| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002P22 | Sequence | 411 | 008037 (11) | ref|XP_009626843.1| | 6e-59 | PREDICTED: sorting nexin 1 [Nicotiana tomentosiformis] | 748 | 008037 (11) | ref|XP_009764236.1| | 2e-107 | PREDICTED: sorting nexin 1 [Nicotiana sylvestris] |
| JMFF049D13 | Sequence | 638 | 008037 (11) | ref|XP_006341082.1| | 3e-111 | PREDICTED: sorting nexin 1-like [Solanum tuberosum] | 602 | 008037 (11) | ref|XP_009764236.1| | 2e-79 | PREDICTED: sorting nexin 1 [Nicotiana sylvestris] |
| JMFS008F09 | Sequence | 608 | 008037 (11) | ref|XP_006341082.1| | 3e-97 | PREDICTED: sorting nexin 1-like [Solanum tuberosum] | |||||
| JMSF006H13 | Sequence | 363 | 020977 | 504 | 008037 (11) | ref|XP_009764236.1| | 1e-79 | PREDICTED: sorting nexin 1 [Nicotiana sylvestris] | |||
| JMSF016G19 | Sequence | 244 | 008037 (11) | ref|XP_009626843.1| | 1e-12 | PREDICTED: sorting nexin 1 [Nicotiana tomentosiformis] | |||||
| JMSF044C22 | Sequence | 726 | 008037 (11) | ref|XP_006341082.1| | 6e-123 | PREDICTED: sorting nexin 1-like [Solanum tuberosum] | 778 | 008037 (11) | ref|XP_009764236.1| | 4e-134 | PREDICTED: sorting nexin 1 [Nicotiana sylvestris] |
| JMSF051P16 | Sequence | 712 | 008037 (11) | ref|XP_006341082.1| | 2e-118 | PREDICTED: sorting nexin 1-like [Solanum tuberosum] | 800 | 008037 (11) | ref|XP_009764236.1| | 4e-97 | PREDICTED: sorting nexin 1 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF049D13- GTCCAAAC
rJMSF051P16- GATGTTTAGGCACGTTGATGAAGATATTATTGTACAAAGAATAGTCCAAAC
____________________________________________________________
consensus GATGTTTAGGCACGTTGATGAAGATATTATTGTACAAAGAATAGTCCAAAC
. : . : . : . : . : . :
rJMFF049D13- AAGTAGATTTATGGGACTATTTAAATATTGAATTTCATAAGTAAGAATTTAACAGACTTG
rJMSF051P16- AAGTAGATTTATGGGACTATTTAAATATTGAATTTCATAAGTAAGAATTTAACAGACTTG
rJMFF002P22- TAAGTAAGAATTTAACAGACTTG
rJMSF044C22- ACAGACTTG
____________________________________________________________
consensus AAGTAGATTTATGGGACTATTTAAATATTGAATTTCATAAGTAAGAATTTAACAGACTTG
. : . : . : . : . : . :
rJMFF049D13- AGCAATTGTATTTATTGTTTTGCTCTGCACAAGCAGACTAAAGGCTAGTAGATACAACAC
rJMSF051P16- AGCAATTGTATTTATTGTTTTGCTCTGCACAAGCAGACTAAAGGCTAGTAGATACAACAC
rJMFF002P22- AGCAATTGTATTTATTGTTTTGCTCTGCACAAGCAGACTAAAGGCTAGTAGATACAACAC
rJMSF044C22- AGCAATTGTATTTATTGTTTTGCTCTGCACAAGCAGACTAAAGGCTAGTAGATACAACAC
____________________________________________________________
consensus AGCAATTGTATTTATTGTTTTGCTCTGCACAAGCAGACTAAAGGCTAGTAGATACAACAC
. : . : . : . : . : . :
rJMFF049D13- AGGAGTGGCCGAAACTGGCTACCAAATACCAATATTGGTGTGATTACGAGCAAGCTTCGA
rJMSF051P16- AGGAGTGGCCGAAACTGGCTACCAAATACCAATATTGGTGTGATTACGAGCAAGCTTCGA
rJMFF002P22- AGGAGTGGCCGAAACTGGCTACCAAATACCAATATTGGTGTGATTACGAGCAAGCTTCGA
rJMSF006H13- ATTAAGAGCAAGCCTCGA
rJMSF044C22- AGGAGTGGCCGAAACTGGCTACCAAATACCAATATTGGTGTGATTACGAGCAAGCTTCGA
____________________________________________________________
consensus AGGAGTGGCCGAAACTGGCTACCAAATACCAATATTGGTGTGATTACGAGCAAGCTTCGA
. : . : . : . : . : . :
rJMFF049D13- GCTTGGGAAGAAGCCCTCGCCAGGCTTCTGATATACCATTTGCGAGGCGTGCTTGTCCCT
rJMSF051P16- GCTTGGGAAGAAGCCCTCGCCAGGCTTCTGATATACCATTTGCGAGGCGTGCTTGTCCCT
rJMFF002P22- GCTTGGGAAGAAGCCCTCGCCAGGCTTCTGATATACCATTTGCGAGGCGTGCTTGTCCCT
rJMSF006H13- GTTTGGGAAGAAGGCCTCGCCAGGCTTCTGCAACACTGTTTGCTAGGTGCGCTTGTCCCT
rJMSF044C22- GCTTGGGAAGAAGCCCTCGCCAGGCTTCTGATATACCATTTGCGAGGCGTGCTTGTCCCT
____________________________________________________________
consensus GCTTGGGAAGAAGCCCTCGCCAGGCTTCTGATATACCATTTGCGAGGCGTGCTTGTCCCT
. : . : . : . : . : . :
rJMFF049D13- TTGCAAATTCGTGGAAAGCCAGACCCATTTCCAATGTTTTTTGCTCTTGAAATTGGACAA
rJMSF051P16- TTGCAAATTCGTGGAAAGCCAGACCCATTTCCAATGTTTTTTGCTCTTGAAATTGGACAA
rJMFF002P22- TTGCAAATTCGTGGAAAGCCAGACCCATTTCCAATGTTTTTTGCTCTTGAAATTGGACAA
rJMSF006H13- TTGCAAATTCGTGTANAGCAACACCAATATCCAGTGTTTTTTGCTCTTGGAACTGGACAA
rJMSF044C22- TTGCAAATTCGTGGAAAGCCAGACCCATTTCCAATGTTTTTTGCTCTTGAAATTGGACAA
____________________________________________________________
consensus TTGCAAATTCGTGGAAAGCCAGACCCATTTCCAATGTTTTTTGCTCTTGAAATTGGACAA
. : . : . : . : . : . :
rJMFF049D13- TCTCTTCATTCATCAACCGCACTATTGTTTGAAATCTTTGTGCTGCTTCCTCACCCTCGG
rJMSF051P16- TCTCTTCATTCATCAACCGCACTATTGTTTGAAATCTTTGTGCTGCTTCCTCACCCTCGG
rJMFF002P22- TCTCTTCATTCATCAACCGCACTATTGTTTGAAATCTTTGTGCTGCTTCCTCACCCTCGG
rJMSF006H13- TCTCTTCATTCATCAAACGGGCTATTGTCTTGAATCTTTCACCTGCTTCTTCCCCCTCAA
rJMSF044C22- TCTCTTCATTCATCAACCGCACTATTGTTTGAAATCTTTGTGCTGCTTCCTCACCCTCGG
____________________________________________________________
consensus TCTCTTCATTCATCAACCGCACTATTGTTTGAAATCTTTGTGCTGCTTCCTCACCCTCGG
. : . : . : . : . : . :
rJMFF049D13- CTTTCAGCACTTCATATTCACGCTCAGCCTCAAACAACTTCTCTGATCGTGTTAGCCTTA
rJMSF051P16- CTTTCAGCACTTCATATTCACGCTCAGCCTCAAACAACTTCTCTGATCGTGTTAGCCTTA
rJMFF002P22- CTTTCAGCACTTCATATTCACGCTCAGCCTCAAACAACTTCTCTGATCGTGTTAGCCTTA
rJMSF006H13- CCTTCAACACTTCATATTCACGCTCAGCCTCAGCTAACTTATCAGACCGCATTAGCCTGA
rJMSF044C22- CTTTCAGCACTTCATATTCACGCTCAGCCTCAAACAACTTCTCTGATCGTGTTAGCCTTA
____________________________________________________________
consensus CTTTCAGCACTTCATATTCACGCTCAGCCTCAAACAACTTCTCTGATCGTGTTAGCCTTA
. : . : . : . : . : . :
rJMFF049D13- GTTTGTTTAGATCTATCTCCTTGAATTTAATTGTTTCAGCCAGTTCACACTGCTGCCTGA
rJMSF051P16- GTTTGTTTAGATCTATCTCCTTGAATTTAATTGTTTCAGCCAGTTCACACTGCTGCCTGA
rJMFF002P22- GTTTGTTTAGATCTATCTCCTTGAATTTAATTGTTTCAGCCAGTTCACACTGCTGCCTGA
rJMSF006H13- GTTTGTTTATATCTATCTCCTTGAACTTGATTGTTTCAGCCATTTCACACTGATGTTTGA
rJMSF044C22- GTTTGTTTAGATCTATCTCCTTGAATTTAATTGTTTCAGCCAGTTCACACTGCTGCCTGA
____________________________________________________________
consensus GTTTGTTTAGATCTATCTCCTTGAATTTAATTGTTTCAGCCAGTTCACACTGCTGCCTGA
. : . : . : . : . : . :
rJMFF049D13- AAGCATTTGCTCTCTCTGCTATTGTGGCCTTAATTGACTGTACAGCTCGAACATAATCCT
rJMSF051P16- AAGCATTTGCTCTCTCTGCTATTGTGGCCTTAATTGACTGTACAGCTCGAACATAATCCT
rJMFF002P22- AAGCATTTGCTCTCTCTGCTATTGTGGCCTTAATTAACTGTACAGCTCGAACATAATCCT
rJMSF006H13- AAGCATTTGCTCTTTCTGCCATTGTGGCCTTAATCGACTGCACTGCTCGAACATAATCCT
rJMSF044C22- AAGCATTTGCTCTCTCTGCTATTGTGGCCTTAATTGACTGTACAGCTCGAACATAATCCT
____________________________________________________________
consensus AAGCATTTGCTCTCTCTGCTATTGTGGCCTTAATTGACTGTACAGCTCGAACATAATCCT
. : . : . : . : . : . :
rJMFF049D13- TTAATGGTTCTTCAAAATTCATTAGAAGGTAATGTGC
rJMSF051P16- TTAATGGTTCTTCAAAATTCATTAGAAGGTAATGTGCCTCTTTCTGCAGCTTAATAGATA
rJMFF002P22- TTAATGGTTCTTCAAAATTCATTAGAAGGTAATGTGCCTCTTTCTGCAGCTTAATAGATA
rJMSF006H13- TCAATGGCTCTTCAAAATTCATTANAANGTTATGAGCCTCTTTCTGCAGCTTAAT
rJMSF044C22- TTAATGGTTCTTCAAAATTCATTAGAAGGTAATGTGCCTCTTTCTGCAGCTTAATAGATA
____________________________________________________________
consensus TTAATGGTTCTTCAAAATTCATTAGAAGGTAATGTGCCTCTTTCTGCAGCTTAATAGATA
. : . : . : . : . : . :
rJMSF051P16- TGAGCTCAGATTTTGCCCCAAGTTCAGAAAATGCCTTCCCCAGTGCATTATCTTCAGATG
rJMFF002P22- TGAGCTCAGATTTTGCCCCAAGTTCAGAAAATGCCTTCCCCAGTGCATTATCTTCAGATG
rJMSF044C22- TGAGCTCAGATTTTGCCCCAAGTTCAGAAAATGCCTTCCCCAGTGCATTATCTTCAGATG
____________________________________________________________
consensus TGAGCTCAGATTTTGCCCCAAGTTCAGAAAATGCCTTCCCCAGTGCATTATCTTCAGATG
. : . : . : . : . : . :
rJMSF051P16- TTCCCAGAAGCTTGACTGCCTTCCC-AAGTTTGACAAGGACTCTCCT-AAGTCTCTGTGT
rJMFF002P22- TTCCCAGAAGCTTGACTGCCTTCCCAAAGTTTGACAAGGACTCTCCTAAAGTCTCTGTGT
rJMSF044C22- TTCCCAGAAGCTTGACTGCCTTCCCAAAGTTTGACAAGGACTCTCCT-AAGTCTCTGTGT
JMSF044C22+ TCTCTGTGT
____________________________________________________________
consensus TTCCCAGAAGCTTGACTGCCTTCCCAAAGTTTGACAAGGACTCTCCT-AAGTCTCTGTGT
. : . : . : . : . : . :
rJMSF051P16- CTCTCCACAAGACTATATGCATGCTTCTGAG
rJMFF002P22- CTCTTCACAAGACTATATGCATGCTTCTGAGCTTCAGCTAGATGATCTTCAAGCTCAAAT
rJMSF044C22- CTCTTCACAAGACTATATGCATGCTTCTGAGCTTCAGCTAGATGATCTTCAAGCTCAAAT
JMFF049D13+ TAGATGATCTTCAAGCTCAAAT
JMSF051P16+ GACTATATGCATGCTTCTGAGCTTCAGCTAGATGATCTTCAAGCTCAAAT
JMSF044C22+ CTCTTCACAAGACTATATGCATGCTTCTGAGCTTCAGCTAGATGATCTTCAAGCTCAAAT
____________________________________________________________
consensus CTCTTCACAAGACTATATGCATGCTTCTGAGCTTCAGCTAGATGATCTTCAAGCTCAAAT
. : . : . : . : . : . :
rJMSF044C22- ATGTAGTGCTTCAGCTTCTCATATTCAGGATTCGATTCTTCA
JMFF049D13+ ATGTAGTGCTTCAGCTTCTCATATTCAGGATTCGATTCTTCAACTGGTTNTTCCTTTCCA
