| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF051D15 | Sequence | 589 | 008020 (7) | ref|XP_009783429.1| | 7e-62 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 550 | 004173 (6) | ref|XP_010038681.1| | 6e-36 | PREDICTED: putative acyl-coenzyme A oxidase At3g06690 [Eucalyptus grandis] |
| JMFS147H09 | Sequence | 627 | 008020 (7) | ref|XP_009783429.1| | 6e-108 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | |||||
| JMSF004L01 | Sequence | 414 | 008020 (7) | ref|XP_009783429.1| | 6e-50 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 470 | 004173 (6) | ref|XP_002525155.1| | 2e-39 | acyl-CoA oxidase, putative [Ricinus communis] gb|EEF37282.1| acyl-CoA oxidase, p |
| JMSF022M10 | Sequence | 596 | 008020 (7) | ref|XP_009783429.1| | 9e-89 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvest | 752 | 004173 (6) | ref|XP_009621612.1| | 4e-80 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento |
| JMSF037J20 | Sequence | 715 | 008020 (7) | ref|XP_009621605.1| | 2e-92 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | 744 | 004173 (6) | ref|XP_009621605.1| | 8e-88 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento |
| JMSF041N24 | Sequence | 1068 | 008020 (7) | ref|XP_011100229.1| | 6e-53 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Sesamum indicum] | 708 | 004173 (6) | ref|XP_009621612.1| | 4e-77 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X3 [Nicotiana tomento |
| JMSF044A02 | Sequence | 787 | 008020 (7) | ref|XP_009621605.1| | 1e-150 | PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana tomento | |||||
This contig is upended
. : . : . : . : . : . :
JMSF044A02+ TGAGCGATAAATGCATGAACCCCCTGATTTTTCCCATCAATGTTGAGTTGT
____________________________________________________________
consensus TGAGCGATAAATGCATGAACCCCCTGATTTTTCCCATCAATGTTGAGTTGT
. : . : . : . : . : . :
JMSF044A02+ GAAAAAACAACTGTATGCGTTGCATGATTAGCTGCACCACCAATCGAATACTTCTGAGCT
____________________________________________________________
consensus GAAAAAACAACTGTATGCGTTGCATGATTAGCTGCACCACCAATCGAATACTTCTGAGCT
. : . : . : . : . : . :
JMSF044A02+ GACTCACATGGAGTGTTAATGACAAACTCTCCAGTACTCGAATCATAAGTTGTAACTGTT
JMSF037J20+ ATGACAAACTCTCCAGTACTCGAATCATAAGTNGTAACTGTT
____________________________________________________________
consensus GACTCACATGGAGTGTTAATGACAAACTCTCCAGTACTCGAATCATAAGTTGTAACTGTT
. : . : . : . : . : . :
JMSF044A02+ TCTATACCTCGAACATTACTTCCATGCCCTAACTCCGTCATGGCAAAGCAACCTTTAACC
JMFS147H09+ ATACCTCGAACATTACTTCCATGCCCTAACTCCGTCATGGCAAAGCAACCTTTAACC
JMSF037J20+ TCTATACCTCGAACATTACTTCCATGCCCTAACTCCGTCATGGCAAAGCAACCTTTAACC
____________________________________________________________
consensus TCTATACCTCGAACATTACTTCCATGCCCTAACTCCGTCATGGCAAAGCAACCTTTAACC
. : . : . : . : . : . :
JMSF044A02+ AAATAATTTTCAGAATCCCTCAGCCACTTATCGTGGTGGCGCTTAGTACCAAAAAATTGG
JMFS147H09+ AAATAATTTTCAGAATCCCTCAGCCACTTATCGTGGTGGCGCTTAGTACCAAAAAATTGG
JMSF037J20+ AAATAATTTTCAGAATCCCTCAGCCACTTATCGTGGTGGCGCTTAGTACCAAAAAATTGG
JMSF022M10+ TCAGCCACTTATCGTGGTGGCGCTTAGTACCAAAAAATTGG
____________________________________________________________
consensus AAATAATTTTCAGAATCCCTCAGCCACTTATCGTGGTGGCGCTTAGTACCAAAAAATTGG
. : . : . : . : . : . :
JMSF044A02+ ATTGCTCCTCCCCAGAGAAAGAAATGAACGCCAAGTTTGATAGACAATGAATGGTCAAAA
JMFS147H09+ ATTGCTCCTCCCCAGAGAAAGAAATGAACGCCAAGTTTGATAGACAATGAATGGTCAAAA
JMSF037J20+ ATTGCTCCTCCCCAGAGAAAGAAATGAACGCCAAGTTTGATAGACAATGAATGGTCAAAA
JMSF022M10+ ATTGCTCCTCCCCAGAGAAAGAAATGAACGCCAAGTTTGATAGACAATGAATGGTCAAAA
____________________________________________________________
consensus ATTGCTCCTCCCCAGAGAAAGAAATGAACGCCAAGTTTGATAGACAATGAATGGTCAAAA
. : . : . : . : . : . :
