Contig 008018:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041L08Sequence107008018 (2)719011394 (2)ref|XP_009773235.1|9e-64PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X2 [Nicotiana sylv
JMSF045I13Sequence127008018 (2)560011394 (2)ref|XP_009597876.1|5e-77PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X2 [Nicotiana tome

Alignment

This contig is upended


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JMSF045I13+                                                                GGNGCCT
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consensus                                                                  GGNGCCT
 
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JMSF045I13+           TAAAGCTGNGACAAAGACAAAAAANAAGGAAGTGAATTCGAAAGNTTCAGAACGTAATGA
JMSF041L08+                             AAAAAAAAAGGAAGTGAATTCGAAAGCTTCAGAACGTAATGA
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consensus             TAAAGCTGNGACAAAGACAAAAAAAAAGGAAGTGAATTCGAAAGCTTCAGAACGTAATGA
 
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JMSF045I13+           ACGCCTTAGCCGAGAGAGAAAGAGAAACCCTAATCGCGGTCGGGTAANGCNCGAGCAG  
JMSF041L08+           ACGCCTTAGCCGAGAGAGAAAGAGAAACCCTAATCACGGTCGGGTAATGCACGAGCAGCC
                      ____________________________________________________________
consensus             ACGCCTTAGCCGAGAGAGAAAGAGAAACCCTAATCGCGGTCGGGTAATGCACGAGCAGCC