| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030I01 | Sequence | 423 | 008046 (4) | ref|XP_009611900.1| | 1e-38 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis] | 741 | 009719 (3) | ref|XP_007157636.1| | 2e-86 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
| JMFS127G10 | Sequence | 614 | 008046 (4) | ref|XP_009611900.1| | 4e-65 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis] | |||||
| JMSF033K14 | Sequence | 693 | 008046 (4) | ref|XP_009790286.1| | 5e-64 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana sylvestris] | 709 | 009719 (3) | ref|XP_007157636.1| | 3e-83 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
| JMSF045E19 | Sequence | 771 | 008046 (4) | ref|XP_009611900.1| | 5e-66 | PREDICTED: delta(8)-fatty-acid desaturase-like [Nicotiana tomentosiformis] | 720 | 009719 (3) | ref|XP_007157636.1| | 1e-86 | hypothetical protein PHAVU_002G086300g [Phaseolus vulgaris] gb|ESW29630.1| hypot |
This contig is upended
. : . : . : . : . : . :
JMFS127G10+ CCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
JMSF033K14+ TCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
JMSF045E19+ GATGTGAACCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
____________________________________________________________
consensus GATGTGAACCAAAAAACTCTCAAAACAGAGCACGCCATAAAAACAGGCCAA
. : . : . : . : . : . :
JMFS127G10+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
JMSF033K14+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
JMSF045E19+ AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
____________________________________________________________
consensus AAGCAAGGATGTAATAAAGGTGAAAGAGTAAATTACCCCATGGCCTTTCTTCTCAAACAC
. : . : . : . : . : . :
JMFS127G10+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
JMFF030I01+ C
JMSF033K14+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
JMSF045E19+ CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
____________________________________________________________
consensus CCCAGCTTTGGAAAGCTCAGAACAAAGCCTTCTGTAATCCTTGGACATCTCGGAAACCTC
. : . : . : . : . : . :
JMFS127G10+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMFF030I01+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMSF033K14+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
JMSF045E19+ GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
____________________________________________________________
consensus GTAGTCATTGAGATAGTAGCCTGTAAAGAATCTGTCAAGATATTTCCAGGCAGCTCCGGG
. : . : . : . : . : . :
JMFS127G10+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMFF030I01+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMSF033K14+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
JMSF045E19+ ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
____________________________________________________________
consensus ATGAAATGCAATGAAGGCATCGGTACAATCCTGGCCAGCAAGACTGAGGATTGGAATATC
. : . : . : . : . : . :
JMFS127G10+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMFF030I01+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMSF033K14+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
JMSF045E19+ TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
____________________________________________________________
consensus TCCGCCAGGGTGTTCCTTAATCCATTCCGTCACATCGTACACCTTCCCCTGGATAGAAAT
. : . : . : . : . : . :
JMFS127G10+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMFF030I01+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMSF033K14+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
JMSF045E19+ CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
____________________________________________________________
consensus CCACAGATCTTCTCTGCTGCTGTGCTTCTTCAACTCCTCCGACGAAATGTACTTCTTCTC
. : . : . : . : . : . :
JMFS127G10+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
JMFF030I01+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCT
JMSF033K14+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
JMSF045E19+ CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
____________________________________________________________
consensus CGTGTCGTCCACCATTGTCGACCACCACCACCAACAACAACACCGAATCAACCTTCGCAA
. : . : . : . : . : . :
JMFS127G10+ CAGACGGAAGAAACAAGATCTGA
JMSF033K14+ CAGACGGAAGAAACAAGATCTGA
JMSF045E19+ CAGACGGAAGAAACAAGATCTGAAGTGAGGAAACAGCAGAAAGCAGAGCAAGTGATGGAA
____________________________________________________________
consensus CAGACGGAAGAAACAAGATCTGAAGTGAGGAAACAGCAGAAAGCAGAGCAAGTGATGGAA
. : . : . : . : . : . :
JMSF045E19+ GTGGAATCCTGAATGGTGATTTTCGCACGCAGACTACCCATGTAGTTTTCCCCGTCCGCA
____________________________________________________________
consensus GTGGAATCCTGAATGGTGATTTTCGCACGCAGACTACCCATGTAGTTTTCCCCGTCCGCA
. : . : . : . : . : . :
JMSF045E19+ ACGGCCCTCATACAAAGTTGCAAACAGATGCCCTATGAGACGTAATCTTCTGCAGAATGC
____________________________________________________________
consensus ACGGCCCTCATACAAAGTTGCAAACAGATGCCCTATGAGACGTAATCTTCTGCAGAATGC
. : . : . : . : . : . :
JMSF045E19+ AGAGAGGCGAAAAGAAAGAATCAGAATACAGCAATGCGTCGATTTCTGCCTCTCGTCTGG
____________________________________________________________
consensus AGAGAGGCGAAAAGAAAGAATCAGAATACAGCAATGCGTCGATTTCTGCCTCTCGTCTGG
. : . : . : . : . : . :
JMSF045E19+ CGTTGAGATGCCGTTGCCGCCTTAACCTTTAATAATGCTGTGACTTGTGGCCGACCCCCC
____________________________________________________________
consensus CGTTGAGATGCCGTTGCCGCCTTAACCTTTAATAATGCTGTGACTTGTGGCCGACCCCCC