGTAGTGCGGATCACGCAACAATGTGTATCCACTCGCAACAGAGACAGT
JMFS124E01+ GTAGTGCGGATCACGCAACAATGTGTATCCACTCGCAACAGAGACAGT
JMSF046G19+ AAGACCTTTATTGTAGTGCGGATCACGCAACAATGTGTATCCACTCGCAACAGAGACAGT
                      ____________________________________________________________
consensus AAGACCTTTATTGTAGTGCGGATCACGCAACAATGTGTATCCACTCGCAACAGAGACAGT
 
. : . : . : . : . : . :
JMFF004B16+ CCAAGGGGTAATCACTTGATCCTCGGTGGCAGTATCCTCGCCGTAGAAATCCCCAACTCC
JMFS124E01+ CCAAGGGGTAATCACTTGATCCTCGGTGGCAGTATCCTCGCCGTAGAAATCCCCAACTCC
JMFF001M17+ GTGGCAGTATCCTCGCCGTAGAAATCCCCAACTCC
JMSF046G19+ CCAAGGGGTAATCACTTGATCCTCGGTGGCAGTATCCTCGCCGTAGAAATCCCCAACTCC
                      ____________________________________________________________
consensus CCAAGGGGTAATCACTTGATCCTCGGTGGCAGTATCCTCGCCGTAGAAATCCCCAACTCC
 
. : . : . : . : . : . :
JMFF004B16+ GCCGGCGACGGTGGATTTGGCCTCCTTCTCCACAACGGGAACTGACTCCGTCACCTCCTT
JMFS124E01+ GCCGGCGACGGTGGATTTGGCCTCCTTCTCCACAACGGGAACTGACTCCGTCACCTCCTT
JMFF001M17+ GCCGGCGACGGTGGATTTGGCCTCCTTCTCCACAACGGGAACTGACTCCGTCACCTCCTT
JMFS122B04+ T
JMSF046G19+ GCCGGCGACGGTGGATTTGGCCTCCTTCTCCACAACGGGAACTGACTCCGTCACCTCCTT
                      ____________________________________________________________
consensus GCCGGCGACGGTGGATTTGGCCTCCTTCTCCACAACGGGAACTGACTCCGTCACCTCCTT
 
. : . : . : . : . : . :
JMFF004B16+ CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
JMFS124E01+ CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
JMFF001M17+ CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
JMFS122B04+ CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
JMSF046G19+ CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
                      ____________________________________________________________
consensus CAGAGCACTCTCCATCACGATGCTCGCATTCCGGTCTCCGGGTCTGCCGTTGGAGCTGAC
 
. : . : . : . : . : . :
JMFF004B16+ GGCGGCTACAACCTTCGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
JMFS124E01+ GGCGGCTACAACCTTCGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
JMFF001M17+ GGCGGCTACAACCTTCGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
JMFS122B04+ GGCGGCTACAACCTTGGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
JMSF046G19+ GGCGGCTACAACCTTCGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
                      ____________________________________________________________
consensus GGCGGCTACAACCTTCGGAGCTGAAAACCTCCGCTGCGACTGTGACTGAGTCAAGCATTT
 
. : . : . : . : . : . :
JMFF004B16+ CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
JMFS124E01+ CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
JMFF001M17+ CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
JMFS122B04+ CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
JMSF046G19+ CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
                      ____________________________________________________________
consensus CGAAACCCCAGACAGGGAGTTGTTCATAAAAGCGGTCCCGCTTAAGGAAATCATGTTTAT
 
. : . : . : . : . : . :
JMFF004B16+ CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
JMFS124E01+ CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
JMFF001M17+ CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
JMFS122B04+ CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
JMSF046G19+ CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
                      ____________________________________________________________
consensus CTTTAGCAGAAGACGAAGAAGGCCGAGTGTTTCACCGAGAAATAGAGGAAAAAGAGAAGC
 
. : . : . : . : . : . :
JMFF004B16+ GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATAC--CTCTCT
JMFS124E01+ GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATACCTCTCTCT
JMFF001M17+ GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATACCTCTCTCT
JMFS122B04+ GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATACCTCTCTCT
JMSF046G19+ GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATACCTCTCTCT
                      ____________________________________________________________
consensus GAAGGAAGAAAGGAAAAGAGGGGCTATGCTCCTTTAATGTGTGTGTATATACCTCTCTCT
 
. : . : . : . : . : . :
JMFF004B16+ CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
JMFS124E01+ CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
JMFF001M17+ CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
JMFS122B04+ CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
JMSF046G19+ CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
                      ____________________________________________________________
consensus CTCTCCTCTCTCCTCTCTCTCCTCTCTCCCCTACTCTTTCTCTCTCCCTCTCGCCTACTC
 
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JMFF004B16+ TTCC
JMFS124E01+ TTCCTCTCTCTTTCCTACCGGTCTCCCTTTTAGTACTGC
JMFF001M17+ TTCCTCTCTCTTTCCTACCGGTCTCCCTTTTAGTACTGCTTATGTCTCTGAAC
JMFS122B04+ TTCCTCTCTCTTTCCTACCGGTCTCCCTTTTAGTACTGCTTATGTCTCTGAAC
JMSF046G19+ TTCCTCTCTCTTTCCTACCGGTCTCCCTTTTAGTACTGCTTATGTCTCTGAACTGGCACC
                      ____________________________________________________________
consensus TTCCTCTCTCTTTCCTACCGGTCTCCCTTTTAGTACTGCTTATGTCTCTGAACTGGCACC