Contig 008026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017A12Sequence519008026 (2)ref|XP_006362531.1|222PREDICTED: NAC domain-containing protein 8-like [Solanum tuberosum]775009674 (2)emb|CDP00573.1|9e-37unnamed protein product [Coffea canephora]
JMSF042E22Sequence796008026 (2)ref|XP_009614315.1|9e-92PREDICTED: NAC domain-containing protein 8 isoform X2 [Nicotiana tomentosiformi818009674 (2)emb|CDP00573.1|2e-42unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF042E22+                                                       TGCGACCAGTCTTGTG
                      ____________________________________________________________
consensus                                                         TGCGACCAGTCTTGTG
 
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JMSF042E22+           CCAACGAACATCTCCAAAATTATCGCCATGTATCTTTCGACGCTTTCGAGTTCCAGTGTT
                      ____________________________________________________________
consensus             CCAACGAACATCTCCAAAATTATCGCCATGTATCTTTCGACGCTTTCGAGTTCCAGTGTT
 
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JMFF017A12+                    GATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTANCACCAGG
JMSF042E22+           ATAGGCTTTGATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTAACACCAGG
                      ____________________________________________________________
consensus             ATAGGCTTTGATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTAACACCAGG
 
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JMFF017A12+           TAAATTTTGAGGATGCGTGTAGCATATCCCATCATNTTCATTAACTGTCGGAATGAACTC
JMSF042E22+           TAAATTTTGAGGATGCGTGTAGCATATCCCATCATCTTCATTAACTGTCGGAATGAACTC
                      ____________________________________________________________
consensus             TAAATTTTGAGGATGCGTGTAGCATATCCCATCATCTTCATTAACTGTCGGAATGAACTC
 
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JMFF017A12+           ATNGATAAAAGGATGAGATTTCAAATCANTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
JMSF042E22+           ATCGATAAAAGGATGAGATTTCAAATCATTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
                      ____________________________________________________________
consensus             ATCGATAAAAGGATGAGATTTCAAATCATTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
 
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JMFF017A12+           AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
JMSF042E22+           AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
                      ____________________________________________________________
consensus             AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
 
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JMFF017A12+           TACATCACTATTGTCAATAATATAGTGGCANCTGGGGCAAGTTCTTGTAGGATTGCTTTT
JMSF042E22+           TACATCACTATTGTCAATAATATAGTGGCAACTGGGGCAAGTTCTTGTAGGATTGCTTTT
                      ____________________________________________________________
consensus             TACATCACTATTGTCAATAATATAGTGGCAACTGGGGCAAGTTCTTGTAGGATTGCTTTT
 
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JMFF017A12+           CCAGTTAATATTTCCTGGATCATNTGATGCACTTNTAATCTTTGTTGCGATTCTCTTACT
JMSF042E22+           CCAGTTAATATTTCCTGGATCATCTGATGCACTTCTAATCTTTGTTGCGATTCTCTTACT
                      ____________________________________________________________
consensus             CCAGTTAATATTTCCTGGATCATCTGATGCACTTCTAATCTTTGTTGCGATTCTCTTACT
 
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JMFF017A12+           GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
JMSF042E22+           GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
                      ____________________________________________________________
consensus             GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
 
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JMFF017A12+           CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
JMSF042E22+           CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
                      ____________________________________________________________
consensus             CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
 
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JMFF017A12+           CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGC            
JMSF042E22+           CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGCATTTTGATTTTA
                      ____________________________________________________________
consensus             CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGCATTTTGATTTTA
 
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JMSF042E22+           GTTTGACTCCATCTTTATCCAGTAGTTCAATAATCGATACGCACACTGTCACCTCCAGGC
                      ____________________________________________________________
consensus             GTTTGACTCCATCTTTATCCAGTAGTTCAATAATCGATACGCACACTGTCACCTCCAGGC
 
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JMSF042E22+           TCCACACCCAAACAAATTTAGTGAATAATATTCGATTCGTCTTTCTTGACCAATCTCACG
                      ____________________________________________________________
consensus             TCCACACCCAAACAAATTTAGTGAATAATATTCGATTCGTCTTTCTTGACCAATCTCACG
 
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JMSF042E22+           TCCCACCTCCTCAGTCCACACACAATCACCTTCAAAGCGCGGAGACCAAACTACAAACCC
                      ____________________________________________________________
consensus             TCCCACCTCCTCAGTCCACACACAATCACCTTCAAAGCGCGGAGACCAAACTACAAACCC