Contig 008016:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041I22-                                ACCAACATCTATTCTATGAACATATATAATTGAGAAAC
                      ____________________________________________________________
consensus                                   ACCAACATCTATTCTATGAACATATATAATTGAGAAAC
 
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rJMSF041I22-          TTACATGATTCCTTTCTAGTCAAAATACGGGCATGTGTTCCATCAAAAGCTTAAGCTGAT
                      ____________________________________________________________
consensus             TTACATGATTCCTTTCTAGTCAAAATACGGGCATGTGTTCCATCAAAAGCTTAAGCTGAT
 
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rJMSF041I22-          AGTTGGATTGCACATTGTAATAGTTTCATGGTTTGATACAAGTAAATAGTTTAATCTCTA
rJMSF010E02-                             ATAGTTTCATGGTTTGATACAAGTAAATAGTTTAATCTCTA
                      ____________________________________________________________
consensus             AGTTGGATTGCACATTGTAATAGTTTCATGGTTTGATACAAGTAAATAGTTTAATCTCTA
 
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rJMSF041I22-          AATCATAATAATATCAACTGAACTAATATCATTGAAACCAAAATTGAACTATTACTCCAT
rJMSF010E02-          AATCATAATAATATCAACTGAACTAATATCATTGAAACCAAAATTGAACTATTACTCCAT
                      ____________________________________________________________
consensus             AATCATAATAATATCAACTGAACTAATATCATTGAAACCAAAATTGAACTATTACTCCAT
 
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rJMSF041I22-          TGTTATGAGGTGTCTCAAACGAGAAGATAGTTGTTGTAGTTACACAAGCACAGCAACAAT
rJMSF010E02-          TGTTATGAGGTGTCTCAAACGAGAAGATAGTTGTTGTAGTTACACAAGCACAGCAACAAT
                      ____________________________________________________________
consensus             TGTTATGAGGTGTCTCAAACGAGAAGATAGTTGTTGTAGTTACACAAGCACAGCAACAAT
 
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rJMSF041I22-          GCAAGCAAGAGTAGAAGAGCGAACAAGCAAGCTATGCATTACCTTCATTCGAGTCGTAAA
rJMSF010E02-          GCAAGCAAGAGTAGAAGAGCGAACAAGCAAGCTATGCATTACCTTCATTCGAGTCGTAAA
                      ____________________________________________________________
consensus             GCAAGCAAGAGTAGAAGAGCGAACAAGCAAGCTATGCATTACCTTCATTCGAGTCGTAAA
 
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rJMSF041I22-          TGGGCAATGCCACAGAATCCAAAAGCTTCAAGTGAAGAGCCCTGATGCCAGCCCACTTCT
rJMSF010E02-          TGGGCAATGCCACAGAATCCAAAAGCTTCAAGTGAAGAGCCCTGATGCCAGCCCACTTCT
                      ____________________________________________________________
consensus             TGGGCAATGCCACAGAATCCAAAAGCTTCAAGTGAAGAGCCCTGATGCCAGCCCACTTCT
 
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rJMSF041I22-          TGGGAACAAGAGAAGCGATTGCGTCTATAGCAGCAACAACATTCTCCATTATTTCTTGAC
rJMSF010E02-          TGGGAACAAGAGAAGCGATTGCGTCTATAGCAGCAACAACATTCTCCATTATTTCTTGAC
                      ____________________________________________________________
consensus             TGGGAACAAGAGAAGCGATTGCGTCTATAGCAGCAACAACATTCTCCATTATTTCTTGAC
 
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rJMSF041I22-          TATCCATAACTCCATTCCCATTCCCAACCTTCACCGCAGTACAAGTCCCGGACCCGAAAC
rJMSF010E02-          TATCCATAACTCCATTCCCATTCCCAACCTTCACCGCAGTACAAGTCCCGGACCCGAAAC
JMSF041I22+                             CATTCCCAACCTTCACCGCAGTACAAGTCCCGGACCCGAAAC
                      ____________________________________________________________
consensus             TATCCATAACTCCATTCCCATTCCCAACCTTCACCGCAGTACAAGTCCCGGACCCGAAAC
 
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rJMSF041I22-          ACAACAGAGTCGATTTACAAGCAGCAGCTGCATTCATCTCCTCCTTCCAGTTCCCATTAC
rJMSF010E02-          ACAACAGAGTCGATTTACAAGCAGCAGCTGCATTCATCTCCTCCTTCCAGTTCCCATTAC
JMSF041I22+           ACAACAGAGTCGATTTACAAGCAGCAGCTGCATTCATCTCCTCCTTCCAGTTCCCATTAC
                      ____________________________________________________________
consensus             ACAACAGAGTCGATTTACAAGCAGCAGCTGCATTCATCTCCTCCTTCCAGTTCCCATTAC
 
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rJMSF041I22-          CCTTCAATTCCACCGGCACTGGAACCCTCTTCTTGTTCTTGTAAAATTGTTTCCCCAGAA
rJMSF010E02-          CCTTCAATTCCACCGGCACTGGAACCCTCTTCTTGTTCTTGTAAAATTGTTTCCCCAGAA
JMSF041I22+           CCTTCAATTCCACCGGCACTGGAACCCTCTTCTTGTTCTTGTAAAATTGTTTCCCCAGAA
                      ____________________________________________________________
consensus             CCTTCAATTCCACCGGCACTGGAACCCTCTTCTTGTTCTTGTAAAATTGTTTCCCCAGAA
 
