Contig 008044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045A05Sequence745008044 (3)ref|XP_010321332.1|2e-11PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l673002980 (5)ref|XP_006345819.1|189PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum]
JMSF046C05Sequence784008044 (3)ref|XP_010321332.1|2e-11PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l673002980 (5)ref|XP_006345819.1|189PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum]
JMSF048A05Sequence575008044 (3)ref|XP_010321332.1|7e-12PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum l719002980 (5)ref|XP_006345819.1|246PREDICTED: uncharacterized protein LOC102593451 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046C05+ CCTT
                      ____________________________________________________________
consensus CCTT
 
. : . : . : . : . : . :
JMSF046C05+ CAGTTTACCAGAATTATGACATGTTATTTTGGCTTAACTCCAAAATTTGATGGGAACAGA
JMSF045A05+ AACTCCAAAATTTGATGGGAACAGA
                      ____________________________________________________________
consensus CAGTTTACCAGAATTATGACATGTTATTTTGGCTTAACTCCAAAATTTGATGGGAACAGA
 
. : . : . : . : . : . :
JMSF046C05+ TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
JMSF048A05+ CCTCTCAGCCAACCTTTCTTTC
JMSF045A05+ TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
                      ____________________________________________________________
consensus TGAGAAAACTAATAGTATATCATCAATGGCTTTGTCTACCTCTCAGCCAACCTTTCTTTC
 
. : . : . : . : . : . :
JMSF046C05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
JMSF048A05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
JMSF045A05+ CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
                      ____________________________________________________________
consensus CCAAGAAGGGACTCTTATATTTTTCATGTCCAACTCTTCTATTCCAGTAAAAAGAAAAAC
 
. : . : . : . : . : . :
JMSF046C05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
JMSF048A05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
JMSF045A05+ CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
                      ____________________________________________________________
consensus CAGAGCCTTCACAGTTTCAAGAAACCAGAATTGGGAAAAATCCATCTATTCCAAATCTTT
 
. : . : . : . : . : . :
JMSF046C05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
JMSF048A05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
JMSF045A05+ CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
                      ____________________________________________________________
consensus CAAAGAAGTGTTCCAAGTAGCTTCTAATTTCATTGGAAACATTCATCAAATGATTAGCAG
 
. : . : . : . : . : . :
JMSF046C05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
JMSF048A05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
JMSF045A05+ ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
                      ____________________________________________________________
consensus ACATGATGTATTCTTAGAGCGACGAAGAATGCTTAGGAAAAACCAGCAAAATTGTCAATA
 
. : . : . : . : . : . :
JMSF046C05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
JMSF048A05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
JMSF045A05+ AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
                      ____________________________________________________________
consensus AACTATACATAGCTTACAGCGATATACCAAAAGAATGGGAGAAAAGGGGGAAAGCAAATA
 
. : . : . : . : . : . :
JMSF046C05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
JMSF048A05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
JMSF045A05+ CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
                      ____________________________________________________________
consensus CCGGAAGAAGGCGGGGACGTCCTGATAAAATGGGTCGCGAACAAGGGTGTCCATAACGTC
 
. : . : . : . : . : . :
JMSF046C05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
JMSF048A05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
JMSF045A05+ AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
                      ____________________________________________________________
consensus AAAGAGCAGAATCGGCAGCTTCCTTTGGGCGACAGTCGCCATTGTTGAGGAGGCAGTGCT
 
. : . : . : . : . : . :
JMSF046C05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
JMSF048A05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
JMSF045A05+ CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
                      ____________________________________________________________
consensus CCTGGTAATACGGAGAGCGGTTCTAGCAGACGTTGACTTAAAGATGAAAGGAAAGTTGTG
 
. : . : . : . : . : . :
JMSF046C05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
JMSF048A05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
JMSF045A05+ CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
                      ____________________________________________________________
consensus CGCTTTGAAACCCAGAGATGGGAATGGAATCGGCGAAGAAGGAGGTATGAGTAAAGCCAT
 
. : . : . : . : . : . :
JMSF046C05+ CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
JMSF048A05+ CTACTACTACTGC
JMSF045A05+ CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
                      ____________________________________________________________
consensus CTACTACTACTGCTACTGGTGGATCTTCTTCTGTCGCTTCCCTCAGTAGCTCTGCGTGGA
 
. : . : . : . : . : . :
JMSF046C05+ GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC
JMSF045A05+ GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC
                      ____________________________________________________________
consensus GGGAGGGGCAGTTTGGGAAATAACTGAATTTGACTGCTTTGAATGGAATGGGATTGGGCC