Contig 008022:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS105B05Sequence620008022 (7)emb|CDP06120.1|9e-86unnamed protein product [Coffea canephora]
JMSF012N12Sequence498008022 (7)emb|CDP06120.1|2e-44unnamed protein product [Coffea canephora]771017101gb|KDO53447.1|2e-26hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF023H03Sequence677008022 (7)emb|CDP06120.1|8e-90unnamed protein product [Coffea canephora]724006827 (4)gb|KDO53448.1|6e-81hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF034K15Sequence661008022 (7)emb|CDP06120.1|1e-85unnamed protein product [Coffea canephora]702006827 (4)gb|KDO53447.1|2e-73hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF039D21Sequence654008022 (7)emb|CDP06120.1|2e-94unnamed protein product [Coffea canephora]901005775 (3)ref|XP_004243200.1|9e-74PREDICTED: endoplasmic reticulum oxidoreductin-1 [Solanum lycopersicum]
JMSF039N21Sequence669008022 (7)emb|CDP06120.1|3e-79unnamed protein product [Coffea canephora]836020481gb|KDO53448.1|4e-31hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]
JMSF042B02Sequence785008022 (7)emb|CDP06120.1|4e-99unnamed protein product [Coffea canephora]830006827 (4)gb|KDO53447.1|6e-100hypothetical protein CISIN_1g0125551mg, partial [Citrus sinensis]

Alignment

This contig is upended


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JMSF042B02+                                                                  CCTGG
                      ____________________________________________________________
consensus                                                                    CCTGG
 
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JMSF039D21+                                                          CATCCCATATCCT
JMSF042B02+           CACATCTCTCCAAAGGCATATTTTNGGGCAGTTTTCTGAATAAATTTCATCCCATATCCT
                      ____________________________________________________________
consensus             CACATCTCTCCAAAGGCATATTTTNGGGCAGTTTTCTGAATAAATTTCATCCCATATCCT
 
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JMSF023H03+             TGGCTGATGGCCCACTATAGCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
JMSF039N21+                                                     CAGTAGGAGATTTACATA
JMSF034K15+                               AGCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
JMSF039D21+           TCTGGCTGATGGCCCACTATAGCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
JMFS105B05+                                GCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
JMSF042B02+           TCTGGCTGATGGCCCACTATAGCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
                      ____________________________________________________________
consensus             TCTGGCTGATGGCCCACTATAGCCAGTGTAGCGCTCAGGGTTCAGTAGGAGATTTACATA
 
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JMSF023H03+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
JMSF039N21+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
JMSF034K15+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
JMSF039D21+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
JMFS105B05+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
JMSF042B02+           GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
                      ____________________________________________________________
consensus             GGTCATTTCATCATTATCAGTTTCATCATCATGCGTCCAAGGATTATCTACTTCCATCCA
 
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JMSF023H03+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
JMSF039N21+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
JMSF034K15+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
JMSF039D21+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
JMFS105B05+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
JMSF042B02+           GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
                      ____________________________________________________________
consensus             GCCCCTAAAAGCCTTAGAGTCTAATGTGCGGTCAACTGCAGCCTGTGGCTTTCCCTCCTG
 
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JMSF023H03+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMSF012N12+            CAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMSF039N21+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMSF034K15+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMSF039D21+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMFS105B05+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
JMSF042B02+           GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
                      ____________________________________________________________
consensus             GCAAATAGGATCATCAGATCCAAGACCATGTAGCAGAGGCCTCTTAAAAGGTTCTGGGAA
 
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JMSF023H03+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
JMSF012N12+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACGTACCATCGTCTGG
JMSF039N21+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
JMSF034K15+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
JMSF039D21+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
JMFS105B05+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
JMSF042B02+           TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
                      ____________________________________________________________
consensus             TTCATTTTCCGGACATTCACACACGCTACAGTCACGCAACTTACACATACCATCGTCTGG
 
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JMSF023H03+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMSF012N12+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMSF039N21+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMSF034K15+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMSF039D21+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMFS105B05+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
JMSF042B02+           CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
                      ____________________________________________________________
consensus             CCAAAAAGGGCAGTCACACCATAACTTCACCTTAAAGTATCGGAAGAATGGAGTTGTAAC
 
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JMSF023H03+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMSF012N12+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMSF039N21+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMSF034K15+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMSF039D21+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMFS105B05+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
JMSF042B02+           AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
                      ____________________________________________________________
consensus             AAGCTCTTGGAGTAAAGGATGCAGTACAGCTGCATTAAGAGTGTCAACTGTTTCATAATC
 
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JMSF023H03+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMSF012N12+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMSF039N21+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMSF034K15+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMSF039D21+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMFS105B05+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
JMSF042B02+           ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
                      ____________________________________________________________
consensus             ACAGCAGCAGTCCTCAACAATTCCAGTATATTTTCGAGAATCCTGAGCACAGGGACAAGA
 
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JMSF023H03+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMSF012N12+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMSF039N21+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMSF034K15+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMSF039D21+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMFS105B05+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
JMSF042B02+           TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
                      ____________________________________________________________
consensus             TTTGAAATTCTGTGCAGGAAAAAACCCTACTGCTAATGCTATCACCACCGCCGCCACCGC
 
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JMSF023H03+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMSF012N12+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMSF039N21+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMSF034K15+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMSF039D21+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMFS105B05+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
JMSF042B02+           TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
                      ____________________________________________________________
consensus             TCCAATCGGCATCCACCCCCATCTTCTTCCTTTCTTCTTCTTACTCTTCTCTCTCCCTTT
 
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JMSF023H03+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
JMSF012N12+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
JMSF039N21+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
JMSF034K15+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
JMSF039D21+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACAT                    
JMFS105B05+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATA                   
JMSF042B02+           CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
                      ____________________________________________________________
consensus             CCTCTCTTCGACCTCAGCTTCCACCATTTCGCCTATACATACATTGATCTGTATCTACAC
 
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JMSF023H03+           CTGTATTAATATGTACAC                                          
JMSF012N12+           CTGTATTAATATGTACAC                                          
JMSF039N21+           CTGTATTAATATGTACACAGAAAAATAAGAATTCCTAATCTCAGCTTTA           
JMSF034K15+           CTGTATTAATATGTACAC                                          
JMSF042B02+           CTGTATTAATATGTACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCATC
                      ____________________________________________________________
consensus             CTGTATTAATATGTACACAGAAAAATAAGAATTCCTAATCTCAGCTTTATGCCGTCCATC