JMFS008F09+ ACTGGTTTTTCCTTTCCA
JMSF051P16+ ATGTAGTGCTTCAGCTTCTCATATTCAGGATTCGATTCTTCAACTGGTTTTTCCTTTCCA
JMSF044C22+ ATGTAGTGCTTCAGCTTCTCATATTCAGGATTCGATTCTTCAACTGGTTTTTCCTTTCCA
____________________________________________________________
consensus ATGTAGTGCTTCAGCTTCTCATATTCAGGATTCGATTCTTCAACTGGTTTTTCCTTTCCA
. : . : . : . : . : . :
JMFF049D13+ AGGACAACATCACTCACTTTTGATTGTACATCCCAGAATATTNGAATCAGATCAGCTGGC
JMFS008F09+ AGGACAACATCACTCACTTTTGATTGTACATCCCAGAATATTTGAATCAGATCAGCTGGC
JMSF051P16+ AGGACAACATCACTCACTTTTGATTGTACATCCCAGAATATTTGAATCAGATCAGCTGGC
JMSF044C22+ AGGACAACATCACTCACTTTTGATTGTACATCCCAGAATATTTGAATCAGATCAGCTGGC
____________________________________________________________
consensus AGGACAACATCACTCACTTTTGATTGTACATCCCAGAATATTTGAATCAGATCAGCTGGC
. : . : . : . : . : . :
JMFF049D13+ TTTTTCTTAAAAAGGCCAGTCTCCTGGGACCTTGCTCTATCCATTGTCTGCTCATCTGCC
JMFS008F09+ TTTTTCTTAAAAAGGCCAGTCTCCTGGGACCTTGCTCTATCCATTGTCTGCTCATCTGCC
JMSF051P16+ TTTTTCTTAAAAAGGCCAGTCTCCTGGGACCTTGCTCTATCCATTGTCTGCTCATCTGCC
JMSF044C22+ TTTTTCTTAAAAAGGCCAGTCTCCTGGGACCTTGCTCTATCCATTGTCTGCTCATCTGCC
____________________________________________________________
consensus TTTTTCTTAAAAAGGCCAGTCTCCTGGGACCTTGCTCTATCCATTGTCTGCTCATCTGCC
. : . : . : . : . : . :
JMFF049D13+ TGCAAAAATATTCTCAAATCTTCACTCTGTCTAAGCCCATTATGAGAAGCTACGCGGTTA
JMFS008F09+ TGCAAAAATATTCTCAAATCTTCACTCTGTCTAAGCCCATTATGAGAAGCTACGCGGTTA
JMFF002P22+ TAAGCCCATTATGAGAAGCTACGCGGTTA
JMSF051P16+ TGCAAAAATATTCTCAAATCTTCACTCTGTCTAAGCCCATTATGAGAAGCTACGCGGTTA
JMSF044C22+ TGCAAAAATATTCTCAAATCTTCACTCTGTCTAAGCCCATTATGAGAAGCTACGCGGTTA
____________________________________________________________
consensus TGCAAAAATATTCTCAAATCTTCACTCTGTCTAAGCCCATTATGAGAAGCTACGCGGTTA
. : . : . : . : . : . :
JMFF049D13+ ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
JMFS008F09+ ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
JMFF002P22+ ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
JMSF051P16+ ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
JMSF044C22+ ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
____________________________________________________________
consensus ATGAAAATATTCAGAGCTTGACGCCTCATTTCAATGAATTCAGCACTAAACCTGAATTTC
. : . : . : . : . : . :
JMFF049D13+ TCTACAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
JMFS008F09+ TCTACAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
JMFF002P22+ TCTNCAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
JMSF051P16+ TCTACAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
JMSF044C22+ TCTACAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
____________________________________________________________
consensus TCTACAGTATTCTTCTCTGGAAGAGGAGGAATAAAGATGCCCTTATACTTCTCAAAAAGA
