Contig 008029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015F22Sequence577008029 (3)ref|XP_009631909.1|5e-44PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis]613004116 (3)ref|XP_009631909.1|4e-71PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis]
JMFF044J20Sequence647008029 (3)ref|XP_004240685.1|2e-59PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum]555004116 (3)ref|XP_009631909.1|3e-58PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis]
JMSF042J08Sequence756008029 (3)ref|XP_004240685.1|1e-78PREDICTED: aspartic proteinase Asp1 [Solanum lycopersicum]731004116 (3)ref|XP_009631909.1|2e-94PREDICTED: aspartic proteinase Asp1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF042J08+                                   AGTCCAAGTACTCCATCTAAAGGATGGTAAGACTGG
                      ____________________________________________________________
consensus                                     AGTCCAAGTACTCCATCTAAAGGATGGTAAGACTGG
 
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JMSF042J08+           CCAATTTCCTGATCATATCCACATCCAAGAGCTAGATGAGGAGCAATCTGAACTCCATTG
                      ____________________________________________________________
consensus             CCAATTTCCTGATCATATCCACATCCAAGAGCTAGATGAGGAGCAATCTGAACTCCATTG
 
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JMFF044J20+                       GAAAAGACGTCATTAAGTAGGATACCAAGGGATGAACCCCCATCTGCA
JMSF042J08+           GTGAGATTGAGGGAAAAGACGTCATTAAGTAGGATACCAAGGGATGAACCCCCATCTGCA
                      ____________________________________________________________
consensus             GTGAGATTGAGGGAAAAGACGTCATTAAGTAGGATACCAAGGGATGAACCCCCATCTGCA
 
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JMFF044J20+           TACTGAACGTCATAATCACATTGTTCTAGAGTTTCGCATTTCTGATCACCCGAATGCAAT
JMFF015F22+                                 GTTCTAGAGTTTCGCATTTCTGATCACCCGAATGCAAT
JMSF042J08+           TACTGAACGTCATAATCACATTGTTCTAGAGTTTCGCATTTCTGATCACCCGAATGCAAT
                      ____________________________________________________________
consensus             TACTGAACGTCATAATCACATTGTTCTAGAGTTTCGCATTTCTGATCACCCGAATGCAAT
 
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JMFF044J20+           GAGGCACAGAGAGGATCCTTACAACCCACAAGGTCATTATTGGGTTTGTAAGGGGGGTGA
JMFF015F22+           GAGGCACAGAGAGGATCCTTACAACCCACAAGGTCATTATTGGGTTTGTAAGGGGGGTGA
JMSF042J08+           GAGGCACAGAGAGGATCCTTACAACCCACAAGGTCATTATTGGGTTTGTAAGGGGGGTGA
                      ____________________________________________________________
consensus             GAGGCACAGAGAGGATCCTTACAACCCACAAGGTCATTATTGGGTTTGTAAGGGGGGTGA
 
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JMFF044J20+           GGCGCCTTTGTGCAACGGAGACAAGGAGCATCGCACTGAAGCCATGTAAGGTCACTGCCT
JMFF015F22+           GGCGCCTTTGTGCAACGGAGACAAGGAGCATCGCACTGAAGCCATGTAAGGTCACTGCCT
JMSF042J08+           GGCGCCTTTGTGCAACGGAGACAAGGAGCATCGCACTGAAGCCATGTAAGGTCACTGCCT
                      ____________________________________________________________
consensus             GGCGCCTTTGTGCAACGGAGACAAGGAGCATCGCACTGAAGCCATGTAAGGTCACTGCCT
 
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JMFF044J20+           GTGTCGGGATCAAGAAAATACGGCTTTGGAGGCTGCCCTATATTCACTTGAGCAAAATAA
JMFF015F22+           GTGTCGGGATCAAGAAAATACGGCTTTGGAGGCTGCCCTATATTCACTTGAGCAAAATAA
JMSF042J08+           GTGTCGGGATCAAGAAAATACGGCTTTGGAGGCTGCCCTATATTCACTTGAGCAAAATAA
                      ____________________________________________________________
consensus             GTGTCGGGATCAAGAAAATACGGCTTTGGAGGCTGCCCTATATTCACTTGAGCAAAATAA
 
