Contig 008030:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033A08Sequence636008030 (2)ref|XP_009592155.1|2e-66PREDICTED: probable inactive patatin-like protein 9 [Nicotiana tomentosiformis]699001418 (2)ref|XP_009592155.1|4e-79PREDICTED: probable inactive patatin-like protein 9 [Nicotiana tomentosiformis]
JMSF042N03Sequence776008030 (2)ref|XP_009592155.1|9e-66PREDICTED: probable inactive patatin-like protein 9 [Nicotiana tomentosiformis]734001418 (2)ref|XP_009592155.1|8e-98PREDICTED: probable inactive patatin-like protein 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF033A08+                TCCTCAAAGCCTCCTTCAACACCTTATCCATACTCTTCCCCGAAAATTTCCGCCG
JMSF042N03+               CTCCTCAAAGCCTCCTTCAACACCTTATCCATACTCTTCCCCGAAAATTTCCGCCG
                      ____________________________________________________________
consensus                 CTCCTCAAAGCCTCCTTCAACACCTTATCCATACTCTTCCCCGAAAATTTCCGCCG
 
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JMSF033A08+           CCTGCCAAAAACGCCGACGTGCTTCTTCTTGAACAGCTCCGGCTGCTTCTCTCTCACGAA
JMSF042N03+           CCTGCCAAAAACGCCGACGTGCTTCTTCTTGAACAGCTCCGGCTGCTTCTCTCTCACGAA
                      ____________________________________________________________
consensus             CCTGCCAAAAACGCCGACGTGCTTCTTCTTGAACAGCTCCGGCTGCTTCTCTCTCACGAA
 
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JMSF033A08+           CGCGAAGGCCTCCTTCGCCGTATACAAAGGACGGCCGTTTCCTCCGTCGGCAGTCAACAT
JMSF042N03+           CGCGAAGGCCTCCTTCGCCGTATACAAAGGACGGCCGTTTCCTCCGTCGGCAGTCAACAT
                      ____________________________________________________________
consensus             CGCGAAGGCCTCCTTCGCCGTATACAAAGGACGGCCGTTTCCTCCGTCGGCAGTCAACAT
 
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JMSF033A08+           TGTGGCGAAGATAGCACCTATTCCAGTACCGGCGATAACATCGAAGAAGTCGGCAATCCG
JMSF042N03+           TGTGGCGAAGATAGCACCTATTCCAGTACCGGCGATAACATCGAAGAAGTCGGCAATCCG
                      ____________________________________________________________
consensus             TGTGGCGAAGATAGCACCTATTCCAGTACCGGCGATAACATCGAAGAAGTCGGCAATCCG
 
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JMSF033A08+           AGCATTAGGATCGCCGGTTTTCGCGCAGATCTGATCCTCTAGATGGATCAAAGCAGCAGC
JMSF042N03+           AGCATTAGGATCGCCGGTTTTCGCGCAGATCTGATCCTCTAGATGGATCAAAGCAGCAGC
                      ____________________________________________________________
consensus             AGCATTAGGATCGCCGGTTTTCGCGCAGATCTGATCCTCTAGATGGATCAAAGCAGCAGC
 
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JMSF033A08+           GCAAACAATGCCGGTAGTTCCTCCGCCGTCGATGCAAAGAACACCCGTTTTCCTTCCTTC
JMSF042N03+           GCAAACAATGCCGGTAGTTCCTCCGCCGTCGATGCAAAGAACACCCGTTTTCCTTCCTTC
                      ____________________________________________________________
consensus             GCAAACAATGCCGGTAGTTCCTCCGCCGTCGATGCAAAGAACACCCGTTTTCCTTCCTTC
 
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JMSF033A08+           GCAGTGGTAAAGCCATTTCTGCTCCAGCTTAGAGAAAATCTCCTGCGTCATCTTACTCAG
JMSF042N03+           GCAGTGGTAAAGCCATTTCTGCTCCAGCTTAGAGAAAATCTCCTGCGTCATCTTACTCAG
                      ____________________________________________________________
consensus             GCAGTGGTAAAGCCATTTCTGCTCCAGCTTAGAGAAAATCTCCTGCGTCATCTTACTCAG
 
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JMSF033A08+           CTCCGACTCCATCATCCCTACCTTCAACACGACTTCAGAGAGAACAAAAAAACAGCAAAA
JMSF042N03+           CTCCGACTCCATCATCCCTACCTTCAACACGACTTCAGAGAGAACAAAAAAACAGCAAAA
                      ____________________________________________________________
consensus             CTCCGACTCCATCATCCCTACCTTCAACACGACTTCAGAGAGAACAAAAAAACAGCAAAA
 
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JMSF033A08+           ACAAAAGACAATCTCAAATCTCAAATCTCAAGGCGAGTGTTACAGTGGGTGTTGTTGAAG
JMSF042N03+           ACAAAAGACAATCTCAAATCTCAAATCTCAAGGCGAGTGTTACAGTGGGTGTTGTTGAAG
                      ____________________________________________________________
consensus             ACAAAAGACAATCTCAAATCTCAAATCTCAAGGCGAGTGTTACAGTGGGTGTTGTTGAAG
 
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JMSF033A08+           GCTATGAACTGCGAGTGTGTATAGAGAGGCATAGAGCATGGACTGGACTACTATAGGGTG
JMSF042N03+           GCTATGAACTGCGAGTGTGTATAGAGAGGCATAGAGCATGGACTGGACTACTATAGGGTG
                      ____________________________________________________________
consensus             GCTATGAACTGCGAGTGTGTATAGAGAGGCATAGAGCATGGACTGGACTACTATAGGGTG
 
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JMSF033A08+           GTGCCGTACTGAAAGAAAATCCGTGAAACATGAAAAGTCC                    
JMSF042N03+           GTGCCGTACTGAAAGAAAATCCGTGAAACATGAAAAGTCCTCACGCTTTGTTTCTGAGAG
                      ____________________________________________________________
consensus             GTGCCGTACTGAAAGAAAATCCGTGAAACATGAAAAGTCCTCACGCTTTGTTTCTGAGAG
 
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JMSF042N03+           GCATTTATGGCTCTTAGTTTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCACAGTAACTGC
                      ____________________________________________________________
consensus             GCATTTATGGCTCTTAGTTTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCACAGTAACTGC
 
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JMSF042N03+           ATTCTATTTCTCTCTCTAACAGTCACACACAGAGTGTGTTGGAGAAGGTACAGAGAGGCC
                      ____________________________________________________________
consensus             ATTCTATTTCTCTCTCTAACAGTCACACACAGAGTGTGTTGGAGAAGGTACAGAGAGGCC