Contig 008011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041D01Sequence603008011 (2)ref|XP_009803360.1|2e-88PREDICTED: quinone oxidoreductase-like protein 2 homolog [Nicotiana sylvestris]764008011 (2)ref|XP_009600683.1|1e-91PREDICTED: quinone oxidoreductase-like protein 2 homolog [Nicotiana tomentosifo

Alignment

This contig is upended


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rJMSF041D01- AACTTGATTATTTTCAAGGGATGTCCTTGGAGCAGTGCTGGCAGG
                      ____________________________________________________________
consensus AACTTGATTATTTTCAAGGGATGTCCTTGGAGCAGTGCTGGCAGG
 
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rJMSF041D01- AGCTCCATGACTACATGGTGAAACATTTGCAGATACATCTGTGCTTCCATGAAAACATCA
                      ____________________________________________________________
consensus AGCTCCATGACTACATGGTGAAACATTTGCAGATACATCTGTGCTTCCATGAAAACATCA
 
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rJMSF041D01- TAAGTAAGACGTTCCGCGTTTCATCTCGAATGTTTACCTAAAGCTTAGATTGCCCGACGG
                      ____________________________________________________________
consensus TAAGTAAGACGTTCCGCGTTTCATCTCGAATGTTTACCTAAAGCTTAGATTGCCCGACGG
 
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rJMSF041D01- TCTTGCCATCGCCAAAAGTAAGCAACACCTTCCCGATCGCCTTCCTATCTTTGAGGGCAG
                      ____________________________________________________________
consensus TCTTGCCATCGCCAAAAGTAAGCAACACCTTCCCGATCGCCTTCCTATCTTTGAGGGCAG
 
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rJMSF041D01- AGAAAGCGAGATTGGCCTCTGATGGGCCGAAAGTATGAGAGATGTTTATGGTAATCAAGC
                      ____________________________________________________________
consensus AGAAAGCGAGATTGGCCTCTGATGGGCCGAAAGTATGAGAGATGTTTATGGTAATCAAGC
 
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rJMSF041D01- CCCTCGACAACCAAGATAATAGCTCGTTGAGAGAATCTTCAAGCACAGCTGGGCGGTGTA
                      ____________________________________________________________
consensus CCCTCGACAACCAAGATAATAGCTCGTTGAGAGAATCTTCAAGCACAGCTGGGCGGTGTA
 
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rJMSF041D01- TCTTATGGCTTCCCCAGTAGAGTCCGTGTATTGTCCAGTTCTTAACGAGAGCAATATTTG
                      ____________________________________________________________
consensus TCTTATGGCTTCCCCAGTAGAGTCCGTGTATTGTCCAGTTCTTAACGAGAGCAATATTTG
 
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rJMSF041D01- CTGGGATGACGGGCACTTGTCCACTCGCAAACCCAATAACCAAAATCTGTGCTCCCCAAT
                      ____________________________________________________________
consensus CTGGGATGACGGGCACTTGTCCACTCGCAAACCCAATAACCAAAATCTGTGCTCCCCAAT
 
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rJMSF041D01- TCAACAGTTTCAAGCTATCTTTCGAAAGCTTTCCCCCTACTGGATCATACAAGACATCAA
                      ____________________________________________________________
consensus TCAACAGTTTCAAGCTATCTTTCGAAAGCTTTCCCCCTACTGGATCATACAAGACATCAA
 
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rJMSF041D01- CCCCCCTGAGCTTTCTTGACTTTAGAAACGCCCTAACATTCTCAATAACGTTATCCTTGC
                      ____________________________________________________________
consensus CCCCCCTGAGCTTTCTTGACTTTAGAAACGCCCTAACATTCTCAATAACGTTATCCTTGC
 
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rJMSF041D01- TCACATCAACTACGTGATCAGCACCCATCGACTTCAAAAAATCCACCTTCTCAGCTCCCC
JMSF041D01+ CCC
                      ____________________________________________________________
consensus TCACATCAACTACGTGATCAGCACCCATCGACTTCAAAAAATCCACCTTCTCAGCTCCCC
 
