| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF028J05 | Sequence | 596 | 008027 (10) | ref|XP_004249869.1| | 121 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] | 718 | 008027 (10) | ref|XP_009784701.1| | 149 | PREDICTED: uncharacterized protein LOC104233095 [Nicotiana sylvestris] |
| JMSF032E14 | Sequence | 640 | 008027 (10) | ref|XP_004249869.1| | 120 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] | 735 | 008027 (10) | ref|XP_009784701.1| | 149 | PREDICTED: uncharacterized protein LOC104233095 [Nicotiana sylvestris] |
| JMSF036L10 | Sequence | 632 | 008027 (10) | ref|XP_004249869.1| | 121 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] | 742 | 008027 (10) | ref|XP_006351018.1| | 151 | PREDICTED: uncharacterized protein LOC102596995 [Solanum tuberosum] |
| JMSF042H04 | Sequence | 710 | 008027 (10) | ref|XP_004249869.1| | 117 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] | 737 | 008027 (10) | ref|XP_006351018.1| | 151 | PREDICTED: uncharacterized protein LOC102596995 [Solanum tuberosum] |
| JMSF052A01 | Sequence | 634 | 008027 (10) | ref|XP_004249869.1| | 121 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] | 858 | 008027 (10) | ref|XP_004249869.1| | 216 | PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF042H04- GTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF028J05- GTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF032E14- ATCCTGGTCTAAGAACGCTTAAAACCACCTGCAG
rJMSF036L10- ATCAACTCCATATTTCATCCTGGTCTAAGAACGCTTAAAACTACCTGCAG
rJMSF052A01- GTCTAAGAACGCTTAAAACTACCTGCAG
____________________________________________________________
consensus ATCAACTCCATATTTCATCCTGGTCTAAGAACGCTTAAAACTACCTGCAG
. : . : . : . : . : . :
rJMSF042H04- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF028J05- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF032E14- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF036L10- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
rJMSF052A01- GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
____________________________________________________________
consensus GTTTTCTATAGTATCTAATCAACAAATATACATATCCCTATTTGGAAAATTACATGTAAA
. : . : . : . : . : . :
rJMSF042H04- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF028J05- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF032E14- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF036L10- AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
rJMSF052A01- AAGTATTCCCAATGAATTAGACAGGAAAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
____________________________________________________________
consensus AAGTATTCCCAATGAATTAGACAGG-AAAAAAAATGGAAACTATGCTGGGGAGAGAGCAC
. : . : . : . : . : . :
rJMSF042H04- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF028J05- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF032E14- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
rJMSF036L10- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTA
rJMSF052A01- TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
____________________________________________________________
consensus TGCATAGTGACTTGTATGCTGCAGCGCAACACTTGAATTTCTCTTCTGCTGCTGCCTGTG
. : . : . : . : . : . :
rJMSF042H04- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF028J05- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF032E14- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF036L10- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
rJMSF052A01- AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
____________________________________________________________
consensus AAGGTCCTTGATGCTTATCAGGATGCCACTTCAAAGCTGAGAGACGAAAAGCATTCTTGA
. : . : . : . : . : . :
rJMSF042H04- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF028J05- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF032E14- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF036L10- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
rJMSF052A01- CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
____________________________________________________________
consensus CATCCTCAATCTTCAAAGGACCCCTGATAGGCAGACCAAGGATTGATCTTTCAGAGTATG
. : . : . : . : . : . :
rJMSF042H04- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF028J05- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF032E14- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF036L10- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
rJMSF052A01- ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
____________________________________________________________
consensus ATCCTACAATACAAGACTCACTATTGTACTTGGTATCAGATCCATTTTCCCAATTATACT
. : . : . : . : . : . :
rJMSF042H04- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF028J05- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF032E14- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF036L10- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
rJMSF052A01- GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
____________________________________________________________
consensus GTCTGCCACTCCATTCTGTTTCTTCTCCATGGTGAAATTGCGTTTTTGAACCATCAAAAG
. : . : . : . : . : . :
rJMSF042H04- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF028J05- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF032E14- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF036L10- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
rJMSF052A01- AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
____________________________________________________________
consensus AGTATTCCTTCCTAGGCTTATGCGACCAGGTGTACCATTTGCCAGCAAAGGTTGCTTGGA
. : . : . : . : . : . :
rJMSF042H04- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF028J05- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF032E14- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF036L10- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
rJMSF052A01- ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
JMSF052A01+ TTAC
JMSF032E14+ C
JMSF042H04+ CGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
____________________________________________________________
consensus ATATTTTCTCCGGATGTTCATTCCAATCTTCTTCATCTAACCACTCATTCTTTAGTTTAC
. : . : . : . : . : . :
