| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS048C02 | Sequence | 242 | 008032 (6) | ||||||||
| JMFS068F08 | Sequence | 615 | 008032 (6) | ref|XP_009613357.1| | 4e-27 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana tomentosiformis | |||||
| JMFS146A12 | Sequence | 626 | 008032 (6) | ref|XP_009613357.1| | 1e-21 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana tomentosiformis | |||||
| JMSF012P01 | Sequence | 412 | 008032 (6) | 762 | 007065 (3) | ref|XP_009613357.1| | 1e-42 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana tomentosiformis | |||
| JMSF021P19 | Sequence | 650 | 008032 (6) | ref|XP_009613357.1| | 2e-22 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana tomentosiformis | 740 | 007065 (3) | ref|XP_009779024.1| | 1e-80 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana sylvestris] |
| JMSF043E16 | Sequence | 764 | 008032 (6) | ref|XP_009613357.1| | 2e-25 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana tomentosiformis | 744 | 007065 (3) | ref|XP_009779024.1| | 1e-36 | PREDICTED: CCR4-NOT transcription complex subunit 10 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS068F08+ TGCTTCTTANAATTATTAAGTTCTTCAATAAGTCTCTTAGGATTTGAACACCCAT
JMSF021P19+ CTCTTAGGATTTGAACACCCAT
JMFS146A12+ CTCTTAGGATTTGAACACCCAT
JMSF043E16+ ATTATTAAGTTCTTCAATAAGTCTCTTAGGATTTGAACACCCAT
____________________________________________________________
consensus TGCTTCTTANAATTATTAAGTTCTTCAATAAGTCTCTTAGGATTTGAACACCCAT
. : . : . : . : . : . :
JMFS068F08+ CTTGAGAGTTCTCCGCAATGACTATGTTATGAAGAACCTTCGGATCGCCTTCTTTGTTCT
JMSF021P19+ CTTGAGAGTTCTCCGCAATGACTATGTTATGAAGAACCTTCGGATCGCCTTCTTTGTTCT
JMFS146A12+ CTTGAGAGTTCTCCGCAATGACTATGTTATGAAGAACCTTCGGATCGCCTTCTTTGTTCT
JMSF043E16+ CTTGAGAGTTCTCCGCAATGACTATGTTATGAAGAACCTTCGGATCGCCTTCTTTGTTCT
____________________________________________________________
consensus CTTGAGAGTTCTCCGCAATGACTATGTTATGAAGAACCTTCGGATCGCCTTCTTTGTTCT
. : . : . : . : . : . :
JMFS048C02+ TCCCCGACTGGAAAAGCAAAT
JMFS068F08+ GAAAGAGCTGATTCAAAACTCTAATGCAATCCTTAAATTTCCCCGACTGGAAAAGCAAAG
JMSF021P19+ GAAAGAGCTGATTCAAAACTCTAATGCAATCCTTAAATTTCCCCGACTGGAAAAGCAAAG
JMFS146A12+ GAAAGAGCTGATTCAAAACTCTAATGCAATCCTTAAATTTCCCCGACTGGAAAAGCAAAG
JMSF043E16+ GAAAGAGCTGATTCAAAACTCTAATGCAATCCTTAAATTTCCCCGACTGGAAAAGCAAAG
____________________________________________________________
consensus GAAAGAGCTGATTCAAAACTCTAATGCAATCCTTAAATTTCCCCGACTGGAAAAGCAAAG
. : . : . : . : . : . :
JMSF012P01+ CTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
JMFS048C02+ CGGCTTCCTTGGCAAGTCTGTAGGCAACATAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
JMFS068F08+ CGGCCTCCTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
JMSF021P19+ CGGCCTCCTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
JMFS146A12+ CGGCCTCCTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
JMSF043E16+ CGGCCTCCTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
____________________________________________________________
consensus CGGCCTCCTTGGCAAGTCCGGAGGCAACAGAGGGTGCAACCTCGTCTTCCGCAGTTGCCG
. : . : . : . : . : . :
JMSF012P01+ CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
JMFS048C02+ CCACAGTTGGTGACGAGGAAGGGGCTTCTCGATTATTTGACATCGCCATTGAGGAAGAGG
JMFS068F08+ CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
JMSF021P19+ CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
JMFS146A12+ CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
JMSF043E16+ CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
____________________________________________________________
consensus CCACAGCTGGTGACGAGGAAGGGGCTTCTCGATTATTCGACATCGCCATTGAGGAAGAGG