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rJMSF041D01- TCGCAGCAGCAATAACAGTAGCTCCGCAAACCTTTCCAATCTGTACTGCTGAAACCCCAA
JMSF041D01+ TCGCAGCAGCAATAACAGTAGCTCCGCAAACCTTTCCAATCTGTACTGCTGAAACCCCAA
                      ____________________________________________________________
consensus TCGCAGCAGCAATAACAGTAGCTCCGCAAACCTTTCCAATCTGTACTGCTGAAACCCCAA
 
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rJMSF041D01- CACCTCCAGCTGCTCCAAGAACCAGCAAAACCTGGTTCTGACGCAACTGCGCCCTGTAA
JMSF041D01+ CACCTCCAGCTGCTCCAAGAACCAGCAAAACCTGGTTCTGACGCAACTGCGCCCTGTAAG
                      ____________________________________________________________
consensus CACCTCCAGCTGCTCCAAGAACCAGCAAAACCTGGTTCTGACGCAACTGCGCCCTGTAAG
 
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JMSF041D01+ CTAGGGCTACATGTGATGTTCCATATGCCACAGGAAGTGCAGCAGCCGCAACTAGATCAC
                      ____________________________________________________________
consensus CTAGGGCTACATGTGATGTTCCATATGCCACAGGAAGTGCAGCAGCCGCAACTAGATCAC
 
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JMSF041D01+ AACCATCAGGCACTCGAAACAAATCGGATTCATCGGCGACGATGAATTGGGCAAATGAAC
                      ____________________________________________________________
consensus AACCATCAGGCACTCGAAACAAATCGGATTCATCGGCGACGATGAATTGGGCAAATGAAC
 
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JMSF041D01+ CAAGCGCGGCAAAAGAGCACACACGGTCGCCGACCCTGAATTTAGTGACTTTGGGGCCGA
                      ____________________________________________________________
consensus CAAGCGCGGCAAAAGAGCACACACGGTCGCCGACCCTGAATTTAGTGACTTTGGGGCCGA
 
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JMSF041D01+ CGGCGTCGACGATTCCCGAGTAATCGGAGCCAAGGATGAACGGCAACGGAGGCTTCTCTT
                      ____________________________________________________________
consensus CGGCGTCGACGATTCCCGAGTAATCGGAGCCAAGGATGAACGGCAACGGAGGCTTCTCTT
 
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JMSF041D01+ GGTACAACCCTTGGACTTGCAGGTAATTGGCGAAGTTCAAGCTCGTGGCTTTGACCCGGA
                      ____________________________________________________________
consensus GGTACAACCCTTGGACTTGCAGGTAATTGGCGAAGTTCAAGCTCGTGGCTTTGACCCGGA
 
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JMSF041D01+ CTCGGACTGAGTTCGGCGAGACGAGTTCCGGGATCGGATGGGATGTTGAATAGGTGAGTG
                      ____________________________________________________________
consensus CTCGGACTGAGTTCGGCGAGACGAGTTCCGGGATCGGATGGGATGTTGAATAGGTGAGTG
 
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JMSF041D01+ GAGAATCGTCCGAGTTCGGTCGGATTGTTGGGTCGCCGATCTTTCTGCATACTAAAGCTT
                      ____________________________________________________________
consensus GAGAATCGTCCGAGTTCGGTCGGATTGTTGGGTCGCCGATCTTTCTGCATACTAAAGCTT
 
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JMSF041D01+ CCATTTTTTGTAATCTTTTTCTTGGGAAACGAACAGTGCTATGCTAAGAATTGCTATCTC
                      ____________________________________________________________
consensus CCATTTTTTGTAATCTTTTTCTTGGGAAACGAACAGTGCTATGCTAAGAATTGCTATCTC