rJMSF042H04- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF028J05- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF032E14- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF036L10- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
rJMSF052A01- GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF028J05+ CTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF052A01+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF036L10+ ACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF032E14+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
JMSF042H04+ GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
____________________________________________________________
consensus GTTGCCTTCTCCTTATGCGAGTTCTACTACGAGCAGAAGTCTTGAGTTTACATTTCTTGT
. : . : . : . : . : . :
rJMSF042H04- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF028J05- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF032E14- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTC-A
rJMSF036L10- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
rJMSF052A01- CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF028J05+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF052A01+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF036L10+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF032E14+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
JMSF042H04+ CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
____________________________________________________________
consensus CCAAATGTTCATCTGGCTCTTCATCCCATCCCAAATTTTCTCTTGGAGATTTTTCCTCAA
. : . : . : . : . : . :
rJMSF042H04- AAGAGTTATTGAAGGAGCCCCCATAAAA
rJMSF028J05- AAGAGTTATTGA
rJMSF032E14- AAGAGTTATTGAAGGAGCCCCCATAAA
rJMSF036L10- AAGAGTTATGGAAGGAGCCCCCATAAAACAGCA
rJMSF052A01- AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF028J05+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTCTTCAAAGCTTTCTTTGAGTCGG
JMSF052A01+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF036L10+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF032E14+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
JMSF042H04+ AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
____________________________________________________________
consensus AAGAGTTATTGAAGGAGCCCCCATAAAACAGCAGATTTTTCAAAGCTTTCTTTGAGTCGG
. : . : . : . : . : . :
rJMSF052A01- CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF028J05+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF052A01+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF036L10+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF032E14+ CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
JMSF042H04+ CACGTTTNTGACGTGTCACATATNTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
____________________________________________________________
consensus CACGTTTCTGACGTGTCACATATCTGATATAATTCTTTGATGCTTGTTGGGGTCTAAAAT
. : . : . : . : . : . :
rJMSF052A01- CCGATTTCCACTTGTTCTTCCATTTCTCCAG
JMSF028J05+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF052A01+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF036L10+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF032E14+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
JMSF042H04+ CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
____________________________________________________________
consensus CCGATTTCCACTTGTTCTTCCATTTCTCCAGAGAAAGGGGAGTAGAATGGAAGAAAGCGA
. : . : . : . : . : . :
JMSF028J05+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF052A01+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF036L10+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF032E14+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
JMSF042H04+ AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
____________________________________________________________
consensus AATGGTTAGCCGGTGGTTCGGTGACTGCTGCTATTTTCGTGGATTGGAAAATTAATTTTT
. : . : . : . : . : . :
JMSF028J05+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF052A01+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF036L10+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF032E14+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
JMSF042H04+ TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
____________________________________________________________
consensus TCAAACTCGAAACTTTTTGCCATCTGGGTATTGCCTGCATTGTTATCTTGCNATAGTAGA
. : . : . : . : . : . :
JMSF028J05+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF052A01+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF036L10+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF032E14+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
JMSF042H04+ GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
____________________________________________________________
consensus GACTAAAACTGAAATGAATTATCTTTCCAAAACAAAAAAACTGTAATGAATTTTATTCAA
. : . : . : . : . : . :
JMSF028J05+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF052A01+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF036L10+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF032E14+ TAATAATTCATCAGGAAAAAAAAA-GGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
JMSF042H04+ TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
____________________________________________________________
consensus TAATAATTCATCAGGAAAAAAAAAGGGGGCAGGAAAAGATTTTAAAATTTAAAAATTGAA
. : . : . : . : . : . :
JMSF028J05+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF052A01+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF036L10+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF032E14+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
JMSF042H04+ GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
____________________________________________________________
consensus GAATATGCTACAGAGTAATTGCTACGCCAGTTTTTTGGCGAGAAGAAAACTGGTAACAGC
. : . : . : . : . : . :
JMSF028J05+ GCCTCGCAAAAATCGGAGAGC
JMSF052A01+ GCCTCGCAAAAATCGGAGAGCAAGAACCC
JMSF036L10+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTT
JMSF032E14+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAAC
JMSF042H04+ GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTTGTC
____________________________________________________________
consensus GCCTCGCAAAAATCGGAGAGCAAGAACCCAATTCTTAACGTGTGACCTCAGCTTCTTGTC