Contig 008027:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028J05Sequence596008027 (10)ref|XP_004249869.1|121PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]718008027 (10)ref|XP_009784701.1|149PREDICTED: uncharacterized protein LOC104233095 [Nicotiana sylvestris]
JMSF032E14Sequence640008027 (10)ref|XP_004249869.1|120PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]735008027 (10)ref|XP_009784701.1|149PREDICTED: uncharacterized protein LOC104233095 [Nicotiana sylvestris]
JMSF036L10Sequence632008027 (10)ref|XP_004249869.1|121PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]742008027 (10)ref|XP_006351018.1|151PREDICTED: uncharacterized protein LOC102596995 [Solanum tuberosum]
JMSF042H04Sequence710008027 (10)ref|XP_004249869.1|117PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]737008027 (10)ref|XP_006351018.1|151PREDICTED: uncharacterized protein LOC102596995 [Solanum tuberosum]
JMSF052A01Sequence634008027 (10)ref|XP_004249869.1|121PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]858008027 (10)ref|XP_004249869.1|216PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042H04- GTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF028J05- GTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF032E14- ATCCTGGTCTAAGAACGCTTAAAACCACCTGCAG
rJMSF036L10- ATCAACTCCATATTTCATCCTGGTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF052A01- GTCTAAGAACGCTTAAAACTACCTGCAG
                      ____________________________________________________________
consensus ATCAACTCCATATTTCATCCTGGTCTAAGAACGCTTAAAACTACCTGCAG
 
. : . : . : . : . : . :
rJMSF042H04- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF028J05- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF032E14- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF036L10- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF052A01- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
                      ____________________________________________________________
consensus GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
 
. : . : . : . : . : . :
rJMSF042H04- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF028J05- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF032E14- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF036L10- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF052A01- AAGTATTCCCAATGAATTAGACAGGAAAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
                      ____________________________________________________________
consensus AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
 
. : . : . : . : . : . :
rJMSF042H04- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF028J05- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF032E14- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF036L10- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTA
rJMSF052A01- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
                      ____________________________________________________________
consensus TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
 
. : . : . : . : . : . :
rJMSF042H04- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF028J05- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF032E14- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF036L10- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF052A01- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
                      ____________________________________________________________
consensus AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
 
. : . : . : . : . : . :
rJMSF042H04- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF028J05- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF032E14- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF036L10- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF052A01- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
                      ____________________________________________________________
consensus CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
 
. : . : . : . : . : . :
rJMSF042H04- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF028J05- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF032E14- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF036L10- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF052A01- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
                      ____________________________________________________________
consensus ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
 
. : . : . : . : . : . :
rJMSF042H04- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF028J05- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF032E14- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF036L10- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF052A01- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
                      ____________________________________________________________
consensus GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
 
. : . : . : . : . : . :
rJMSF042H04- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF028J05- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF032E14- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF036L10- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF052A01- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
                      ____________________________________________________________
consensus AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
 
. : . : . : . : . : . :
rJMSF042H04- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF028J05- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF032E14- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF036L10- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF052A01- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
JMSF052A01+ TTAC
JMSF032E14+ C
JMSF042H04+ CGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
                      ____________________________________________________________
consensus ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
 
. : . : . : . : . : . :
rJMSF042H04- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF028J05- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF032E14- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF036L10- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF052A01- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF028J05+ CTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF052A01+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF036L10+ ACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF032E14+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF042H04+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
                      ____________________________________________________________
consensus GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
 
. : . : . : . : . : . :
rJMSF042H04- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF028J05- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF032E14- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTC-A
rJMSF036L10- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF052A01- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF028J05+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF052A01+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF036L10+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF032E14+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF042H04+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
                      ____________________________________________________________
consensus CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
 
. : . : . : . : . : . :
rJMSF042H04- AAGAGTTATTGAAGGAGCCCCCATAAAA
rJMSF028J05- AAGAGTTATTGA
rJMSF032E14- AAGAGTTATTGAAGGAGCCCCCATAAA
rJMSF036L10- AAGAGTTATGGAAGGAGCCCCCATAAAACAGCA
rJMSF052A01- AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF028J05+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTCTTCAAAGCTTTCTTTGAGTCGG
JMSF052A01+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF036L10+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF032E14+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF042H04+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
                      ____________________________________________________________
consensus AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
 
. : . : . : . : . : . :
rJMSF052A01- CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF028J05+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF052A01+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF036L10+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF032E14+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF042H04+ CACGTTTNTGACGTGTCACATATNTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
                      ____________________________________________________________
consensus CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
 
. : . : . : . : . : . :
rJMSF052A01- CCGATTTCCACTTGTTCTTCCATTTCTCCAG
JMSF028J05+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF052A01+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF036L10+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF032E14+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF042H04+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
                      ____________________________________________________________
consensus CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
 
. : . : . : . : . : . :
JMSF028J05+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF052A01+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF036L10+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF032E14+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF042H04+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
                      ____________________________________________________________
consensus AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
 
. : . : . : . : . : . :
JMSF028J05+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF052A01+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF036L10+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF032E14+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF042H04+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
                      ____________________________________________________________
consensus TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
 
. : . : . : . : . : . :
JMSF028J05+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF052A01+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF036L10+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF032E14+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF042H04+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
                      ____________________________________________________________
consensus GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
 
. : . : . : . : . : . :
JMSF028J05+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF052A01+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF036L10+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF032E14+ TAATAATTCATCAGGAAAAAAAAA-GGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF042H04+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
                      ____________________________________________________________
consensus TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
 
. : . : . : . : . : . :
JMSF028J05+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF052A01+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF036L10+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF032E14+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF042H04+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
                      ____________________________________________________________
consensus GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
 
. : . : . : . : . : . :
JMSF028J05+ GCCTCGCAAAAATCGGAGAGC
JMSF052A01+ GCCTCGCAAAAATCGGAGAGCAAGAACCC
JMSF036L10+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTT
JMSF032E14+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAAC
JMSF042H04+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTTGTC
                      ____________________________________________________________
consensus GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTTGTC