Contig 008008:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E15Sequence589008008 (3)ref|XP_009595357.1|102PREDICTED: heparanase-like protein 2 isoform X2 [Nicotiana tomentosiformis]
JMSF033G19Sequence663008008 (3)gb|EYU43518.1|1e-49hypothetical protein MIMGU_mgv1a004063mg [Erythranthe guttata]
JMSF041A12Sequence652008008 (3)gb|EYU43518.1|6e-22hypothetical protein MIMGU_mgv1a004063mg [Erythranthe guttata]660015129ref|XP_009761177.1|1e-45PREDICTED: heparanase-like protein 2 [Nicotiana sylvestris] ref|XP_009761178.1|

Alignment

This contig is upended


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JMSF033G19+                                                             TCTATCCATA
                      ____________________________________________________________
consensus                                                               TCTATCCATA
 
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JMSF033G19+           TGCAAGCATCCATGCGAAAATCCAAACAACCCGTCCTCTTGCTTTCTAAACGGATGGCAA
                      ____________________________________________________________
consensus             TGCAAGCATCCATGCGAAAATCCAAACAACCCGTCCTCTTGCTTTCTAAACGGATGGCAA
 
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JMSF033G19+           GGGATATTCAGATTGCCCACATCGTACACTACTTGGTCTTGCAATGAACCCCCGATTCGT
                      ____________________________________________________________
consensus             GGGATATTCAGATTGCCCACATCGTACACTACTTGGTCTTGCAATGAACCCCCGATTCGT
 
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JMSF033G19+           AACCTCAAACTCTTGAAAGCTTGAACAGAATTTGCCAGAAAAGGGTGAGACAGATCCAGG
JMFF019E15+                         GAAAGCTTGAACAGAATTTGCCAGAAAAGGGTGAGACAGATCCAGG
JMSF041A12+                         GAAAGCTTGAACAGAATTTGCCAGAAAAGGGTGAGACAGATCCAGG
                      ____________________________________________________________
consensus             AACCTCAAACTCTTGAAAGCTTGAACAGAATTTGCCAGAAAAGGGTGAGACAGATCCAGG
 
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JMSF033G19+           TTCATCGCAGATGCTAACCCCCACGGGCATTGGTCATAGTTACACTTGTCGTGAGGCCAC
JMFF019E15+           TTCATCGCAGATGCTAACCCCCACGGGCATTGGTCATAGTTACACTTGTCGTGAGGCCAC
JMSF041A12+           TTCATCGCAGATGCTAACCCCCACGGGCATTGGTCATAGTTACACTTGTCGTGAGGCCAC
                      ____________________________________________________________
consensus             TTCATCGCAGATGCTAACCCCCACGGGCATTGGTCATAGTTACACTTGTCGTGAGGCCAC
 
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JMSF033G19+           CAATCGAGAGTAGCACATATATAATTGGCATCCGTGTCAGCAATCCTTGTCGTTGTATCG
JMFF019E15+           CAATCGAGAGTAGCACATATATAATTGGCATCCGTGTCAGCAATCCTTGTCGTTGTATCG
JMSF041A12+           CAATCGAGAGTAGCACATATATAATTGGCATCCGTGTCAGCAATCCTTGTCGTTGTATCG
                      ____________________________________________________________
consensus             CAATCGAGAGTAGCACATATATAATTGGCATCCGTGTCAGCAATCCTTGTCGTTGTATCG
 
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JMSF033G19+           ATCACAAGCCCCGCATATTCCACTGCCTGACCCGAAAACGCCAGAAAAAGCGCCACAATG
JMFF019E15+           ATCACAAGCCCCGCATATTCCACTGCCTGACCCGAAAACGCCAGAAAAAGCGCCACAATG
JMSF041A12+           ATCACAAGCCCCGCATATTCCACTGCCTGACCCGAAAACGCCAGAAAAAGCGCCACAATG
                      ____________________________________________________________
consensus             ATCACAAGCCCCGCATATTCCACTGCCTGACCCGAAAACGCCAGAAAAAGCGCCACAATG
 
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JMSF033G19+           GTTAACACAAAAGCTAAGAAGCCCATAGGTTTCGATTCCCTCCGCAGCTTAGCCACAAGA
JMFF019E15+           GTTAACACAAAAGCTAAGAAGCCCATAGGTTTCGATTCCCTCCGCAGCTTAGCCACAAGA
JMSF041A12+           GTTAACACAAAAGCTAAGAAGCCCATAGGTTTCGATTCCCTCCGCAGCTTAGCCACAAGA
                      ____________________________________________________________
consensus             GTTAACACAAAAGCTAAGAAGCCCATAGGTTTCGATTCCCTCCGCAGCTTAGCCACAAGA
 
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JMSF033G19+           TGAACTCAAACACTACAAATTCACAATCAATGGCTTGGGTTTCTGTAAAAAAGGAAGCAA
JMFF019E15+           TGAACTCAAACACTACAAATTCACAATCAATGGCTTGGGTTTCTGTAAAAAAGGAAGCAA
JMSF041A12+           TGAACTCAAACACTACAAATTCACAATCAATGGCTTGGGTTTCTGTAAAAAAGGAAGCAA
                      ____________________________________________________________
consensus             TGAACTCAAACACTACAAATTCACAATCAATGGCTTGGGTTTCTGTAAAAAAGGAAGCAA
 
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JMSF033G19+           TAATATAATGTGAAAGTGCGAGATGCGTCTATGCTTAAAGGCAATGTTTTTTTTAGAGAC
JMFF019E15+           TAATATAATGTGAAAGTGCGAGATGCGTCTATGCTTAAAGGCAATGTTTTTTTTAGAGAC
JMSF041A12+           TAATATAATGTGAAAGTGCGAGATGCGTCTATGCTTAAAGGCAATGTTTTTTTTAGAGAC
                      ____________________________________________________________
consensus             TAATATAATGTGAAAGTGCGAGATGCGTCTATGCTTAAAGGCAATGTTTTTTTTAGAGAC
 
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JMSF033G19+           GAAAAAAGACAAGAACATGGCGTAAGAGAAATGGGGGCTGTCTTGAATTTGAGCTGAAGA
JMFF019E15+           GAAAAAAGACAAGAACATGGCGTAAGAGAAATGGGGGCTGTCTTGAATTTGAGCTGAAGA
JMSF041A12+           GAAAAAAGACAAGAACATGGCGTAAGAGAAATGGGGGCTGTCTTGAATTTGAGCTGAAGA
                      ____________________________________________________________
consensus             GAAAAAAGACAAGAACATGGCGTAAGAGAAATGGGGGCTGTCTTGAATTTGAGCTGAAGA
 
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JMSF033G19+           ACATGGGAGCTGATGCTTGTTTGTTTGGATAAGGTGTCGGCATCAAAATCC         
JMFF019E15+           ACATGGGAGCTGATGCTTGTTTGTTTGGATAAGGTGTCGGCATCAAAATCCTAAATCCAC
JMSF041A12+           ACATGGGAGCTGATGCTTGTTTGTTTGGATAAGGTGTCGGCATCAAAATCCTAAATCCAC
                      ____________________________________________________________
consensus             ACATGGGAGCTGATGCTTGTTTGTTTGGATAAGGTGTCGGCATCAAAATCCTAAATCCAC
 
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JMFF019E15+           CCAAGCGTTTGGTACATAAATCCTTTTTGGTAATGGGTAAGGTTCCAACTCCCAATTGCA
JMSF041A12+           CCAAGCGTTTGGTACATAAATCCTTTTTGGTAATGGGTAAGGTTCCAACTCCCAATTGCA
                      ____________________________________________________________
consensus             CCAAGCGTTTGGTACATAAATCCTTTTTGGTAATGGGTAAGGTTCCAACTCCCAATTGCA
 
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JMSF041A12+           GAAGCAAAAATAAAAATCAAACTGGGAAATGATTGAAGCTTCTTTCCAACTTGGTCGCCC
                      ____________________________________________________________
consensus             GAAGCAAAAATAAAAATCAAACTGGGAAATGATTGAAGCTTCTTTCCAACTTGGTCGCCC