. : . : . : . : . : . :
JMSF012P01+ AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
JMFS048C02+ AACCCGATGAATCCATCCAGCAACAGATGGATACAGCCTCCGGTAGGAAATGAACCGCAA
JMFS068F08+ AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
JMSF021P19+ AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
JMFS146A12+ AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
JMSF043E16+ AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
____________________________________________________________
consensus AACCCGATGAATCCATCCAGCAACAGATCGATACAGCCTCCGGTAGGAAATGAACCGCAA
. : . : . : . : . : . :
JMSF012P01+ CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
JMFS048C02+ CAATCCAAAAACCGTAAGCTTCGCAATGTAAACCCTCACT
JMFS068F08+ CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
JMSF021P19+ CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
JMFS146A12+ CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
JMSF043E16+ CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
____________________________________________________________
consensus CAATCCAAAAACCCTAAGCTTCGCAATGTAAACCCTCACTCTAAAGGCTCAGTTGACGTT
. : . : . : . : . : . :
JMSF012P01+ ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
JMFS068F08+ ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
JMSF021P19+ ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
JMFS146A12+ ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
JMSF043E16+ ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
____________________________________________________________
consensus ATCCGCATCCAAATCTCAATTCGTACAGATCGAGTGAGATTGATACTCAAAACCCTAGTG
. : . : . : . : . : . :
JMSF012P01+ CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
JMFS068F08+ CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
JMSF021P19+ CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
JMFS146A12+ CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
JMSF043E16+ CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
____________________________________________________________
consensus CTTCAACACAACATATACATTCAAACATCTGAAGGCTGAATATGCATATGATACTACATG
. : . : . : . : . : . :
JMSF012P01+ TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAG
JMFS068F08+ TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAGCGAGAGCGAGAGCGAGA
JMSF021P19+ TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAGCGAGAGCGAGAGCGAGA
JMFS146A12+ TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAGCGAGAGCGAGAGCGAGA
JMSF043E16+ TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAGCGAGAGCGAGAGCGAGA
____________________________________________________________
consensus TATGTATCGATTTGGGATGCGCCGATTTGAGAGAGAGAGAGAGCGAGAGCGAGAGCGAGA
. : . : . : . : . : . :
JMFS068F08+ ACGAGAGAGAGAGAGAGTGG
JMSF021P19+ ACGAGAGAGAGAGAGAGTGGGGGGAAAGCGGATAGAGAGAAAATCTAGAGCGAATCAGAG
JMFS146A12+ ACGAGAGAGAGAGAGAGTGGGGGGAAAGCGGATAGAGAGAAAATCTAGAGCGAATCAGAG
JMSF043E16+ ACGAGAGAGAGAGAGAGTGGGGGGAAAGCGGATAGAGAGAAAATCTAGAGCGAATCAGAG
____________________________________________________________
consensus ACGAGAGAGAGAGAGAGTGGGGGGAAAGCGGATAGAGAGAAAATCTAGAGCGAATCAGAG
. : . : . : . : . : . :
JMSF021P19+ TAAAGGGCTAAATGGTTAATTC
JMFS146A12+ TAAA
JMSF043E16+ TAAAGGGCTAAATGGTTAATTCACTGTAAGTTTGGGGGCTCGGTGAGAACACAAATTAGA
____________________________________________________________
consensus TAAAGGGCTAAATGGTTAATTCACTGTAAGTTTGGGGGCTCGGTGAGAACACAAATTAGA
. : . : . : . : . : . :
JMSF043E16+ GAAGAAGACGAGTTTAAAAAGAAATTGATGGGGAATAGGTTTGGGGACCAAAGTCAATTC
____________________________________________________________
consensus GAAGAAGACGAGTTTAAAAAGAAATTGATGGGGAATAGGTTTGGGGACCAAAGTCAATTC