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rJMSF041I22-          CGCCCGGAAGCAAATGAACCACCCTTTTATCTGCCAGAAACAAGTCATGCGATTCGTTTA
rJMSF010E02-          CGCCCGGAAGCAAATGAACCACCCTTTTATCTGCCAGAAACAAGTCATGCGATTCGTTTA
JMSF041I22+           CGCCCGGAAGCAAATGAACCACCCTTTTATCTGCCAGAAACAAGTCATGCGATTCGTTTA
                      ____________________________________________________________
consensus             CGCCCGGAAGCAAATGAACCACCCTTTTATCTGCCAGAAACAAGTCATGCGATTCGTTTA
 
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rJMSF041I22-          GCTTTCGCTTGGCCTCGAATGATTTGAAGTCGGATTT                       
rJMSF010E02-          GCTTTCGCTTGGCCTCGAATGATTTGAAGTCGGATTTGAGCTTGGAGAGCTTGAGGACTC
JMSF041I22+           GCTTTCGCTTGGCCTCGAATGATTTGAAGTCGGATTTGAGCTTGGAGAGCTTGAGGACTC
                      ____________________________________________________________
consensus             GCTTTCGCTTGGCCTCGAATGATTTGAAGTCGGATTTGAGCTTGGAGAGCTTGAGGACTC
 
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rJMSF010E02-          TGGTGATTGGGATACCTAGGGATTTAATCTTCTTCTGTACGGC                 
JMSF041I22+           TGGTGATTGGGATACCTAGGGATTTAATCTTCTTCTGTACGGCCTCGGAGGCGAGTGTGG
                      ____________________________________________________________
consensus             TGGTGATTGGGATACCTAGGGATTTAATCTTCTTCTGTACGGCCTCGGAGGCGAGTGTGG
 
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JMSF010E02+                                                       ATGAGGCAGATATCGG
JMSF041I22+           TCTTGATGGGGTTGCAAAGGACCTGAGTGGGCTTGTCGCCCACAATGAGGCAGATATCGG
                      ____________________________________________________________
consensus             TCTTGATGGGGTTGCAAAGGACCTGAGTGGGCTTGTCGCCCACAATGAGGCAGATATCGG
 
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JMSF010E02+           AGAAGGATTGGAGGGGGTGGGGGAGTGGGATTTTGATGGGATTTGATACTGGGGAGAGGT
JMSF041I22+           AGAAGGATTGGAGGGGGTGGGGGAGTGGGATTTTGATGGGATTTGATACTGGGGAGAGGT
                      ____________________________________________________________
consensus             AGAAGGATTGGAGGGGGTGGGGGAGTGGGATTTTGATGGGATTTGATACTGGGGAGAGGT
 
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JMSF010E02+           CTTTGGGTGGGATTTTCTTGAGAGTCAGAACCAGGTAGATCAAATCATCGTTGTCTTCTT
JMSF041I22+           CTTTGGGTGGGATTTTCTTGAGAGTCAGAACCAGGTAGATCAAATCATCGTTGTCTTCTT
                      ____________________________________________________________
consensus             CTTTGGGTGGGATTTTCTTGAGAGTCAGAACCAGGTAGATCAAATCATCGTTGTCTTCTT
 
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JMSF010E02+           CATCTCCTTCTGCGGATTGTCGTGGGGTGGTGGGGCTTTTCCACTGGAGTTTCTTCCATT
JMSF041I22+           CATCTCCTTCTGCGGATTGTCGTGGGGTGGTGGGGCTTTTCCACTGGAGTTTCTTCCATT
                      ____________________________________________________________
consensus             CATCTCCTTCTGCGGATTGTCGTGGGGTGGTGGGGCTTTTCCACTGGAGTTTCTTCCATT
 
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JMSF010E02+           TGAGGAGAGCGTTTACAGCTTTCCTTACTGTTCCTTCGCTCACATTATTATTACCCAGTT
JMSF041I22+           TGAGGAGAGCGTTTACAGCTTTCCTTACTGTTCCTTCGCTCACATTATTATTACCCAGTT
                      ____________________________________________________________
consensus             TGAGGAGAGCGTTTACAGCTTTCCTTACTGTTCCTTCGCTCACATTATTATTACCCAGTT
 
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JMSF010E02+           TCCCTGCCGTAGTGGAAGAAGAATCAGCCATCCTGAGAGAGAAGAAAGCAGCAGTCAGAG
JMSF041I22+           TCCCTGCCGTAGTGGAAGAAGAATCAGCCATCCTGAGAGAGAAGAAAGCAGCAGTCAGAG
                      ____________________________________________________________
consensus             TCCCTGCCGTAGTGGAAGAAGAATCAGCCATCCTGAGAGAGAAGAAAGCAGCAGTCAGAG
 
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JMSF010E02+           GCGGCGCGTGCCTATGCCCTTGGTCTAGGGTTCAACTGCTCAAGGCAAGAGCGGCAAGC 
JMSF041I22+           GCGGCGCGTGCCTATGCCCTTGGTCTAGGGTTCAACTGCTCAAGGCAAGAGCGGCAAGCA
                      ____________________________________________________________
consensus             GCGGCGCGTGCCTATGCCCTTGGTCTAGGGTTCAACTGCTCAAGGCAAGAGCGGCAAGCA