Contig 008040:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF044H18Sequence723008040 (2)ref|XP_009790539.1|3e-93PREDICTED: WAT1-related protein At3g28050-like [Nicotiana sylvestris]767008040 (2)ref|XP_011071065.1|4e-57PREDICTED: WAT1-related protein At3g28050-like isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF044H18-             CTGTGGTTGCATTTAGAGGTACAACAATGAAGCACATATAATAATGCTTTTACCTCC
                      ____________________________________________________________
consensus                CTGTGGTTGCATTTAGAGGTACAACAATGAAGCACATATAATAATGCTTTTACCTCC
 
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rJMSF044H18-          AAGTTCTATACACATTTTTGGTGGAGCAAAAAATGCAATAAACCATGCATATTCAAATAA
                      ____________________________________________________________
consensus             AAGTTCTATACACATTTTTGGTGGAGCAAAAAATGCAATAAACCATGCATATTCAAATAA
 
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rJMSF044H18-          AAGCATACCAATTTTACAAGGTCCAGTGACTTCGGCACTAAATTCCCGTCTCCCCACCTT
                      ____________________________________________________________
consensus             AAGCATACCAATTTTACAAGGTCCAGTGACTTCGGCACTAAATTCCCGTCTCCCCACCTT
 
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rJMSF044H18-          TATTTTCCAAGAGAGGAGCCTTTTCACCGCTGGACTTGATGTTTATCACCAAACTGTCAT
                      ____________________________________________________________
consensus             TATTTTCCAAGAGAGGAGCCTTTTCACCGCTGGACTTGATGTTTATCACCAAACTGTCAT
 
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rJMSF044H18-          TAGTCACCTTCATTTCTTTTGCTTTTCCCCATATCACACAGTAAAATCCAATAACAATTA
                      ____________________________________________________________
consensus             TAGTCACCTTCATTTCTTTTGCTTTTCCCCATATCACACAGTAAAATCCAATAACAATTA
 
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rJMSF044H18-          TAACTGAGCCCACCAAACTTCCGACATAGAAAATATCCCCTAAGAAGACGATGCCCAATG
                      ____________________________________________________________
consensus             TAACTGAGCCCACCAAACTTCCGACATAGAAAATATCCCCTAAGAAGACGATGCCCAATG
 
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rJMSF044H18-          CAGCAGCGATCACAATCCCTAACGGATGGAAAAGAGCAACAAAAACAGGTCCCTTCCTGT
                      ____________________________________________________________
consensus             CAGCAGCGATCACAATCCCTAACGGATGGAAAAGAGCAACAAAAACAGGTCCCTTCCTGT
 
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rJMSF044H18-          GTACGCACCAGACCATTACACTGACTTGGAACGCAGAGCCAAAAACCGCCGAGTAGAACA
                      ____________________________________________________________
consensus             GTACGCACCAGACCATTACACTGACTTGGAACGCAGAGCCAAAAACCGCCGAGTAGAACA
 
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rJMSF044H18-          GCAAGCCACCTCATATCAGGCGTTAGCATCCATGCATTTAAGTCCCTGCCCACAATAAGA
                      ____________________________________________________________
consensus             GCAAGCCACCTCATATCAGGCGTTAGCATCCATGCATTTAAGTCCCTGCCCACAATAAGA
 
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rJMSF044H18-          GAGATGACTGCAGATAGAATGGCCGTAAAGAAGAAGTAAAAGAAGACCACAATAAGCTCT
JMSF044H18+                                                                    TCT
                      ____________________________________________________________
consensus             GAGATGACTGCAGATAGAATGGCCGTAAAGAAGAAGTAAAAGAAGACCACAATAAGCTCT
 
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rJMSF044H18-          GCTGGGAAATTCTTAAGGATGGATGCCTGTACAACTAGAAATGCCGAAGACACCAGACAG
JMSF044H18+           GCTGGGAAATTCTTAAGGATGGATGCCTGTACAACTAGAAATGCCGAAGACACCAGACAG
                      ____________________________________________________________
consensus             GCTGGGAAATTCTTAAGGATGGATGCCTGTACAACTAGAAATGCCGAAGACACCAGACAG
 
