Contig 008046:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030I01Sequence423008046 (4)ref|XP_009611900.1|1e-38PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis]741009719 (3)ref|XP_007157636.1|2e-86hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot
JMFS127G10Sequence614008046 (4)ref|XP_009611900.1|4e-65PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis]
JMSF033K14Sequence693008046 (4)ref|XP_009790286.1|5e-64PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana sylvestris]709009719 (3)ref|XP_007157636.1|3e-83hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot
JMSF045E19Sequence771008046 (4)ref|XP_009611900.1|5e-66PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis]720009719 (3)ref|XP_007157636.1|1e-86hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS127G10+ CCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
JMSF033K14+ TCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
JMSF045E19+ GATGTGAACCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
                      ____________________________________________________________
consensus GATGTGAACCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
 
. : . : . : . : . : . :
JMFS127G10+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
JMSF033K14+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
JMSF045E19+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
                      ____________________________________________________________
consensus AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
 
. : . : . : . : . : . :
JMFS127G10+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
JMFF030I01+ C
JMSF033K14+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
JMSF045E19+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
                      ____________________________________________________________
consensus CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
 
. : . : . : . : . : . :
JMFS127G10+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMFF030I01+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMSF033K14+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMSF045E19+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
                      ____________________________________________________________
consensus GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
 
. : . : . : . : . : . :
JMFS127G10+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMFF030I01+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMSF033K14+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMSF045E19+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
                      ____________________________________________________________
consensus ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
 
. : . : . : . : . : . :
JMFS127G10+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMFF030I01+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMSF033K14+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMSF045E19+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
                      ____________________________________________________________
consensus TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
 
. : . : . : . : . : . :
JMFS127G10+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMFF030I01+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMSF033K14+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMSF045E19+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
                      ____________________________________________________________
consensus CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
 
. : . : . : . : . : . :
JMFS127G10+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
JMFF030I01+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCT
JMSF033K14+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
JMSF045E19+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
                      ____________________________________________________________
consensus CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
 
. : . : . : . : . : . :
JMFS127G10+ CAGACGGAAGAAACAAGATCTGA
JMSF033K14+ CAGACGGAAGAAACAAGATCTGA
JMSF045E19+ CAGACGGAAGAAACAAGATCTGAAGTGAGGAAACAGCAGAAAGCAGAGCAAGTGATGGAA
                      ____________________________________________________________
consensus CAGACGGAAGAAACAAGATCTGAAGTGAGGAAACAGCAGAAAGCAGAGCAAGTGATGGAA
 
. : . : . : . : . : . :
JMSF045E19+ GTGGAATCCTGAATGGTGATTTTCGCACGCAGACTACCCATGTAGTTTTCCCCGTCCGCA
                      ____________________________________________________________
consensus GTGGAATCCTGAATGGTGATTTTCGCACGCAGACTACCCATGTAGTTTTCCCCGTCCGCA
 
. : . : . : . : . : . :
JMSF045E19+ ACGGCCCTCATACAAAGTTGCAAACAGATGCCCTATGAGACGTAATCTTCTGCAGAATGC
                      ____________________________________________________________
consensus ACGGCCCTCATACAAAGTTGCAAACAGATGCCCTATGAGACGTAATCTTCTGCAGAATGC
 
. : . : . : . : . : . :
JMSF045E19+ AGAGAGGCGAAAAGAAAGAATCAGAATACAGCAATGCGTCGATTTCTGCCTCTCGTCTGG
                      ____________________________________________________________
consensus AGAGAGGCGAAAAGAAAGAATCAGAATACAGCAATGCGTCGATTTCTGCCTCTCGTCTGG
 
. : . : . : . : . : . :
JMSF045E19+ CGTTGAGATGCCGTTGCCGCCTTAACCTTTAATAATGCTGTGACTTGTGGCCGACCCCCC
                      ____________________________________________________________
consensus CGTTGAGATGCCGTTGCCGCCTTAACCTTTAATAATGCTGTGACTTGTGGCCGACCCCCC