Contig 007996:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038M04Sequence618007996 (4)ref|XP_006349714.1|1e-97PREDICTED: BI1-like protein-like [Solanum tuberosum]
JMFS116H06Sequence563007996 (4)ref|XP_006349714.1|3e-84PREDICTED: BI1-like protein-like [Solanum tuberosum]
JMSF039E24Sequence638007996 (4)ref|XP_006349714.1|6e-82PREDICTED: BI1-like protein-like [Solanum tuberosum]894007996 (4)ref|XP_010038064.1|3e-122PREDICTED: BI1-like protein [Eucalyptus grandis] gb|KCW49862.1| hypothetical pro

Alignment

This contig is upended


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rJMSF039E24-          GGCATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCAT
                      ____________________________________________________________
consensus             GGCATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCAT
 
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rJMSF039E24-          CATTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTC
                      ____________________________________________________________
consensus             CATTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTC
 
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rJMSF039E24-          TTCAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGAT
                      ____________________________________________________________
consensus             TTCAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGAT
 
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rJMSF039E24-          GACATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGAT
                      ____________________________________________________________
consensus             GACATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGAT
 
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JMFN038M04+                              ACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
rJMSF039E24-          AAGGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
                      ____________________________________________________________
consensus             AAGGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
 
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JMFS116H06+                                CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
JMFN038M04+           GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
rJMSF039E24-          GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
JMSF039E24+                                CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
                      ____________________________________________________________
consensus             GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
 
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JMFS116H06+           CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
JMFN038M04+           CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
rJMSF039E24-          CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
JMSF039E24+           CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
                      ____________________________________________________________
consensus             CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
 
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JMFS116H06+           CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
JMFN038M04+           CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
rJMSF039E24-          CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
JMSF039E24+           CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
                      ____________________________________________________________
consensus             CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
 
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JMFS116H06+           TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
JMFN038M04+           TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
rJMSF039E24-          TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
JMSF039E24+           TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
                      ____________________________________________________________
consensus             TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
 
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JMFS116H06+           CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
JMFN038M04+           CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
rJMSF039E24-          CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
JMSF039E24+           CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
                      ____________________________________________________________
consensus             CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
 
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JMFS116H06+           GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
JMFN038M04+           GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
rJMSF039E24-          GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
JMSF039E24+           GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
                      ____________________________________________________________
consensus             GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
 
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JMFS116H06+           AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
JMFN038M04+           AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
rJMSF039E24-          AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
JMSF039E24+           AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
                      ____________________________________________________________
consensus             AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
 
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JMFS116H06+           CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
JMFN038M04+           CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
rJMSF039E24-          CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
JMSF039E24+           CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
                      ____________________________________________________________
consensus             CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
 
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JMFS116H06+           CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
JMFN038M04+           CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
rJMSF039E24-          CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCCGGGACTCCTCGTCGCCTTTGT
JMSF039E24+           CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
                      ____________________________________________________________
consensus             CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
 
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JMFS116H06+           ACGCATAGTTCCACATCTCTCCGATCAAA                               
JMFN038M04+           ACGCATAGTTCCACATCTCTCCGATCAAA                               
rJMSF039E24-          ACGCATAGTTCCACATCTCTCCGATCAAA                               
JMSF039E24+           ACGCATAGTTCCACATCTCTCCGATCAAACCAATGTCTTCCTCAATATTCCGATTACTTG
                      ____________________________________________________________
consensus             ACGCATAGTTCCACATCTCTCCGATCAAACCAATGTCTTCCTCAATATTCCGATTACTTG
 
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JMSF039E24+           ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC
                      ____________________________________________________________
consensus             ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC