Contig 008049:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007O12Sequence628008049 (8)ref|XP_009605553.1|4e-75PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]763008049 (8)ref|XP_009605553.1|3e-104PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]
JMFF016C08Sequence629008049 (8)ref|XP_009605553.1|4e-75PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]761008049 (8)ref|XP_009605553.1|3e-104PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]
JMFF046J18Sequence457008049 (8)ref|XP_006355452.1|4e-39PREDICTED: peroxisome biogenesis protein 19-1-like [Solanum tuberosum]428008049 (8)ref|XP_011070126.1|2e-48PREDICTED: peroxisome biogenesis protein 19-2-like [Sesamum indicum]
JMSF045K17Sequence706008049 (8)ref|XP_009605553.1|2e-71PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]779008049 (8)ref|XP_009605553.1|3e-108PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF046J18-                                                   GGCCAAAAATGTCATTTTC
                      ____________________________________________________________
consensus                                                      GGCCAAAAATGTCATTTTC
 
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rJMFF046J18-          CCATTAAAATATAATAATGATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
rJMSF045K17-                            GATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
                      ____________________________________________________________
consensus             CCATTAAAATATAATAATGATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
 
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rJMFF046J18-          ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
rJMSF045K17-          ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
                      ____________________________________________________________
consensus             ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
 
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rJMFF046J18-          GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
rJMSF045K17-          GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
                      ____________________________________________________________
consensus             GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
 
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rJMFF046J18-          TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
rJMFF007O12-                                                                 ATATC
rJMFF016C08-                                                                 ATATC
rJMSF045K17-          TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
                      ____________________________________________________________
consensus             TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
 
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rJMFF046J18-          ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMFF007O12-          ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMFF016C08-          ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMSF045K17-          ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
                      ____________________________________________________________
consensus             ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
 
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rJMFF046J18-          GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMFF007O12-          GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMFF016C08-          GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMSF045K17-          GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMFF016C08+            GCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMFF007O12+             CTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMSF045K17+                         CATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
                      ____________________________________________________________
consensus             GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
 
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rJMFF046J18-          ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCAT           
rJMFF007O12-          ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
rJMFF016C08-          ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
rJMSF045K17-          ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMFF016C08+           ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMFF007O12+           ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMSF045K17+           ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
                      ____________________________________________________________
consensus             ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
 
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rJMFF007O12-          TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
rJMFF016C08-          TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
rJMSF045K17-          TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMFF016C08+           TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMFF046J18+                                                         AGCTGCTGCATCAT
JMFF007O12+           TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMSF045K17+           TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
                      ____________________________________________________________
consensus             TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
 
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rJMFF007O12-          GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
rJMFF016C08-          GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
rJMSF045K17-          GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF016C08+           GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF046J18+           GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF007O12+           GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMSF045K17+           GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
                      ____________________________________________________________
consensus             GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
 
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rJMFF007O12-          TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
rJMFF016C08-          TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
rJMSF045K17-          TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF016C08+           TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF046J18+           TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF007O12+           TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMSF045K17+           TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
                      ____________________________________________________________
consensus             TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
 
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rJMFF007O12-          TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
rJMFF016C08-          TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
rJMSF045K17-          TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF016C08+           TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF046J18+           TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF007O12+           TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMSF045K17+           TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
                      ____________________________________________________________
consensus             TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
 
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rJMFF007O12-          AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
rJMFF016C08-          AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
rJMSF045K17-          AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF016C08+           AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF046J18+           AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF007O12+           AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMSF045K17+           AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
                      ____________________________________________________________
consensus             AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
 
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rJMFF007O12-          CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCA                       
rJMFF016C08-          CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCA                       
rJMSF045K17-          CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCC     
JMFF016C08+           CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMFF046J18+           CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMFF007O12+           CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMSF045K17+           CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
                      ____________________________________________________________
consensus             CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
 
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JMFF016C08+           TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMFF046J18+           TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMFF007O12+           TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMSF045K17+           TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
                      ____________________________________________________________
consensus             TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
 
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JMFF016C08+           AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMFF046J18+           AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMFF007O12+           AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMSF045K17+           AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
                      ____________________________________________________________
consensus             AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
 
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JMFF016C08+           ATTTTCTCTCAATCGATATGAAG                                     
JMFF046J18+           ATTTTCTCTCAATCGATATGAAG                                     
JMFF007O12+           ATTTTCTCTCAATCGATATGAAG                                     
JMSF045K17+           ATTTTCTCTCAATCGATATGAAGTCTATACAACTCTTTTCCACGGTAAATATCTTTAAAA
                      ____________________________________________________________
consensus             ATTTTCTCTCAATCGATATGAAGTCTATACAACTCTTTTCCACGGTAAATATCTTTAAAA
 
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JMSF045K17+           ATCTAATCTTTTTGGTGTCTTTTAGACTAAGGAATGAATGGACATTGAAATCTTAAAACC
                      ____________________________________________________________
consensus             ATCTAATCTTTTTGGTGTCTTTTAGACTAAGGAATGAATGGACATTGAAATCTTAAAACC