JMSF044A02+ ATGGTAGTAACATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
JMFS147H09+ ATGGTAGTAACATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
JMSF037J20+ ATGGTAGTAACATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
JMSF022M10+ ATGGTAGTAACATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
JMFF051D15+ ATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
JMSF041N24+ TCCAAAAGAGCAAGNTTCTTCAGGTCAGCTTCCGGTCCTTTTTCAGTC
____________________________________________________________
consensus ATGGTAGTAACATCCAAAAGAGCAAGCTTCCTCAGCTCAGCTTCCGGTCCTTTCTCAGTC
. : . : . : . : . : . :
JMSF044A02+ AGCCATCCCCGGAAAACCCCGCAATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMFS147H09+ AGCCATCCCCGGAAAACCCCGCAATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMSF037J20+ AGCCATCCCCGGAAAACCCCGCAATC--AGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMSF022M10+ AGCCATCCCCGGAAAACCCCGCAATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMSF004L01+ AATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMFF051D15+ AGCCATCCCCGGAAAACCCCGCAATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
JMSF041N24+ AGCCATCCCCGGNAAANCCCGCAATCCGAGAGGTACGNGATTNTCCTCATCGNGATCTCT
____________________________________________________________
consensus AGCCATCCCCGGAAAACCCCGCAATCCGAGAGGTACGCGATTCTCCTCATCGTGATCTCT
. : . : . : . : . : . :
JMSF044A02+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMFS147H09+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMSF037J20+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMSF022M10+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMSF004L01+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMFF051D15+ CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
JMSF041N24+ TTNTGNTGGNTCCATCGACTGGTTAAAATCCGGNCCATACATACACTTTNACCACCCCTT
____________________________________________________________
consensus CTCTGCT-GCTCCATCGACTGGTTAAAATCCGG-CCATACATACACTTT-ACCACCCCTT
. : . : . : . : . : . :
JMSF044A02+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMFS147H09+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMSF037J20+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMSF022M10+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMSF004L01+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMFF051D15+ GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
JMSF041N24+ GATCTTTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCNTC
____________________________________________________________
consensus GATC-TTGGGTTGAACAGCCTGCTCTGTATCATGAGGCCATAGAGCCAGTCCCTCTCCTC
. : . : . : . : . : . :
JMSF044A02+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
JMFS147H09+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
JMSF037J20+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
JMSF022M10+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCAGCTACGTCGAAAGACGCCGCCGGTTC
JMSF004L01+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
JMFF051D15+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
JMSF041N24+ CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
____________________________________________________________
consensus CAAGTTGTGTCCGTCCATCAACTTCCGCATCTCGGCTACGTCGAAAGACGCCGCCGGTTC
. : . : . : . : . : . :
JMSF044A02+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMFS147H09+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMSF037J20+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMSF022M10+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMSF004L01+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMFF051D15+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