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JMFF044J20+           AAGCCATTGGGATAAACATTGCCGTGCAGTTGTAGGATAATAGAAGAAGCGCGGGCGGGA
JMFF015F22+           AAGCCATTGGGATAAACATTGCCGTGCAGTTGTAGGATAATAGAAGAAGCGCGGGCGGGA
JMSF042J08+           AAGCCATTGGGATAAACATTGCCGTGCAGTTGTAGGATAATAGAAGAAGCGCGGGCGGGA
                      ____________________________________________________________
consensus             AAGCCATTGGGATAAACATTGCCGTGCAGTTGTAGGATAATAGAAGAAGCGCGGGCGGGA
 
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JMFF044J20+           TTGACCGCCGACAGAGAAGAAAAGAGTCGTCCGGAATCGCTTATCGCCGATTTCCACCAT
JMFF015F22+           TTGACCGCCGACAGAGAAGAAAAGAGTCGTCCGGAATCGCTTATCGCCGATTTCCACCAT
JMSF042J08+           TTGACCGCCGACAGAGAAGAAAAGAGTCGTCCGGAATCGCTTATCGCCGATTTCCACCAT
                      ____________________________________________________________
consensus             TTGACCGCCGACAGAGAAGAAAAGAGTCGTCCGGAATCGCTTATCGCCGATTTCCACCAT
 
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JMFF044J20+           TTCTCCGCCGCGGATGACACGATCAACACCCCAAAAATTATCAGAATTGCCAGTTTCATC
JMFF015F22+           TTCTCCGCCGCGGATGACACGATCAACACCCCAAAAATTATCAGAATTGCCAGTTTCATC
JMSF042J08+           TTCTCCGCCGCGGATGACACGATCAACACCCCAAAAATTATCAGAATTGCCAGTTTCATC
                      ____________________________________________________________
consensus             TTCTCCGCCGCGGATGACACGATCAACACCCCAAAAATTATCAGAATTGCCAGTTTCATC
 
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JMFF044J20+           CCCCTCATACCTCTGTCTTAGCAAACACCCAACACTTGAAGAAGAATCAATCAAGATTGG
JMFF015F22+           CCCCTCATACCTCTGTCTTAGCAAACACCCAACACTTGAAGAAGAATCAATCAAGATTGG
JMSF042J08+           CCCCTCATACCTCTGTCTTAGCAAACACCCAACACTTGAAGAAGAATCAATCAAGATTGG
                      ____________________________________________________________
consensus             CCCCTCATACCTCTGTCTTAGCAAACACCCAACACTTGAAGAAGAATCAATCAAGATTGG
 
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JMFF044J20+           TTCTTCTTGAAATGCCCTTCCCCGCAGAACACGTCCGATTATCTTTCCTTCTTTTATCTG
JMFF015F22+           TTCTTCTTGAAATGCCCTTCCCCGCAGAACACGTCCGATTATCTTTCCTTCTTTTATCTG
JMSF042J08+           TTCTTCTTGAAATGCCCTTCCCCGCAGAACACGTCCGATTATCTTTCCTTCTTTTATCTG
                      ____________________________________________________________
consensus             TTCTTCTTGAAATGCCCTTCCCCGCAGAACACGTCCGATTATCTTTCCTTCTTTTATCTG
 
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JMFF044J20+           AAAAGTTGATTGGATTATTGGGAAAGGTCTCAAGATTTTCTTTGCTGATTCCCTCC    
JMFF015F22+           AAAAGTTGATTGGATTATTGGGAAAGGTCTCAAGATTTTCTTTGCTGATTCCCTCC    
JMSF042J08+           AAAAGTTGATTGGATTATTGGGAAAGGTCTCAAGATTTTCTTTGCTGATTCCCTCCATTC
                      ____________________________________________________________
consensus             AAAAGTTGATTGGATTATTGGGAAAGGTCTCAAGATTTTCTTTGCTGATTCCCTCCATTC