. : . : . : . : . : . :
JMFF049D13+ CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
JMFS008F09+ CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
JMFF002P22+ CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
JMSF016G19+ GCTTGA
JMSF051P16+ CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
JMSF044C22+ CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
____________________________________________________________
consensus CGATCACGCAACCAAACAAAATCACTATATCGTCGAATAACAATCTTTTCTTGTGCTTGA
. : . : . : . : . : . :
JMFF049D13+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
JMFS008F09+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
JMFF002P22+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
JMSF016G19+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
JMSF051P16+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
JMSF044C22+ TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
____________________________________________________________
consensus TACTCAGGTAAATTAGTCTTAGCGATGACTTTGTATGAGATATAAGCTTGGACGCCATTG
. : . : . : . : . : . :
JMFF049D13+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
JMFS008F09+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
JMFF002P22+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
JMSF016G19+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
JMSF051P16+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
JMSF044C22+ CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
____________________________________________________________
consensus CCCATTTTAGCTGGATCAGTGACTGACACTGAAAGATACGGTCCGTTTTGGGAAGAAGAA
. : . : . : . : . : . :
JMFF049D13+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
JMFS008F09+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
JMFF002P22+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
JMSF016G19+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
JMSF051P16+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
JMSF044C22+ GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATC---TGCTGCGTCGCGATCATC
____________________________________________________________
consensus GGAGATCTCGGACTTGGCAATGGCCCGGATCCACTTATCTGCTGCTGCGTCGCGATCATC
. : . : . : . : . : . :
JMFF049D13+ GCTGCACTGCTAATCT
JMFS008F09+ GCTGCACTGCTAATCTGCTATTGCCTGTCGTAGGTTGAAGAAACAAAGAG
JMFF002P22+ GCTGCACTGCTAATCTGC
JMSF016G19+ GCTGCACTGCTAATCTGCTATTGCCTGTCGTAGGTTGAAGAAACAAAGAGCAAAAC
JMSF051P16+ GCTGCACTGCTAATCTGCTATTGCCTGTCGTAGGTTGAAGAAACAAAGAGCAAAAC
JMSF044C22+ GCTGCACTGCTAATCTGCTATTGCCTGTCGTAGGTTGAAGAAACAAAGAGCAAAACTACC
____________________________________________________________
consensus GCTGCACTGCTAATCTGCTATTGCCTGTCGTAGGTTGAAGAAACAAAGAGCAAAACTACC