JMSF041N24+ GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
____________________________________________________________
consensus GGATAGCTCCGGCGGCGTGTAGCCGATGCAGGGCGAGGATTGTAGTAGGATATCATCGTC
. : . : . : . : . : . :
JMSF044A02+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMFS147H09+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMSF037J20+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMSF022M10+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMSF004L01+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMFF051D15+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
JMSF041N24+ AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
____________________________________________________________
consensus AACACATGGGTTTTCTTGGATTAGGTGTCTGGTAAGGACATGGGTTCTGAAATTGGCTTT
. : . : . : . : . : . :
JMSF044A02+ CTCCATGGACGATAACGAT
JMFS147H09+ CTCCATGGACGATAACGATGAAGACTCCAATCTC
JMSF037J20+ CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
JMSF022M10+ CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
JMSF004L01+ CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
JMFF051D15+ CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
JMSF041N24+ CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
____________________________________________________________
consensus CTCCATGGACGATAACGATGAAGACTCCAATCTCCAGAGTTGATTAAGCTTTAAACAAAC
. : . : . : . : . : . :
JMSF037J20+ GTTTGCTTCAGCGGA
JMSF022M10+ GTTTGCTTCAGCGGAT
JMSF004L01+ GTTTGCTTCAGCGGAT
JMFF051D15+ GTTTGCTTCAGCGGATGTCGATCCAAGAAAAAGACGGACGATATTTATTGTGTCTCTATG
JMSF041N24+ GTTTGCTTCAGCGGATGTCGATCCAAGAAAAAGACGGACGATATTTATTGTGTCTCTATG
____________________________________________________________
consensus GTTTGCTTCAGCGGATGTCGATCCAAGAAAAAGACGGACGATATTTATTGTGTCTCTATG
. : . : . : . : . : . :
JMFF051D15+ C
JMSF041N24+ CAGAGAAAGACTTGAACACCAATCTTGATAGCCAATGAGAAGTCAAAAATGGCAATAACT
____________________________________________________________
consensus CAGAGAAAGACTTGAACACCAATCTTGATAGCCAATGAGAAGTCAAAAATGGCAATAACT
. : . : . : . : . : . :
JMSF041N24+ TCACAAAGAGCAACCTTCCTCAACTCAGCTTCCGCCTGATCATTCTCCGTCAGCCATCCT
____________________________________________________________
consensus TCACAAAGAGCAACCTTCCTCAACTCAGCTTCCGCCTGATCATTCTCCGTCAGCCATCCT
. : . : . : . : . : . :
JMSF041N24+ CGAAACACCCCACAATCCGACAGGTACTCAATTCTCCTCATCGTCATCTCCCTCTGCTGT
____________________________________________________________
consensus CGAAACACCCCACAATCCGACAGGTACTCAATTCTCCTCATCGTCATCTCCCTCTGCTGT
. : . : . : . : . : . :
JMSF041N24+ TCCATTGCCTGGTTATAATCCGCCCCGACATGCACTCTACCGCCCATTGATCTAGGGTTG
____________________________________________________________
consensus TCCATTGCCTGGTTATAATCCGCCCCGACATGCACTCTACCGCCCATTGATCTAGGGTTG
. : . : . : . : . : . :
JMSF041N24+ AACACCTTGCTCTGTATCATCACCCCATACAGCCAGTCCCTCTCCTGCAAATTGTGTCCG
____________________________________________________________
consensus AACACCTTGCTCTGTATCATCACCCCATACAGCCAGTCCCTCTCCTGCAAATTGTGTCCG
. : . : . : . : . : . :
JMSF041N24+ TCCATCAACTTCCGCATCTCGAACACGTCGAAACGCGCCGCCGGTTCGGATGCCTCCGCC
____________________________________________________________
consensus TCCATCAACTTCCGCATCTCGAACACGTCGAAACGCGCCGCCGGTTCGGATGCCTCCGCC
. : . : . : . : . : . :
JMSF041N24+ GGCGTGTAGCTGATGCACGGCGAGGATTGGAGTAGGACATCATCATCGTCGAGATTTGGG
____________________________________________________________
consensus GGCGTGTAGCTGATGCACGGCGAGGATTGGAGTAGGACATCATCATCGTCGAGATTTGGG
. : . : . : . : . : . :
JMSF041N24+ TTTTGTTGATTGAGGAGGTGTCTGGTTAGGACGTTGGTTCTGAAACTCGCTCTCTCCATC
____________________________________________________________
consensus TTTTGTTGATTGAGGAGGTGTCTGGTTAGGACGTTGGTTCTGAAACTCGCTCTCTCCATC