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rJMSF044H18-          TCAACTAACAGGAACGCTGCTCCAAGAATCCAGTCTACTTGTGGTAAACGAAGATGGTGA
JMSF044H18+           TCAACTAACAGGAACGCTGCTCCAAGAATCCAGTCTACTTGTGGTAAACGAAGATGGTGA
                      ____________________________________________________________
consensus             TCAACTAACAGGAACGCTGCTCCAAGAATCCAGTCTACTTGTGGTAAACGAAGATGGTGA
 
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rJMSF044H18-          AAGTTGGCTCTTGAAGAGGCAGAGTTTGTGAAA                           
JMSF044H18+           AAGTTGGCTCTTGAAGAGGCAGAGTTTGTGAAAATCTCCGGCCCCTTACAGAGAGTAGCA
                      ____________________________________________________________
consensus             AAGTTGGCTCTTGAAGAGGCAGAGTTTGTGAAAATCTCCGGCCCCTTACAGAGAGTAGCA
 
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JMSF044H18+           ATGAATGCTCCAACAATTGACACAATAGTCCCAATACATTTTGCCATGGTGCTTGAGCTA
                      ____________________________________________________________
consensus             ATGAATGCTCCAACAATTGACACAATAGTCCCAATACATTTTGCCATGGTGCTTGAGCTA
 
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JMSF044H18+           GCAAGATCCAGTTTTTCCATTCTGAAAATGATGGCAAGAAGAAAAGTAAAACCTGGAATG
                      ____________________________________________________________
consensus             GCAAGATCCAGTTTTTCCATTCTGAAAATGATGGCAAGAAGAAAAGTAAAACCTGGAATG
 
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JMSF044H18+           AGGTTGAGCATTGCGGAGGCAAAAGATGATGAAGTATAGTTGATTCCAGTATACCCAGTA
                      ____________________________________________________________
consensus             AGGTTGAGCATTGCGGAGGCAAAAGATGATGAAGTATAGTTGATTCCAGTATACCCAGTA
 
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JMSF044H18+           AGCTGTGCTGAGCATCCAAGAATTCCCAGCAAGAAAAACCAGCAGATGAGAGAGAAGGTG
                      ____________________________________________________________
consensus             AGCTGTGCTGAGCATCCAAGAATTCCCAGCAAGAAAAACCAGCAGATGAGAGAGAAGGTG
 
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JMSF044H18+           AGTGGAGGACGAGTTGACCTTTGGATGAAGAAAGCGGGGAGGAGAAGAAGAGCCGCAAGA
                      ____________________________________________________________
consensus             AGTGGAGGACGAGTTGACCTTTGGATGAAGAAAGCGGGGAGGAGAAGAAGAGCCGCAAGA
 
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JMSF044H18+           GCATTGGAGTAGAAGACGAAGGTGAAATTGGTCATTCCACTAGACATGGCTGCTTTGCCT
                      ____________________________________________________________
consensus             GCATTGGAGTAGAAGACGAAGGTGAAATTGGTCATTCCACTAGACATGGCTGCTTTGCCT
 
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JMSF044H18+           ACGATCATCAACCCCACTTGAGCAAACTGGGCTAAAACCATACCCAGATAAGGCAAAGCT
                      ____________________________________________________________
consensus             ACGATCATCAACCCCACTTGAGCAAACTGGGCTAAAACCATACCCAGATAAGGCAAAGCT
 
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JMSF044H18+           CCCTCCACCTTAGCCGCCATAGCCATATCAAATTTTAGGCATTTCACTGGAATCTCTTAC
                      ____________________________________________________________
consensus             CCCTCCACCTTAGCCGCCATAGCCATATCAAATTTTAGGCATTTCACTGGAATCTCTTAC
 
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JMSF044H18+           GTATATATAAGTGGTGGAAGATTGATTTAGTACAGTATCATTCTGGGAAGCTTTGAGTTC
                      ____________________________________________________________
consensus             GTATATATAAGTGGTGGAAGATTGATTTAGTACAGTATCATTCTGGGAAGCTTTGAGTTC