| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF045A05 | Sequence | 745 | 008044 (3) | ref|XP_010321332.1| | 2e-11 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l | 673 | 002980 (5) | ref|XP_006345819.1| | 189 | PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum] |
| JMSF046C05 | Sequence | 784 | 008044 (3) | ref|XP_010321332.1| | 2e-11 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l | 673 | 002980 (5) | ref|XP_006345819.1| | 189 | PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum] |
| JMSF048A05 | Sequence | 575 | 008044 (3) | ref|XP_010321332.1| | 7e-12 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l | 719 | 002980 (5) | ref|XP_006345819.1| | 246 | PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF046C05+ CCTT
____________________________________________________________
consensus CCTT
. : . : . : . : . : . :
JMSF046C05+ CAGTTTACCAGAATTATGACATGTTATTTTGGCTTAACTCCAAAATTTGATGGGAACAGA
JMSF045A05+ AACTCCAAAATTTGATGGGAACAGA
____________________________________________________________
consensus CAGTTTACCAGAATTATGACATGTTATTTTGGCTTAACTCCAAAATTTGATGGGAACAGA
. : . : . : . : . : . :
JMSF046C05+ TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
JMSF048A05+ CCTCTCAGCCAACCTTTCTTTC
JMSF045A05+ TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
____________________________________________________________
consensus TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
. : . : . : . : . : . :
JMSF046C05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
JMSF048A05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
JMSF045A05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
____________________________________________________________
consensus CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
. : . : . : . : . : . :
JMSF046C05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
JMSF048A05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
JMSF045A05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
____________________________________________________________
consensus CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
. : . : . : . : . : . :
JMSF046C05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
JMSF048A05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
JMSF045A05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
____________________________________________________________
consensus CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
. : . : . : . : . : . :
JMSF046C05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
JMSF048A05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
JMSF045A05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
____________________________________________________________
consensus ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
. : . : . : . : . : . :
JMSF046C05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
JMSF048A05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
JMSF045A05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
____________________________________________________________
consensus AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
. : . : . : . : . : . :
JMSF046C05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
JMSF048A05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
JMSF045A05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
____________________________________________________________
consensus CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
. : . : . : . : . : . :
JMSF046C05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
JMSF048A05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
JMSF045A05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
____________________________________________________________
consensus AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
. : . : . : . : . : . :
JMSF046C05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
JMSF048A05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
JMSF045A05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
____________________________________________________________
consensus CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
. : . : . : . : . : . :
JMSF046C05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
JMSF048A05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
JMSF045A05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
____________________________________________________________
consensus CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
. : . : . : . : . : . :
JMSF046C05+ CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
JMSF048A05+ CTACTACTACTGC
JMSF045A05+ CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
____________________________________________________________
consensus CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
. : . : . : . : . : . :
JMSF046C05+ GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC
JMSF045A05+ GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC
____________________________________________________________
consensus GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC